Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 DDX5-205ENST00000577922 996 ntTSL 522.37■■□□□ 1.172e-7■■■□□ 17.1
XRCC6P12956 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.82e-7■■■□□ 17.1
XRCC6P12956 DDX5-220ENST00000581806 576 ntTSL 418.05■□□□□ 0.482e-7■■■□□ 17.1
XRCC6P12956 DDX5-219ENST00000581697 580 ntTSL 516.83■□□□□ 0.282e-7■■■□□ 17.1
XRCC6P12956 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.17■□□□□ 0.182e-7■■■□□ 17.1
XRCC6P12956 DDX5-207ENST00000578400 575 ntTSL 515.42■□□□□ 0.062e-7■■■□□ 17.1
XRCC6P12956 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC14.01□□□□□ -0.172e-7■■■□□ 17.1
XRCC6P12956 DDX5-218ENST00000581693 2156 ntTSL 513.74□□□□□ -0.212e-7■■■□□ 17.1
XRCC6P12956 DDX5-203ENST00000540698 2225 ntTSL 513.63□□□□□ -0.232e-7■■■□□ 17.1
XRCC6P12956 DDX5-215ENST00000581230 3558 ntTSL 210.59□□□□□ -0.712e-7■■■□□ 17.1
XRCC6P12956 SEMA4C-205ENST00000474420 2625 ntTSL 224.25■■□□□ 1.474e-7■■■□□ 17
XRCC6P12956 SEMA4C-204ENST00000467747 3371 ntTSL 218.55■□□□□ 0.564e-7■■■□□ 17
XRCC6P12956 CASC19-272ENST00000641991 1360 nt13.02□□□□□ -0.332e-6■■■□□ 17
XRCC6P12956 CASC19-230ENST00000641421 1530 ntBASIC12.6□□□□□ -0.392e-6■■■□□ 17
XRCC6P12956 CASC19-229ENST00000641418 1373 ntBASIC11.63□□□□□ -0.552e-6■■■□□ 17
XRCC6P12956 CASC19-247ENST00000641642 1107 nt11.59□□□□□ -0.552e-6■■■□□ 17
XRCC6P12956 CASC19-235ENST00000641496 1154 nt10.68□□□□□ -0.72e-6■■■□□ 17
XRCC6P12956 CASC19-254ENST00000641719 1443 nt10.61□□□□□ -0.712e-6■■■□□ 17
XRCC6P12956 CASC19-263ENST00000641880 1404 nt10.58□□□□□ -0.722e-6■■■□□ 17
XRCC6P12956 CASC19-205ENST00000641013 1411 ntBASIC10.06□□□□□ -0.82e-6■■■□□ 17
XRCC6P12956 CASC19-273ENST00000642010 925 nt9.81□□□□□ -0.842e-6■■■□□ 17
XRCC6P12956 CASC19-283ENST00000642134 870 nt9.39□□□□□ -0.912e-6■■■□□ 17
XRCC6P12956 CASC19-214ENST00000641171 1493 nt9.28□□□□□ -0.922e-6■■■□□ 17
XRCC6P12956 CASC19-212ENST00000641153 1287 ntBASIC9.09□□□□□ -0.952e-6■■■□□ 17
XRCC6P12956 CASC19-252ENST00000641704 1313 nt9.05□□□□□ -0.962e-6■■■□□ 17
XRCC6P12956 CASC19-216ENST00000641179 1140 nt8.99□□□□□ -0.972e-6■■■□□ 17
XRCC6P12956 CASC19-240ENST00000641578 1061 nt8.92□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-220ENST00000641298 974 nt8.91□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-239ENST00000641547 915 nt8.91□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-224ENST00000641362 1146 nt8.91□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-208ENST00000641056 1292 ntBASIC8.91□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-227ENST00000641411 1285 ntBASIC8.91□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-276ENST00000642077 993 nt8.91□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-243ENST00000641588 1546 ntBASIC8.9□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-207ENST00000641029 1047 nt8.9□□□□□ -0.982e-6■■■□□ 17
XRCC6P12956 CASC19-250ENST00000641696 886 nt8.57□□□□□ -1.042e-6■■■□□ 17
XRCC6P12956 CASC19-282ENST00000642126 1206 nt8.57□□□□□ -1.042e-6■■■□□ 17
XRCC6P12956 CASC19-266ENST00000641934 1050 nt8.49□□□□□ -1.052e-6■■■□□ 17
XRCC6P12956 CASC19-232ENST00000641480 1244 ntBASIC8.48□□□□□ -1.052e-6■■■□□ 17
XRCC6P12956 CASC19-257ENST00000641786 816 nt8.45□□□□□ -1.062e-6■■■□□ 17
XRCC6P12956 CASC19-249ENST00000641681 871 nt8.15□□□□□ -1.12e-6■■■□□ 17
XRCC6P12956 CASC19-211ENST00000641106 1184 nt7.88□□□□□ -1.152e-6■■■□□ 17
XRCC6P12956 CASC19-251ENST00000641701 2204 nt7.73□□□□□ -1.172e-6■■■□□ 17
XRCC6P12956 CASC19-218ENST00000641218 1522 nt7.72□□□□□ -1.172e-6■■■□□ 17
XRCC6P12956 CASC19-228ENST00000641414 1684 ntBASIC7.54□□□□□ -1.22e-6■■■□□ 17
XRCC6P12956 CASC19-253ENST00000641706 818 nt7.54□□□□□ -1.22e-6■■■□□ 17
XRCC6P12956 CASC19-260ENST00000641828 2001 ntBASIC7.49□□□□□ -1.212e-6■■■□□ 17
XRCC6P12956 CASC19-245ENST00000641615 770 nt7.47□□□□□ -1.212e-6■■■□□ 17
XRCC6P12956 CASC19-244ENST00000641604 1251 nt7.36□□□□□ -1.232e-6■■■□□ 17
XRCC6P12956 CASC19-246ENST00000641625 1606 ntBASIC7.11□□□□□ -1.272e-6■■■□□ 17
XRCC6P12956 CASC19-274ENST00000642018 970 ntBASIC7.03□□□□□ -1.282e-6■■■□□ 17
XRCC6P12956 CASC19-277ENST00000642082 1545 nt6.85□□□□□ -1.312e-6■■■□□ 17
XRCC6P12956 CASC19-238ENST00000641523 1558 ntBASIC6.76□□□□□ -1.332e-6■■■□□ 17
XRCC6P12956 CASC19-255ENST00000641733 1385 ntBASIC6.73□□□□□ -1.332e-6■■■□□ 17
XRCC6P12956 CASC19-234ENST00000641488 1157 nt6.62□□□□□ -1.352e-6■■■□□ 17
XRCC6P12956 CASC19-237ENST00000641514 1074 nt6.62□□□□□ -1.352e-6■■■□□ 17
XRCC6P12956 CASC19-248ENST00000641674 1356 ntBASIC6.36□□□□□ -1.392e-6■■■□□ 17
XRCC6P12956 CASC19-225ENST00000641365 2219 nt6.17□□□□□ -1.422e-6■■■□□ 17
XRCC6P12956 CASC19-213ENST00000641162 1091 nt6.07□□□□□ -1.442e-6■■■□□ 17
XRCC6P12956 CASC19-233ENST00000641487 966 nt6.06□□□□□ -1.442e-6■■■□□ 17
XRCC6P12956 CASC19-264ENST00000641912 1184 ntBASIC6.06□□□□□ -1.442e-6■■■□□ 17
XRCC6P12956 CASC19-269ENST00000641964 1415 nt6.02□□□□□ -1.452e-6■■■□□ 17
XRCC6P12956 CASC19-204ENST00000641001 2055 ntBASIC5.97□□□□□ -1.452e-6■■■□□ 17
XRCC6P12956 CASC19-267ENST00000641944 1117 nt5.94□□□□□ -1.462e-6■■■□□ 17
XRCC6P12956 CASC19-221ENST00000641309 1382 ntBASIC5.87□□□□□ -1.472e-6■■■□□ 17
XRCC6P12956 CASC19-281ENST00000642118 1554 ntBASIC5.66□□□□□ -1.52e-6■■■□□ 17
XRCC6P12956 CASC19-222ENST00000641321 1173 ntBASIC5.62□□□□□ -1.512e-6■■■□□ 17
XRCC6P12956 CASC19-284ENST00000642142 1868 ntBASIC5.32□□□□□ -1.562e-6■■■□□ 17
XRCC6P12956 CASC19-215ENST00000641174 959 nt5.22□□□□□ -1.572e-6■■■□□ 17
XRCC6P12956 CASC19-256ENST00000641746 958 nt5.18□□□□□ -1.582e-6■■■□□ 17
XRCC6P12956 CASC19-231ENST00000641425 1156 nt5.09□□□□□ -1.592e-6■■■□□ 17
XRCC6P12956 CASC19-262ENST00000641867 866 nt4.36□□□□□ -1.712e-6■■■□□ 17
XRCC6P12956 CASC19-209ENST00000641060 679 nt4.15□□□□□ -1.752e-6■■■□□ 17
XRCC6P12956 CASC19-280ENST00000642102 1351 ntBASIC4.02□□□□□ -1.772e-6■■■□□ 17
XRCC6P12956 CASC19-217ENST00000641187 875 nt3.17□□□□□ -1.92e-6■■■□□ 17
XRCC6P12956 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.276e-10■■■□□ 17
XRCC6P12956 RPL22-207ENST00000484532 449 ntTSL 2 BASIC10.6□□□□□ -0.716e-10■■■□□ 17
XRCC6P12956 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.542e-7■■■□□ 17
XRCC6P12956 ELL2-203ENST00000506628 520 ntTSL 522.9■■□□□ 1.262e-7■■■□□ 17
XRCC6P12956 GMDS-201ENST00000380805 1743 ntTSL 222.77■■□□□ 1.244e-6■■■□□ 17
XRCC6P12956 ELL2-206ENST00000513343 582 ntTSL 322.6■■□□□ 1.212e-7■■■□□ 17
XRCC6P12956 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.982e-7■■■□□ 17
XRCC6P12956 C10orf76-205ENST00000495001 2464 ntTSL 218.95■□□□□ 0.622e-10■■■□□ 17
XRCC6P12956 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.392e-7■■■□□ 17
XRCC6P12956 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.152e-10■■■□□ 17
XRCC6P12956 NRIP1-205ENST00000637630 573 ntTSL 313.68□□□□□ -0.222e-7■■■□□ 17
XRCC6P12956 NRIP1-207ENST00000638122 543 ntTSL 1 (best)13.41□□□□□ -0.262e-7■■■□□ 17
XRCC6P12956 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.352e-7■■■□□ 17
XRCC6P12956 NRIP1-206ENST00000637963 498 ntTSL 411.35□□□□□ -0.592e-7■■■□□ 17
XRCC6P12956 GMDS-209ENST00000531690 515 ntTSL 57.5□□□□□ -1.214e-6■■■□□ 17
XRCC6P12956 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.262e-7■■■□□ 17
XRCC6P12956 ELL2-208ENST00000635633 467 ntTSL 36.42□□□□□ -1.382e-7■■■□□ 17
XRCC6P12956 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.382e-7■■■□□ 17
XRCC6P12956 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.52e-7■■■□□ 17
XRCC6P12956 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.622e-7■■■□□ 17
XRCC6P12956 ELL2-204ENST00000508694 743 ntTSL 54.84□□□□□ -1.632e-7■■■□□ 17
XRCC6P12956 AC024267.1-201ENST00000582320 895 ntBASIC18.24■□□□□ 0.519e-15■■■□□ 17
XRCC6P12956 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.733e-9■■■□□ 16.9
XRCC6P12956 TMEM165-205ENST00000508404 1657 ntTSL 225.52■■□□□ 1.683e-9■■■□□ 16.9
XRCC6P12956 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.31■■□□□ 1.643e-9■■■□□ 16.9
Retrieved 100 of 6,788 protein–RNA pairs in 127.2 ms