RNA–Protein interactions for RNA: ENST00000641496.1

CASC19-235, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,154 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-235ENST00000641496 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
CASC19-235ENST00000641496 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
CASC19-235ENST00000641496 ABCC9O60706 1549 aa21.02■□□□□ 0.96
CASC19-235ENST00000641496 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
CASC19-235ENST00000641496 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
CASC19-235ENST00000641496 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
CASC19-235ENST00000641496 NACADO15069 1562 aa19.96■□□□□ 0.79
CASC19-235ENST00000641496 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
CASC19-235ENST00000641496 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
CASC19-235ENST00000641496 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
CASC19-235ENST00000641496 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
CASC19-235ENST00000641496 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
CASC19-235ENST00000641496 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
CASC19-235ENST00000641496 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
CASC19-235ENST00000641496 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
CASC19-235ENST00000641496 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
CASC19-235ENST00000641496 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
CASC19-235ENST00000641496 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
CASC19-235ENST00000641496 CC2D2AQ9P2K1 1620 aa18.98■□□□□ 0.63
CASC19-235ENST00000641496 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
CASC19-235ENST00000641496 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
CASC19-235ENST00000641496 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
CASC19-235ENST00000641496 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
CASC19-235ENST00000641496 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
CASC19-235ENST00000641496 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
CASC19-235ENST00000641496 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
CASC19-235ENST00000641496 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
CASC19-235ENST00000641496 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
CASC19-235ENST00000641496 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
CASC19-235ENST00000641496 WIZO95785 1651 aa18.18■□□□□ 0.5
CASC19-235ENST00000641496 NESP48681 1621 aa18.16■□□□□ 0.5
CASC19-235ENST00000641496 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
CASC19-235ENST00000641496 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
CASC19-235ENST00000641496 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
CASC19-235ENST00000641496 CUX2O14529 1486 aa17.92■□□□□ 0.46
CASC19-235ENST00000641496 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
CASC19-235ENST00000641496 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
CASC19-235ENST00000641496 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
CASC19-235ENST00000641496 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
CASC19-235ENST00000641496 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
CASC19-235ENST00000641496 CFTRP13569 1480 aa17.75■□□□□ 0.43
CASC19-235ENST00000641496 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
CASC19-235ENST00000641496 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
CASC19-235ENST00000641496 MRC2Q9UBG0 1479 aa17.71■□□□□ 0.43
CASC19-235ENST00000641496 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
CASC19-235ENST00000641496 WDR62O43379 1518 aa17.66■□□□□ 0.42
CASC19-235ENST00000641496 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
CASC19-235ENST00000641496 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
CASC19-235ENST00000641496 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.41
CASC19-235ENST00000641496 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
CASC19-235ENST00000641496 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
CASC19-235ENST00000641496 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
CASC19-235ENST00000641496 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
CASC19-235ENST00000641496 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
CASC19-235ENST00000641496 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
CASC19-235ENST00000641496 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
CASC19-235ENST00000641496 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
CASC19-235ENST00000641496 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
CASC19-235ENST00000641496 CUX1P39880 1505 aa17.24■□□□□ 0.35
CASC19-235ENST00000641496 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
CASC19-235ENST00000641496 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
CASC19-235ENST00000641496 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.343e-6■■■■□ 24.7
CASC19-235ENST00000641496 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
CASC19-235ENST00000641496 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
CASC19-235ENST00000641496 SOGA1O94964 1423 aa17.17■□□□□ 0.34
CASC19-235ENST00000641496 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
CASC19-235ENST00000641496 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
CASC19-235ENST00000641496 CHD1O14646 1710 aa17.09■□□□□ 0.33
CASC19-235ENST00000641496 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
CASC19-235ENST00000641496 SYNJ1O43426 1573 aa17.03■□□□□ 0.32
CASC19-235ENST00000641496 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
CASC19-235ENST00000641496 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
CASC19-235ENST00000641496 FBLN2P98095 1184 aa17.02■□□□□ 0.32
CASC19-235ENST00000641496 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
CASC19-235ENST00000641496 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
CASC19-235ENST00000641496 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
CASC19-235ENST00000641496 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
CASC19-235ENST00000641496 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
CASC19-235ENST00000641496 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
CASC19-235ENST00000641496 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
CASC19-235ENST00000641496 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
CASC19-235ENST00000641496 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
CASC19-235ENST00000641496 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
CASC19-235ENST00000641496 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.3
CASC19-235ENST00000641496 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
CASC19-235ENST00000641496 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
CASC19-235ENST00000641496 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
CASC19-235ENST00000641496 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
CASC19-235ENST00000641496 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
CASC19-235ENST00000641496 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
CASC19-235ENST00000641496 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
CASC19-235ENST00000641496 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
CASC19-235ENST00000641496 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
CASC19-235ENST00000641496 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
CASC19-235ENST00000641496 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
CASC19-235ENST00000641496 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
CASC19-235ENST00000641496 NUP160Q12769 1436 aa16.7■□□□□ 0.26
CASC19-235ENST00000641496 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
CASC19-235ENST00000641496 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
CASC19-235ENST00000641496 IGF1RP08069 1367 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms