RNA–Protein interactions for RNA: ENST00000641514.1

CASC19-237, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,074 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-237ENST00000641514 AEBP2Q6ZN18 517 aaPredicted RBP30.5■■■□□ 2.47
CASC19-237ENST00000641514 CHIC1Q5VXU3 224 aa28.61■■■□□ 2.17
CASC19-237ENST00000641514 SENP3Q9H4L4 574 aaPredicted RBP25.94■■□□□ 1.74
CASC19-237ENST00000641514 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
CASC19-237ENST00000641514 FOXD1Q16676 465 aa24.29■■□□□ 1.48
CASC19-237ENST00000641514 POTEDQ86YR6 584 aa22.78■■□□□ 1.24
CASC19-237ENST00000641514 MSH5O43196 834 aa22.75■■□□□ 1.23
CASC19-237ENST00000641514 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
CASC19-237ENST00000641514 PIAS4Q8N2W9 510 aaPredicted RBP22.61■■□□□ 1.21
CASC19-237ENST00000641514 PPP6R1Q9UPN7 881 aa22.55■■□□□ 1.2
CASC19-237ENST00000641514 ADRA2BP18089 450 aa22.45■■□□□ 1.18
CASC19-237ENST00000641514 MAPK8IP2Q13387 824 aaPredicted RBP20.74■□□□□ 0.91
CASC19-237ENST00000641514 DMRT2Q9Y5R5 561 aa20.55■□□□□ 0.88
CASC19-237ENST00000641514 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
CASC19-237ENST00000641514 PPP4R3CPQ6ZMV5 832 aa19.91■□□□□ 0.78
CASC19-237ENST00000641514 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
CASC19-237ENST00000641514 CACNB1Q02641 598 aaPredicted RBP19.76■□□□□ 0.75
CASC19-237ENST00000641514 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
CASC19-237ENST00000641514 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
CASC19-237ENST00000641514 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
CASC19-237ENST00000641514 RNF39Q9H2S5 420 aa19.43■□□□□ 0.7
CASC19-237ENST00000641514 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
CASC19-237ENST00000641514 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
CASC19-237ENST00000641514 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
CASC19-237ENST00000641514 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
CASC19-237ENST00000641514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.6
CASC19-237ENST00000641514 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
CASC19-237ENST00000641514 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
CASC19-237ENST00000641514 KCNA4P22459 653 aa18.21■□□□□ 0.51
CASC19-237ENST00000641514 CAPN15O75808 1086 aa18.17■□□□□ 0.5
CASC19-237ENST00000641514 DSG3P32926 999 aa18.12■□□□□ 0.49
CASC19-237ENST00000641514 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
CASC19-237ENST00000641514 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
CASC19-237ENST00000641514 POTEHQ6S545 545 aa17.78■□□□□ 0.44
CASC19-237ENST00000641514 ABCB7O75027 752 aa17.77■□□□□ 0.44
CASC19-237ENST00000641514 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
CASC19-237ENST00000641514 APLP2Q06481 763 aa17.68■□□□□ 0.42
CASC19-237ENST00000641514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
CASC19-237ENST00000641514 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
CASC19-237ENST00000641514 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
CASC19-237ENST00000641514 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
CASC19-237ENST00000641514 POLA2Q14181 598 aa17.28■□□□□ 0.36
CASC19-237ENST00000641514 RBM42Q9BTD8 480 aaKnown RBP17.21■□□□□ 0.35
CASC19-237ENST00000641514 SLC4A1APQ9BWU0 796 aaKnown RBP17.09■□□□□ 0.33
CASC19-237ENST00000641514 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
CASC19-237ENST00000641514 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
CASC19-237ENST00000641514 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
CASC19-237ENST00000641514 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
CASC19-237ENST00000641514 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
CASC19-237ENST00000641514 ZBTB22O15209 634 aa16.76■□□□□ 0.27
CASC19-237ENST00000641514 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
CASC19-237ENST00000641514 REM2Q8IYK8 340 aaPredicted RBP16.68■□□□□ 0.26
CASC19-237ENST00000641514 PIP4P2Q8N4L2 257 aa16.58■□□□□ 0.24
CASC19-237ENST00000641514 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
CASC19-237ENST00000641514 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
CASC19-237ENST00000641514 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
CASC19-237ENST00000641514 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
CASC19-237ENST00000641514 HAX1O00165 279 aa16.36■□□□□ 0.21
CASC19-237ENST00000641514 FBLN2P98095 1184 aa16.3■□□□□ 0.2
CASC19-237ENST00000641514 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
CASC19-237ENST00000641514 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
CASC19-237ENST00000641514 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
CASC19-237ENST00000641514 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
CASC19-237ENST00000641514 EVX2Q03828 476 aa16.2■□□□□ 0.18
CASC19-237ENST00000641514 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
CASC19-237ENST00000641514 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
CASC19-237ENST00000641514 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
CASC19-237ENST00000641514 SPDYE1Q8NFV5 336 aaPredicted RBP16.07■□□□□ 0.16
CASC19-237ENST00000641514 SSUH2Q9Y2M2 353 aa16.06■□□□□ 0.16
CASC19-237ENST00000641514 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
CASC19-237ENST00000641514 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
CASC19-237ENST00000641514 C19orf67A6NJJ6 358 aa15.89■□□□□ 0.13
CASC19-237ENST00000641514 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
CASC19-237ENST00000641514 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
CASC19-237ENST00000641514 GABBR2O75899 941 aa15.76■□□□□ 0.11
CASC19-237ENST00000641514 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
CASC19-237ENST00000641514 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
CASC19-237ENST00000641514 CD44P16070 742 aaKnown RBP15.55■□□□□ 0.08
CASC19-237ENST00000641514 LHX8Q68G74 356 aa15.51■□□□□ 0.07
CASC19-237ENST00000641514 POTEIP0CG38 1075 aa15.45■□□□□ 0.06
CASC19-237ENST00000641514 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
CASC19-237ENST00000641514 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
CASC19-237ENST00000641514 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
CASC19-237ENST00000641514 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
CASC19-237ENST00000641514 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
CASC19-237ENST00000641514 CLCN6P51797 869 aa15.26■□□□□ 0.03
CASC19-237ENST00000641514 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
CASC19-237ENST00000641514 DCBLD2Q96PD2 775 aa15.25■□□□□ 0.03
CASC19-237ENST00000641514 GALR2O43603 387 aaPredicted RBP15.17■□□□□ 0.02
CASC19-237ENST00000641514 ABCC9O60706 1549 aa15.1■□□□□ 0.01
CASC19-237ENST00000641514 PHF12Q96QT6 1004 aa15.09■□□□□ 0.01
CASC19-237ENST00000641514 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
CASC19-237ENST00000641514 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
CASC19-237ENST00000641514 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
CASC19-237ENST00000641514 POTEB2H3BUK9 544 aa14.96□□□□□ -0.01
CASC19-237ENST00000641514 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
CASC19-237ENST00000641514 OTUD5Q96G74 571 aa14.92□□□□□ -0.02
CASC19-237ENST00000641514 MS4A3Q96HJ5 214 aa14.86□□□□□ -0.03
CASC19-237ENST00000641514 PROM2Q8N271 834 aa14.84□□□□□ -0.03
CASC19-237ENST00000641514 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms