RNA–Protein interactions for RNA: ENST00000371998.7

NCOA3-202, Transcript of nuclear receptor coactivator 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA3, Length 4,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3-202ENST00000371998 NISCHQ9Y2I1 1504 aa15.26■□□□□ 0.03
NCOA3-202ENST00000371998 CCDC180Q9P1Z9 1646 aa13.67□□□□□ -0.22
NCOA3-202ENST00000371998 ABCC9O60706 1549 aa13.22□□□□□ -0.29
NCOA3-202ENST00000371998 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
NCOA3-202ENST00000371998 NACADO15069 1562 aa12.84□□□□□ -0.35
NCOA3-202ENST00000371998 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
NCOA3-202ENST00000371998 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
NCOA3-202ENST00000371998 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
NCOA3-202ENST00000371998 DCAF8L2P0C7V8 631 aa12.62□□□□□ -0.39
NCOA3-202ENST00000371998 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
NCOA3-202ENST00000371998 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
NCOA3-202ENST00000371998 BICRAQ9NZM4 1560 aa12.37□□□□□ -0.43
NCOA3-202ENST00000371998 SCRIBQ14160 1630 aa12.34□□□□□ -0.43
NCOA3-202ENST00000371998 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
NCOA3-202ENST00000371998 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
NCOA3-202ENST00000371998 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
NCOA3-202ENST00000371998 CC2D2AQ9P2K1 1620 aa12.02□□□□□ -0.49
NCOA3-202ENST00000371998 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
NCOA3-202ENST00000371998 BAZ1AQ9NRL2 1556 aaPredicted RBP11.87□□□□□ -0.51
NCOA3-202ENST00000371998 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
NCOA3-202ENST00000371998 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
NCOA3-202ENST00000371998 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
NCOA3-202ENST00000371998 PEG3Q9GZU2 1588 aa11.79□□□□□ -0.52
NCOA3-202ENST00000371998 HMGXB3Q12766 1538 aa11.78□□□□□ -0.52
NCOA3-202ENST00000371998 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
NCOA3-202ENST00000371998 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
NCOA3-202ENST00000371998 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
NCOA3-202ENST00000371998 WIZO95785 1651 aa11.65□□□□□ -0.55
NCOA3-202ENST00000371998 RSF1Q96T23 1441 aaPredicted RBP11.58□□□□□ -0.56
NCOA3-202ENST00000371998 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
NCOA3-202ENST00000371998 LAMC3Q9Y6N6 1575 aa11.53□□□□□ -0.56
NCOA3-202ENST00000371998 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
NCOA3-202ENST00000371998 PDS5BQ9NTI5 1447 aa11.45□□□□□ -0.58
NCOA3-202ENST00000371998 CADPSQ9ULU8 1353 aa11.44□□□□□ -0.58
NCOA3-202ENST00000371998 CUX2O14529 1486 aa11.43□□□□□ -0.58
NCOA3-202ENST00000371998 NESP48681 1621 aa11.41□□□□□ -0.58
NCOA3-202ENST00000371998 CFTRP13569 1480 aa11.38□□□□□ -0.59
NCOA3-202ENST00000371998 THOC2Q8NI27 1593 aaKnown RBP11.34□□□□□ -0.59
NCOA3-202ENST00000371998 KIF21AQ7Z4S6 1674 aa11.34□□□□□ -0.59
NCOA3-202ENST00000371998 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
NCOA3-202ENST00000371998 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
NCOA3-202ENST00000371998 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
NCOA3-202ENST00000371998 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
NCOA3-202ENST00000371998 FANCD2Q9BXW9 1451 aa11.3□□□□□ -0.6
NCOA3-202ENST00000371998 WDR62O43379 1518 aa11.28□□□□□ -0.6
NCOA3-202ENST00000371998 ABCC8Q09428 1581 aa11.22□□□□□ -0.61
NCOA3-202ENST00000371998 SUPT5HO00267 1087 aaKnown RBP11.18□□□□□ -0.62
NCOA3-202ENST00000371998 URB2Q14146 1524 aaKnown RBP11.16□□□□□ -0.62
NCOA3-202ENST00000371998 DNMBPQ6XZF7 1577 aa11.14□□□□□ -0.63
NCOA3-202ENST00000371998 TOPBP1Q92547 1522 aa11.11□□□□□ -0.63
NCOA3-202ENST00000371998 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
NCOA3-202ENST00000371998 WDR97A6NE52 1622 aa11.05□□□□□ -0.64
NCOA3-202ENST00000371998 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
NCOA3-202ENST00000371998 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
NCOA3-202ENST00000371998 TARBP1Q13395 1621 aaKnown RBP11□□□□□ -0.65
NCOA3-202ENST00000371998 CUX1P39880 1505 aa11□□□□□ -0.65
NCOA3-202ENST00000371998 FGD5Q6ZNL6 1462 aa10.97□□□□□ -0.65
NCOA3-202ENST00000371998 SOGA1O94964 1423 aa10.97□□□□□ -0.65
NCOA3-202ENST00000371998 SYNJ1O43426 1573 aa10.97□□□□□ -0.65
NCOA3-202ENST00000371998 EIF4G3O43432 1585 aaKnown RBP10.96□□□□□ -0.65
NCOA3-202ENST00000371998 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.65
NCOA3-202ENST00000371998 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
NCOA3-202ENST00000371998 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
NCOA3-202ENST00000371998 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
NCOA3-202ENST00000371998 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
NCOA3-202ENST00000371998 RAD54L2Q9Y4B4 1467 aa10.91□□□□□ -0.66
NCOA3-202ENST00000371998 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
NCOA3-202ENST00000371998 AQRO60306 1485 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■■□ 23.7
NCOA3-202ENST00000371998 GRIN2BQ13224 1484 aa10.88□□□□□ -0.67
NCOA3-202ENST00000371998 MAGI1Q96QZ7 1491 aaPredicted RBP10.88□□□□□ -0.67
NCOA3-202ENST00000371998 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
NCOA3-202ENST00000371998 GAPVD1Q14C86 1478 aa10.85□□□□□ -0.67
NCOA3-202ENST00000371998 TDRD9Q8NDG6 1382 aaKnown RBP10.85□□□□□ -0.67
NCOA3-202ENST00000371998 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
NCOA3-202ENST00000371998 SNAPC4Q5SXM2 1469 aa10.83□□□□□ -0.68
NCOA3-202ENST00000371998 SYNJ2O15056 1496 aa10.82□□□□□ -0.68
NCOA3-202ENST00000371998 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
NCOA3-202ENST00000371998 CHD1O14646 1710 aa10.81□□□□□ -0.68
NCOA3-202ENST00000371998 CHMP7Q8WUX9 453 aaPredicted RBP10.77□□□□□ -0.68
NCOA3-202ENST00000371998 ADAMTS12P58397 1594 aa10.76□□□□□ -0.69
NCOA3-202ENST00000371998 RUSC2Q8N2Y8 1516 aa10.76□□□□□ -0.69
NCOA3-202ENST00000371998 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
NCOA3-202ENST00000371998 KIF27Q86VH2 1401 aa10.75□□□□□ -0.69
NCOA3-202ENST00000371998 FBLN2P98095 1184 aa10.74□□□□□ -0.69
NCOA3-202ENST00000371998 CLASP1Q7Z460 1538 aa10.73□□□□□ -0.69
NCOA3-202ENST00000371998 GRIN2AQ12879 1464 aa10.72□□□□□ -0.69
NCOA3-202ENST00000371998 CUL7Q14999 1698 aa10.72□□□□□ -0.69
NCOA3-202ENST00000371998 RIMBP3CA6NJZ7 1639 aa10.7□□□□□ -0.7
NCOA3-202ENST00000371998 RIMBP3BA6NNM3 1639 aa10.7□□□□□ -0.7
NCOA3-202ENST00000371998 RIMBP3Q9UFD9 1639 aa10.7□□□□□ -0.7
NCOA3-202ENST00000371998 ARHGEF11O15085 1522 aa10.69□□□□□ -0.7
NCOA3-202ENST00000371998 NUP160Q12769 1436 aa10.69□□□□□ -0.7
NCOA3-202ENST00000371998 IGF1RP08069 1367 aa10.65□□□□□ -0.7
NCOA3-202ENST00000371998 CEP170Q5SW79 1584 aa10.64□□□□□ -0.71
NCOA3-202ENST00000371998 TRIM41Q8WV44 630 aa10.64□□□□□ -0.71
NCOA3-202ENST00000371998 CHIC1Q5VXU3 224 aa10.63□□□□□ -0.71
NCOA3-202ENST00000371998 SHROOM2Q13796 1616 aa10.62□□□□□ -0.71
NCOA3-202ENST00000371998 CARMIL1Q5VZK9 1371 aa10.61□□□□□ -0.71
NCOA3-202ENST00000371998 KIAA0586Q9BVV6 1533 aa10.59□□□□□ -0.71
NCOA3-202ENST00000371998 EEA1Q15075 1411 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms