RNA–Protein interactions for RNA: ENST00000641880.1

CASC19-263, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,404 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-263ENST00000641880 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
CASC19-263ENST00000641880 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
CASC19-263ENST00000641880 NISCHQ9Y2I1 1504 aa21.05■□□□□ 0.96
CASC19-263ENST00000641880 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
CASC19-263ENST00000641880 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
CASC19-263ENST00000641880 CCDC180Q9P1Z9 1646 aa18.42■□□□□ 0.54
CASC19-263ENST00000641880 ZCCHC6Q5VYS8 1495 aaKnown RBP17.67■□□□□ 0.42
CASC19-263ENST00000641880 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
CASC19-263ENST00000641880 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
CASC19-263ENST00000641880 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
CASC19-263ENST00000641880 FOXD1Q16676 465 aa17.29■□□□□ 0.36
CASC19-263ENST00000641880 ABCC9O60706 1549 aa17.28■□□□□ 0.36
CASC19-263ENST00000641880 NACADO15069 1562 aa17.2■□□□□ 0.34
CASC19-263ENST00000641880 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
CASC19-263ENST00000641880 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
CASC19-263ENST00000641880 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
CASC19-263ENST00000641880 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
CASC19-263ENST00000641880 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
CASC19-263ENST00000641880 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
CASC19-263ENST00000641880 ADRA2BP18089 450 aa16.45■□□□□ 0.22
CASC19-263ENST00000641880 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
CASC19-263ENST00000641880 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
CASC19-263ENST00000641880 BICRAQ9NZM4 1560 aa16.36■□□□□ 0.21
CASC19-263ENST00000641880 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
CASC19-263ENST00000641880 MSH5O43196 834 aa16.3■□□□□ 0.2
CASC19-263ENST00000641880 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
CASC19-263ENST00000641880 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
CASC19-263ENST00000641880 CECR2Q9BXF3 1484 aa16.24■□□□□ 0.19
CASC19-263ENST00000641880 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
CASC19-263ENST00000641880 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
CASC19-263ENST00000641880 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
CASC19-263ENST00000641880 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
CASC19-263ENST00000641880 WIZO95785 1651 aa16.01■□□□□ 0.15
CASC19-263ENST00000641880 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
CASC19-263ENST00000641880 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
CASC19-263ENST00000641880 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
CASC19-263ENST00000641880 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
CASC19-263ENST00000641880 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
CASC19-263ENST00000641880 BAZ1BQ9UIG0 1483 aaKnown RBP15.86■□□□□ 0.13
CASC19-263ENST00000641880 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
CASC19-263ENST00000641880 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
CASC19-263ENST00000641880 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
CASC19-263ENST00000641880 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
CASC19-263ENST00000641880 CFTRP13569 1480 aa15.47■□□□□ 0.07
CASC19-263ENST00000641880 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
CASC19-263ENST00000641880 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
CASC19-263ENST00000641880 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
CASC19-263ENST00000641880 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
CASC19-263ENST00000641880 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
CASC19-263ENST00000641880 EEA1Q15075 1411 aa15.3■□□□□ 0.04
CASC19-263ENST00000641880 PDS5BQ9NTI5 1447 aa15.25■□□□□ 0.03
CASC19-263ENST00000641880 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
CASC19-263ENST00000641880 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
CASC19-263ENST00000641880 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
CASC19-263ENST00000641880 SYNJ1O43426 1573 aa15.2■□□□□ 0.02
CASC19-263ENST00000641880 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
CASC19-263ENST00000641880 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
CASC19-263ENST00000641880 CUX1P39880 1505 aa15.13■□□□□ 0.01
CASC19-263ENST00000641880 NESP48681 1621 aa15.11■□□□□ 0.01
CASC19-263ENST00000641880 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
CASC19-263ENST00000641880 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
CASC19-263ENST00000641880 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
CASC19-263ENST00000641880 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
CASC19-263ENST00000641880 SOGA1O94964 1423 aa15.07■□□□□ 0
CASC19-263ENST00000641880 KIF27Q86VH2 1401 aa15.06■□□□□ 0
CASC19-263ENST00000641880 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
CASC19-263ENST00000641880 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
CASC19-263ENST00000641880 TOPBP1Q92547 1522 aa15.03■□□□□ -0
CASC19-263ENST00000641880 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
CASC19-263ENST00000641880 GOLGA3Q08378 1498 aa14.97□□□□□ -0.01
CASC19-263ENST00000641880 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
CASC19-263ENST00000641880 KIF21BO75037 1637 aa14.96□□□□□ -0.01
CASC19-263ENST00000641880 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
CASC19-263ENST00000641880 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.02
CASC19-263ENST00000641880 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
CASC19-263ENST00000641880 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
CASC19-263ENST00000641880 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
CASC19-263ENST00000641880 ABCA10Q8WWZ4 1543 aa14.95□□□□□ -0.02
CASC19-263ENST00000641880 TNIKQ9UKE5 1360 aa14.94□□□□□ -0.02
CASC19-263ENST00000641880 CUX2O14529 1486 aa14.93□□□□□ -0.02
CASC19-263ENST00000641880 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
CASC19-263ENST00000641880 ERICH3Q5RHP9 1530 aa14.91□□□□□ -0.02
CASC19-263ENST00000641880 UBTFP17480 764 aaKnown RBP14.9□□□□□ -0.02
CASC19-263ENST00000641880 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
CASC19-263ENST00000641880 WDR62O43379 1518 aa14.87□□□□□ -0.03
CASC19-263ENST00000641880 IGF1RP08069 1367 aa14.85□□□□□ -0.03
CASC19-263ENST00000641880 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
CASC19-263ENST00000641880 IFT140Q96RY7 1462 aa14.83□□□□□ -0.03
CASC19-263ENST00000641880 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
CASC19-263ENST00000641880 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
CASC19-263ENST00000641880 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
CASC19-263ENST00000641880 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
CASC19-263ENST00000641880 CUL7Q14999 1698 aa14.79□□□□□ -0.04
CASC19-263ENST00000641880 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
CASC19-263ENST00000641880 GAPVD1Q14C86 1478 aa14.78□□□□□ -0.04
CASC19-263ENST00000641880 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
CASC19-263ENST00000641880 TARBP1Q13395 1621 aaKnown RBP14.78□□□□□ -0.04
CASC19-263ENST00000641880 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
CASC19-263ENST00000641880 ABCA5Q8WWZ7 1642 aa14.76□□□□□ -0.05
CASC19-263ENST00000641880 KCNA4P22459 653 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms