RNA–Protein interactions for RNA: ENST00000641425.1

CASC19-231, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,156 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-231ENST00000641425 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CASC19-231ENST00000641425 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
CASC19-231ENST00000641425 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
CASC19-231ENST00000641425 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
CASC19-231ENST00000641425 FOXD1Q16676 465 aa16.36■□□□□ 0.21
CASC19-231ENST00000641425 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
CASC19-231ENST00000641425 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
CASC19-231ENST00000641425 MSH5O43196 834 aa15.48■□□□□ 0.07
CASC19-231ENST00000641425 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
CASC19-231ENST00000641425 ADRA2BP18089 450 aa15.42■□□□□ 0.06
CASC19-231ENST00000641425 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
CASC19-231ENST00000641425 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
CASC19-231ENST00000641425 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
CASC19-231ENST00000641425 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
CASC19-231ENST00000641425 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
CASC19-231ENST00000641425 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
CASC19-231ENST00000641425 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
CASC19-231ENST00000641425 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
CASC19-231ENST00000641425 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
CASC19-231ENST00000641425 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
CASC19-231ENST00000641425 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
CASC19-231ENST00000641425 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
CASC19-231ENST00000641425 KCNA4P22459 653 aa13.2□□□□□ -0.3
CASC19-231ENST00000641425 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
CASC19-231ENST00000641425 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
CASC19-231ENST00000641425 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
CASC19-231ENST00000641425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
CASC19-231ENST00000641425 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
CASC19-231ENST00000641425 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
CASC19-231ENST00000641425 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
CASC19-231ENST00000641425 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
CASC19-231ENST00000641425 CAPN15O75808 1086 aa12.36□□□□□ -0.43
CASC19-231ENST00000641425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
CASC19-231ENST00000641425 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
CASC19-231ENST00000641425 POTEHQ6S545 545 aa12.28□□□□□ -0.44
CASC19-231ENST00000641425 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
CASC19-231ENST00000641425 DSG3P32926 999 aa12.25□□□□□ -0.45
CASC19-231ENST00000641425 APLP2Q06481 763 aa12.25□□□□□ -0.45
CASC19-231ENST00000641425 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
CASC19-231ENST00000641425 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
CASC19-231ENST00000641425 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
CASC19-231ENST00000641425 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
CASC19-231ENST00000641425 ZBTB22O15209 634 aa12.14□□□□□ -0.47
CASC19-231ENST00000641425 ABCB7O75027 752 aa12.1□□□□□ -0.47
CASC19-231ENST00000641425 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
CASC19-231ENST00000641425 POLA2Q14181 598 aa11.93□□□□□ -0.5
CASC19-231ENST00000641425 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
CASC19-231ENST00000641425 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
CASC19-231ENST00000641425 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
CASC19-231ENST00000641425 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
CASC19-231ENST00000641425 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
CASC19-231ENST00000641425 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
CASC19-231ENST00000641425 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
CASC19-231ENST00000641425 FBLN2P98095 1184 aa11.47□□□□□ -0.57
CASC19-231ENST00000641425 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
CASC19-231ENST00000641425 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
CASC19-231ENST00000641425 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
CASC19-231ENST00000641425 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
CASC19-231ENST00000641425 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
CASC19-231ENST00000641425 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
CASC19-231ENST00000641425 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
CASC19-231ENST00000641425 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
CASC19-231ENST00000641425 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
CASC19-231ENST00000641425 SSUH2Q9Y2M2 353 aa11.21□□□□□ -0.61
CASC19-231ENST00000641425 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
CASC19-231ENST00000641425 HAX1O00165 279 aa11.1□□□□□ -0.63
CASC19-231ENST00000641425 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASC19-231ENST00000641425 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASC19-231ENST00000641425 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
CASC19-231ENST00000641425 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
CASC19-231ENST00000641425 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
CASC19-231ENST00000641425 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
CASC19-231ENST00000641425 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
CASC19-231ENST00000641425 EVX2Q03828 476 aa10.92□□□□□ -0.66
CASC19-231ENST00000641425 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
CASC19-231ENST00000641425 CHADLQ6NUI6 762 aa10.87□□□□□ -0.67
CASC19-231ENST00000641425 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
CASC19-231ENST00000641425 PROM2Q8N271 834 aa10.74□□□□□ -0.69
CASC19-231ENST00000641425 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
CASC19-231ENST00000641425 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
CASC19-231ENST00000641425 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
CASC19-231ENST00000641425 GABBR2O75899 941 aa10.66□□□□□ -0.7
CASC19-231ENST00000641425 FKBP8Q14318 412 aa10.64□□□□□ -0.71
CASC19-231ENST00000641425 LHX8Q68G74 356 aa10.62□□□□□ -0.71
CASC19-231ENST00000641425 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
CASC19-231ENST00000641425 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
CASC19-231ENST00000641425 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
CASC19-231ENST00000641425 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
CASC19-231ENST00000641425 MIER1Q8N108 512 aa10.47□□□□□ -0.73
CASC19-231ENST00000641425 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
CASC19-231ENST00000641425 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
CASC19-231ENST00000641425 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
CASC19-231ENST00000641425 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
CASC19-231ENST00000641425 CLCN6P51797 869 aa10.39□□□□□ -0.75
CASC19-231ENST00000641425 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
CASC19-231ENST00000641425 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
CASC19-231ENST00000641425 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
CASC19-231ENST00000641425 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
CASC19-231ENST00000641425 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
CASC19-231ENST00000641425 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms