RNA–Protein interactions for RNA: ENST00000641425.1

CASC19-231, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,156 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-231ENST00000641425 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CASC19-231ENST00000641425 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
CASC19-231ENST00000641425 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
CASC19-231ENST00000641425 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
CASC19-231ENST00000641425 FOXD1Q16676 465 aa16.36■□□□□ 0.21
CASC19-231ENST00000641425 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
CASC19-231ENST00000641425 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
CASC19-231ENST00000641425 MSH5O43196 834 aa15.48■□□□□ 0.07
CASC19-231ENST00000641425 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
CASC19-231ENST00000641425 ADRA2BP18089 450 aa15.42■□□□□ 0.06
CASC19-231ENST00000641425 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
CASC19-231ENST00000641425 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
CASC19-231ENST00000641425 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
CASC19-231ENST00000641425 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
CASC19-231ENST00000641425 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
CASC19-231ENST00000641425 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
CASC19-231ENST00000641425 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
CASC19-231ENST00000641425 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
CASC19-231ENST00000641425 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
CASC19-231ENST00000641425 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
CASC19-231ENST00000641425 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
CASC19-231ENST00000641425 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
CASC19-231ENST00000641425 KCNA4P22459 653 aa13.2□□□□□ -0.3
CASC19-231ENST00000641425 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
CASC19-231ENST00000641425 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
CASC19-231ENST00000641425 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
CASC19-231ENST00000641425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
CASC19-231ENST00000641425 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
CASC19-231ENST00000641425 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
CASC19-231ENST00000641425 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
CASC19-231ENST00000641425 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
CASC19-231ENST00000641425 CAPN15O75808 1086 aa12.36□□□□□ -0.43
CASC19-231ENST00000641425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
CASC19-231ENST00000641425 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
CASC19-231ENST00000641425 POTEHQ6S545 545 aa12.28□□□□□ -0.44
CASC19-231ENST00000641425 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
CASC19-231ENST00000641425 DSG3P32926 999 aa12.25□□□□□ -0.45
CASC19-231ENST00000641425 APLP2Q06481 763 aa12.25□□□□□ -0.45
CASC19-231ENST00000641425 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
CASC19-231ENST00000641425 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
CASC19-231ENST00000641425 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
CASC19-231ENST00000641425 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
CASC19-231ENST00000641425 ZBTB22O15209 634 aa12.14□□□□□ -0.47
CASC19-231ENST00000641425 ABCB7O75027 752 aa12.1□□□□□ -0.47
CASC19-231ENST00000641425 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
CASC19-231ENST00000641425 POLA2Q14181 598 aa11.93□□□□□ -0.5
CASC19-231ENST00000641425 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
CASC19-231ENST00000641425 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
CASC19-231ENST00000641425 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
CASC19-231ENST00000641425 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
CASC19-231ENST00000641425 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.54
CASC19-231ENST00000641425 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
CASC19-231ENST00000641425 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
CASC19-231ENST00000641425 FBLN2P98095 1184 aa11.47□□□□□ -0.57
CASC19-231ENST00000641425 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
CASC19-231ENST00000641425 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
CASC19-231ENST00000641425 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
CASC19-231ENST00000641425 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
CASC19-231ENST00000641425 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
CASC19-231ENST00000641425 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
CASC19-231ENST00000641425 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
CASC19-231ENST00000641425 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
CASC19-231ENST00000641425 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
CASC19-231ENST00000641425 SSUH2Q9Y2M2 353 aa11.21□□□□□ -0.61
CASC19-231ENST00000641425 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
CASC19-231ENST00000641425 HAX1O00165 279 aa11.1□□□□□ -0.63
CASC19-231ENST00000641425 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASC19-231ENST00000641425 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASC19-231ENST00000641425 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
CASC19-231ENST00000641425 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
CASC19-231ENST00000641425 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
CASC19-231ENST00000641425 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
CASC19-231ENST00000641425 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
CASC19-231ENST00000641425 EVX2Q03828 476 aa10.92□□□□□ -0.66
CASC19-231ENST00000641425 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
CASC19-231ENST00000641425 CHADLQ6NUI6 762 aa10.87□□□□□ -0.67
CASC19-231ENST00000641425 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
CASC19-231ENST00000641425 PROM2Q8N271 834 aa10.74□□□□□ -0.69
CASC19-231ENST00000641425 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
CASC19-231ENST00000641425 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
CASC19-231ENST00000641425 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
CASC19-231ENST00000641425 GABBR2O75899 941 aa10.66□□□□□ -0.7
CASC19-231ENST00000641425 FKBP8Q14318 412 aa10.64□□□□□ -0.71
CASC19-231ENST00000641425 LHX8Q68G74 356 aa10.62□□□□□ -0.71
CASC19-231ENST00000641425 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
CASC19-231ENST00000641425 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
CASC19-231ENST00000641425 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
CASC19-231ENST00000641425 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
CASC19-231ENST00000641425 MIER1Q8N108 512 aa10.47□□□□□ -0.73
CASC19-231ENST00000641425 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
CASC19-231ENST00000641425 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
CASC19-231ENST00000641425 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
CASC19-231ENST00000641425 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
CASC19-231ENST00000641425 CLCN6P51797 869 aa10.39□□□□□ -0.75
CASC19-231ENST00000641425 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
CASC19-231ENST00000641425 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
CASC19-231ENST00000641425 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
CASC19-231ENST00000641425 FBXO3Q9UK99 471 aa10.33□□□□□ -0.76
CASC19-231ENST00000641425 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
CASC19-231ENST00000641425 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms