RNA–Protein interactions for RNA: ENST00000641488.1

CASC19-234, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,157 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-234ENST00000641488 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
CASC19-234ENST00000641488 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
CASC19-234ENST00000641488 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
CASC19-234ENST00000641488 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
CASC19-234ENST00000641488 FOXD1Q16676 465 aa16.7■□□□□ 0.26
CASC19-234ENST00000641488 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
CASC19-234ENST00000641488 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
CASC19-234ENST00000641488 MSH5O43196 834 aa15.9■□□□□ 0.14
CASC19-234ENST00000641488 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
CASC19-234ENST00000641488 ABCC9O60706 1549 aa15.1■□□□□ 0.01
CASC19-234ENST00000641488 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
CASC19-234ENST00000641488 ADRA2BP18089 450 aa14.99□□□□□ -0.01
CASC19-234ENST00000641488 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
CASC19-234ENST00000641488 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
CASC19-234ENST00000641488 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
CASC19-234ENST00000641488 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
CASC19-234ENST00000641488 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
CASC19-234ENST00000641488 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
CASC19-234ENST00000641488 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
CASC19-234ENST00000641488 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
CASC19-234ENST00000641488 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
CASC19-234ENST00000641488 NACADO15069 1562 aa13.75□□□□□ -0.21
CASC19-234ENST00000641488 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
CASC19-234ENST00000641488 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
CASC19-234ENST00000641488 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
CASC19-234ENST00000641488 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
CASC19-234ENST00000641488 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
CASC19-234ENST00000641488 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
CASC19-234ENST00000641488 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
CASC19-234ENST00000641488 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
CASC19-234ENST00000641488 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
CASC19-234ENST00000641488 MYO15BQ96JP2 1530 aa13.31□□□□□ -0.28
CASC19-234ENST00000641488 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
CASC19-234ENST00000641488 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
CASC19-234ENST00000641488 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
CASC19-234ENST00000641488 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
CASC19-234ENST00000641488 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
CASC19-234ENST00000641488 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
CASC19-234ENST00000641488 CUX2O14529 1486 aa13.04□□□□□ -0.32
CASC19-234ENST00000641488 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
CASC19-234ENST00000641488 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
CASC19-234ENST00000641488 PPP4R3CPQ6ZMV5 832 aa12.99□□□□□ -0.33
CASC19-234ENST00000641488 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
CASC19-234ENST00000641488 POTEHQ6S545 545 aa12.93□□□□□ -0.34
CASC19-234ENST00000641488 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
CASC19-234ENST00000641488 NESP48681 1621 aa12.86□□□□□ -0.35
CASC19-234ENST00000641488 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
CASC19-234ENST00000641488 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
CASC19-234ENST00000641488 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
CASC19-234ENST00000641488 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASC19-234ENST00000641488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
CASC19-234ENST00000641488 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
CASC19-234ENST00000641488 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
CASC19-234ENST00000641488 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
CASC19-234ENST00000641488 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CASC19-234ENST00000641488 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
CASC19-234ENST00000641488 LAMC3Q9Y6N6 1575 aa12.49□□□□□ -0.41
CASC19-234ENST00000641488 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
CASC19-234ENST00000641488 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
CASC19-234ENST00000641488 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
CASC19-234ENST00000641488 DSG3P32926 999 aa12.41□□□□□ -0.42
CASC19-234ENST00000641488 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
CASC19-234ENST00000641488 WDR62O43379 1518 aa12.37□□□□□ -0.43
CASC19-234ENST00000641488 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
CASC19-234ENST00000641488 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
CASC19-234ENST00000641488 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
CASC19-234ENST00000641488 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
CASC19-234ENST00000641488 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
CASC19-234ENST00000641488 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
CASC19-234ENST00000641488 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
CASC19-234ENST00000641488 CAPN15O75808 1086 aa12.31□□□□□ -0.44
CASC19-234ENST00000641488 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
CASC19-234ENST00000641488 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
CASC19-234ENST00000641488 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
CASC19-234ENST00000641488 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
CASC19-234ENST00000641488 FANCD2Q9BXW9 1451 aa12.25□□□□□ -0.45
CASC19-234ENST00000641488 ARHGEF11O15085 1522 aa12.25□□□□□ -0.45
CASC19-234ENST00000641488 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
CASC19-234ENST00000641488 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
CASC19-234ENST00000641488 WIZO95785 1651 aa12.19□□□□□ -0.46
CASC19-234ENST00000641488 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
CASC19-234ENST00000641488 CFTRP13569 1480 aa12.11□□□□□ -0.47
CASC19-234ENST00000641488 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
CASC19-234ENST00000641488 FBLN2P98095 1184 aa12.1□□□□□ -0.47
CASC19-234ENST00000641488 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.48
CASC19-234ENST00000641488 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
CASC19-234ENST00000641488 CHD1O14646 1710 aa12.02□□□□□ -0.49
CASC19-234ENST00000641488 EIF4G3O43432 1585 aaKnown RBP11.98□□□□□ -0.49
CASC19-234ENST00000641488 ABCB7O75027 752 aa11.98□□□□□ -0.49
CASC19-234ENST00000641488 TOPBP1Q92547 1522 aa11.96□□□□□ -0.5
CASC19-234ENST00000641488 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
CASC19-234ENST00000641488 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
CASC19-234ENST00000641488 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
CASC19-234ENST00000641488 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
CASC19-234ENST00000641488 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
CASC19-234ENST00000641488 RAD54L2Q9Y4B4 1467 aa11.88□□□□□ -0.51
CASC19-234ENST00000641488 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
CASC19-234ENST00000641488 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
CASC19-234ENST00000641488 APLP2Q06481 763 aa11.86□□□□□ -0.51
CASC19-234ENST00000641488 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms