RNA–Protein interactions for RNA: ENST00000641488.1

CASC19-234, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,157 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-234ENST00000641488 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
CASC19-234ENST00000641488 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
CASC19-234ENST00000641488 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
CASC19-234ENST00000641488 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
CASC19-234ENST00000641488 FOXD1Q16676 465 aa16.7■□□□□ 0.26
CASC19-234ENST00000641488 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
CASC19-234ENST00000641488 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
CASC19-234ENST00000641488 MSH5O43196 834 aa15.9■□□□□ 0.14
CASC19-234ENST00000641488 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
CASC19-234ENST00000641488 ABCC9O60706 1549 aa15.1■□□□□ 0.01
CASC19-234ENST00000641488 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
CASC19-234ENST00000641488 ADRA2BP18089 450 aa14.99□□□□□ -0.01
CASC19-234ENST00000641488 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
CASC19-234ENST00000641488 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
CASC19-234ENST00000641488 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
CASC19-234ENST00000641488 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
CASC19-234ENST00000641488 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
CASC19-234ENST00000641488 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
CASC19-234ENST00000641488 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
CASC19-234ENST00000641488 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
CASC19-234ENST00000641488 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
CASC19-234ENST00000641488 NACADO15069 1562 aa13.75□□□□□ -0.21
CASC19-234ENST00000641488 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
CASC19-234ENST00000641488 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
CASC19-234ENST00000641488 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
CASC19-234ENST00000641488 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
CASC19-234ENST00000641488 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
CASC19-234ENST00000641488 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
CASC19-234ENST00000641488 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
CASC19-234ENST00000641488 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
CASC19-234ENST00000641488 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
CASC19-234ENST00000641488 MYO15BQ96JP2 1530 aa13.31□□□□□ -0.28
CASC19-234ENST00000641488 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
CASC19-234ENST00000641488 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
CASC19-234ENST00000641488 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
CASC19-234ENST00000641488 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
CASC19-234ENST00000641488 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
CASC19-234ENST00000641488 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
CASC19-234ENST00000641488 CUX2O14529 1486 aa13.04□□□□□ -0.32
CASC19-234ENST00000641488 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
CASC19-234ENST00000641488 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
CASC19-234ENST00000641488 PPP4R3CPQ6ZMV5 832 aa12.99□□□□□ -0.33
CASC19-234ENST00000641488 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
CASC19-234ENST00000641488 POTEHQ6S545 545 aa12.93□□□□□ -0.34
CASC19-234ENST00000641488 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
CASC19-234ENST00000641488 NESP48681 1621 aa12.86□□□□□ -0.35
CASC19-234ENST00000641488 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
CASC19-234ENST00000641488 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
CASC19-234ENST00000641488 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
CASC19-234ENST00000641488 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASC19-234ENST00000641488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
CASC19-234ENST00000641488 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
CASC19-234ENST00000641488 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
CASC19-234ENST00000641488 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
CASC19-234ENST00000641488 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CASC19-234ENST00000641488 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
CASC19-234ENST00000641488 LAMC3Q9Y6N6 1575 aa12.49□□□□□ -0.41
CASC19-234ENST00000641488 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
CASC19-234ENST00000641488 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
CASC19-234ENST00000641488 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
CASC19-234ENST00000641488 DSG3P32926 999 aa12.41□□□□□ -0.42
CASC19-234ENST00000641488 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
CASC19-234ENST00000641488 WDR62O43379 1518 aa12.37□□□□□ -0.43
CASC19-234ENST00000641488 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
CASC19-234ENST00000641488 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
CASC19-234ENST00000641488 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
CASC19-234ENST00000641488 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
CASC19-234ENST00000641488 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
CASC19-234ENST00000641488 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
CASC19-234ENST00000641488 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
CASC19-234ENST00000641488 CAPN15O75808 1086 aa12.31□□□□□ -0.44
CASC19-234ENST00000641488 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
CASC19-234ENST00000641488 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
CASC19-234ENST00000641488 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
CASC19-234ENST00000641488 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
CASC19-234ENST00000641488 FANCD2Q9BXW9 1451 aa12.25□□□□□ -0.45
CASC19-234ENST00000641488 ARHGEF11O15085 1522 aa12.25□□□□□ -0.45
CASC19-234ENST00000641488 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
CASC19-234ENST00000641488 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
CASC19-234ENST00000641488 WIZO95785 1651 aa12.19□□□□□ -0.46
CASC19-234ENST00000641488 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
CASC19-234ENST00000641488 CFTRP13569 1480 aa12.11□□□□□ -0.47
CASC19-234ENST00000641488 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
CASC19-234ENST00000641488 FBLN2P98095 1184 aa12.1□□□□□ -0.47
CASC19-234ENST00000641488 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.48
CASC19-234ENST00000641488 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
CASC19-234ENST00000641488 CHD1O14646 1710 aa12.02□□□□□ -0.49
CASC19-234ENST00000641488 EIF4G3O43432 1585 aaKnown RBP11.98□□□□□ -0.49
CASC19-234ENST00000641488 ABCB7O75027 752 aa11.98□□□□□ -0.49
CASC19-234ENST00000641488 TOPBP1Q92547 1522 aa11.96□□□□□ -0.5
CASC19-234ENST00000641488 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
CASC19-234ENST00000641488 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
CASC19-234ENST00000641488 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
CASC19-234ENST00000641488 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
CASC19-234ENST00000641488 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
CASC19-234ENST00000641488 RAD54L2Q9Y4B4 1467 aa11.88□□□□□ -0.51
CASC19-234ENST00000641488 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
CASC19-234ENST00000641488 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
CASC19-234ENST00000641488 APLP2Q06481 763 aa11.86□□□□□ -0.51
CASC19-234ENST00000641488 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms