RNA–Protein interactions for RNA: ENST00000641944.1

CASC19-267, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,117 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-267ENST00000641944 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
CASC19-267ENST00000641944 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
CASC19-267ENST00000641944 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
CASC19-267ENST00000641944 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
CASC19-267ENST00000641944 FOXD1Q16676 465 aa17.98■□□□□ 0.47
CASC19-267ENST00000641944 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
CASC19-267ENST00000641944 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
CASC19-267ENST00000641944 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
CASC19-267ENST00000641944 ADRA2BP18089 450 aa16.98■□□□□ 0.31
CASC19-267ENST00000641944 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
CASC19-267ENST00000641944 MSH5O43196 834 aa16.86■□□□□ 0.29
CASC19-267ENST00000641944 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
CASC19-267ENST00000641944 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
CASC19-267ENST00000641944 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
CASC19-267ENST00000641944 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
CASC19-267ENST00000641944 KCNA4P22459 653 aa15.26■□□□□ 0.03
CASC19-267ENST00000641944 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
CASC19-267ENST00000641944 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
CASC19-267ENST00000641944 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
CASC19-267ENST00000641944 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
CASC19-267ENST00000641944 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
CASC19-267ENST00000641944 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
CASC19-267ENST00000641944 DCAF8L1A6NGE4 600 aa14.74□□□□□ -0.05
CASC19-267ENST00000641944 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
CASC19-267ENST00000641944 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
CASC19-267ENST00000641944 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
CASC19-267ENST00000641944 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
CASC19-267ENST00000641944 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
CASC19-267ENST00000641944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.14
CASC19-267ENST00000641944 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
CASC19-267ENST00000641944 ZBTB22O15209 634 aa14.04□□□□□ -0.16
CASC19-267ENST00000641944 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
CASC19-267ENST00000641944 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
CASC19-267ENST00000641944 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
CASC19-267ENST00000641944 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
CASC19-267ENST00000641944 POTEHQ6S545 545 aa13.65□□□□□ -0.22
CASC19-267ENST00000641944 CAPN15O75808 1086 aa13.63□□□□□ -0.23
CASC19-267ENST00000641944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
CASC19-267ENST00000641944 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
CASC19-267ENST00000641944 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
CASC19-267ENST00000641944 APLP2Q06481 763 aa13.56□□□□□ -0.24
CASC19-267ENST00000641944 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
CASC19-267ENST00000641944 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
CASC19-267ENST00000641944 DSG3P32926 999 aa13.47□□□□□ -0.25
CASC19-267ENST00000641944 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
CASC19-267ENST00000641944 ABCB7O75027 752 aa13.37□□□□□ -0.27
CASC19-267ENST00000641944 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
CASC19-267ENST00000641944 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
CASC19-267ENST00000641944 POLA2Q14181 598 aa13.16□□□□□ -0.3
CASC19-267ENST00000641944 FKBP8Q14318 412 aa13.03□□□□□ -0.32
CASC19-267ENST00000641944 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
CASC19-267ENST00000641944 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
CASC19-267ENST00000641944 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
CASC19-267ENST00000641944 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
CASC19-267ENST00000641944 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
CASC19-267ENST00000641944 FBLN2P98095 1184 aa12.72□□□□□ -0.37
CASC19-267ENST00000641944 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
CASC19-267ENST00000641944 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
CASC19-267ENST00000641944 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
CASC19-267ENST00000641944 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
CASC19-267ENST00000641944 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
CASC19-267ENST00000641944 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
CASC19-267ENST00000641944 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
CASC19-267ENST00000641944 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
CASC19-267ENST00000641944 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
CASC19-267ENST00000641944 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
CASC19-267ENST00000641944 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
CASC19-267ENST00000641944 SSUH2Q9Y2M2 353 aa12.42□□□□□ -0.42
CASC19-267ENST00000641944 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
CASC19-267ENST00000641944 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
CASC19-267ENST00000641944 PROM2Q8N271 834 aa12.32□□□□□ -0.44
CASC19-267ENST00000641944 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
CASC19-267ENST00000641944 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
CASC19-267ENST00000641944 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
CASC19-267ENST00000641944 PIP4P2Q8N4L2 257 aa12.23□□□□□ -0.45
CASC19-267ENST00000641944 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
CASC19-267ENST00000641944 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
CASC19-267ENST00000641944 HAX1O00165 279 aa12.13□□□□□ -0.47
CASC19-267ENST00000641944 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
CASC19-267ENST00000641944 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
CASC19-267ENST00000641944 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
CASC19-267ENST00000641944 CHADLQ6NUI6 762 aa12□□□□□ -0.49
CASC19-267ENST00000641944 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
CASC19-267ENST00000641944 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
CASC19-267ENST00000641944 PKD2Q13563 968 aa11.9□□□□□ -0.5
CASC19-267ENST00000641944 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
CASC19-267ENST00000641944 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
CASC19-267ENST00000641944 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
CASC19-267ENST00000641944 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
CASC19-267ENST00000641944 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
CASC19-267ENST00000641944 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
CASC19-267ENST00000641944 EVX2Q03828 476 aa11.8□□□□□ -0.52
CASC19-267ENST00000641944 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
CASC19-267ENST00000641944 MIER1Q8N108 512 aa11.77□□□□□ -0.53
CASC19-267ENST00000641944 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
CASC19-267ENST00000641944 HAP1P54257 671 aaPredicted RBP11.72□□□□□ -0.53
CASC19-267ENST00000641944 LHX8Q68G74 356 aa11.71□□□□□ -0.53
CASC19-267ENST00000641944 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
CASC19-267ENST00000641944 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
CASC19-267ENST00000641944 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms