RNA–Protein interactions for RNA: ENST00000641701.1

CASC19-251, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,204 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-251ENST00000641701 NISCHQ9Y2I1 1504 aa13.38□□□□□ -0.27
CASC19-251ENST00000641701 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
CASC19-251ENST00000641701 CHIC1Q5VXU3 224 aa12.86□□□□□ -0.35
CASC19-251ENST00000641701 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
CASC19-251ENST00000641701 PHF23Q9BUL5 403 aaPredicted RBP11.46□□□□□ -0.57
CASC19-251ENST00000641701 ZCCHC6Q5VYS8 1495 aaKnown RBP11.31□□□□□ -0.6
CASC19-251ENST00000641701 SHROOM4Q9ULL8 1493 aa11.3□□□□□ -0.6
CASC19-251ENST00000641701 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
CASC19-251ENST00000641701 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
CASC19-251ENST00000641701 DCAF1Q9Y4B6 1507 aa11□□□□□ -0.65
CASC19-251ENST00000641701 SENP3Q9H4L4 574 aaPredicted RBP10.82□□□□□ -0.68
CASC19-251ENST00000641701 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.69
CASC19-251ENST00000641701 SCRIBQ14160 1630 aa10.7□□□□□ -0.7
CASC19-251ENST00000641701 ABCC9O60706 1549 aa10.68□□□□□ -0.7
CASC19-251ENST00000641701 NACADO15069 1562 aa10.6□□□□□ -0.71
CASC19-251ENST00000641701 RSF1Q96T23 1441 aaPredicted RBP10.53□□□□□ -0.72
CASC19-251ENST00000641701 PLPPR3Q6T4P5 718 aa10.53□□□□□ -0.72
CASC19-251ENST00000641701 RB1CC1Q8TDY2 1594 aa10.45□□□□□ -0.74
CASC19-251ENST00000641701 CECR2Q9BXF3 1484 aa10.41□□□□□ -0.74
CASC19-251ENST00000641701 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
CASC19-251ENST00000641701 WIZO95785 1651 aa10.34□□□□□ -0.75
CASC19-251ENST00000641701 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
CASC19-251ENST00000641701 BAZ1AQ9NRL2 1556 aaPredicted RBP10.3□□□□□ -0.76
CASC19-251ENST00000641701 TRIM41Q8WV44 630 aa10.3□□□□□ -0.76
CASC19-251ENST00000641701 UNC13AQ9UPW8 1703 aa10.29□□□□□ -0.76
CASC19-251ENST00000641701 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
CASC19-251ENST00000641701 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
CASC19-251ENST00000641701 HRCP23327 699 aa10.22□□□□□ -0.77
CASC19-251ENST00000641701 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
CASC19-251ENST00000641701 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
CASC19-251ENST00000641701 EIF4G1Q04637 1599 aaKnown RBP10.19□□□□□ -0.78
CASC19-251ENST00000641701 FOXD1Q16676 465 aa10.14□□□□□ -0.79
CASC19-251ENST00000641701 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
CASC19-251ENST00000641701 SMARCA2P51531 1590 aa10.13□□□□□ -0.79
CASC19-251ENST00000641701 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
CASC19-251ENST00000641701 TRIM26Q12899 539 aaPredicted RBP10.11□□□□□ -0.79
CASC19-251ENST00000641701 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
CASC19-251ENST00000641701 EHMT2Q96KQ7 1210 aa10.09□□□□□ -0.79
CASC19-251ENST00000641701 ABCC8Q09428 1581 aa10.07□□□□□ -0.8
CASC19-251ENST00000641701 PPP6R1Q9UPN7 881 aa10.06□□□□□ -0.8
CASC19-251ENST00000641701 ADRA2BP18089 450 aa10.06□□□□□ -0.8
CASC19-251ENST00000641701 PEG3Q9GZU2 1588 aa10.03□□□□□ -0.8
CASC19-251ENST00000641701 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
CASC19-251ENST00000641701 ATAD2BQ9ULI0 1458 aa9.96□□□□□ -0.82
CASC19-251ENST00000641701 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
CASC19-251ENST00000641701 SOGA1O94964 1423 aa9.94□□□□□ -0.82
CASC19-251ENST00000641701 EEA1Q15075 1411 aa9.92□□□□□ -0.82
CASC19-251ENST00000641701 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
CASC19-251ENST00000641701 RUSC2Q8N2Y8 1516 aa9.88□□□□□ -0.83
CASC19-251ENST00000641701 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
CASC19-251ENST00000641701 CEP162Q5TB80 1403 aa9.87□□□□□ -0.83
CASC19-251ENST00000641701 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
CASC19-251ENST00000641701 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
CASC19-251ENST00000641701 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
CASC19-251ENST00000641701 GOLGA3Q08378 1498 aa9.84□□□□□ -0.83
CASC19-251ENST00000641701 UBTFP17480 764 aaKnown RBP9.82□□□□□ -0.84
CASC19-251ENST00000641701 HMGXB3Q12766 1538 aa9.8□□□□□ -0.84
CASC19-251ENST00000641701 KIF21BO75037 1637 aa9.8□□□□□ -0.84
CASC19-251ENST00000641701 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
CASC19-251ENST00000641701 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
CASC19-251ENST00000641701 TOP2BQ02880 1626 aa9.77□□□□□ -0.84
CASC19-251ENST00000641701 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
CASC19-251ENST00000641701 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
CASC19-251ENST00000641701 RAPGEF2Q9Y4G8 1499 aa9.71□□□□□ -0.85
CASC19-251ENST00000641701 CLIP1P30622 1438 aa9.71□□□□□ -0.85
CASC19-251ENST00000641701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
CASC19-251ENST00000641701 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
CASC19-251ENST00000641701 CUX1P39880 1505 aa9.68□□□□□ -0.86
CASC19-251ENST00000641701 CFTRP13569 1480 aa9.68□□□□□ -0.86
CASC19-251ENST00000641701 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
CASC19-251ENST00000641701 PRDM2Q13029 1718 aa9.66□□□□□ -0.86
CASC19-251ENST00000641701 ERICH3Q5RHP9 1530 aa9.65□□□□□ -0.86
CASC19-251ENST00000641701 PRXQ9BXM0 1461 aa9.63□□□□□ -0.87
CASC19-251ENST00000641701 RANGAP1P46060 587 aaPredicted RBP9.63□□□□□ -0.87
CASC19-251ENST00000641701 KIF27Q86VH2 1401 aa9.62□□□□□ -0.87
CASC19-251ENST00000641701 PIAS4Q8N2W9 510 aaPredicted RBP9.6□□□□□ -0.87
CASC19-251ENST00000641701 APLP2Q06481 763 aa9.6□□□□□ -0.87
CASC19-251ENST00000641701 CC2D2AQ9P2K1 1620 aa9.59□□□□□ -0.87
CASC19-251ENST00000641701 CADPSQ9ULU8 1353 aa9.58□□□□□ -0.88
CASC19-251ENST00000641701 ARAP1Q96P48 1450 aa9.57□□□□□ -0.88
CASC19-251ENST00000641701 KCNA4P22459 653 aa9.56□□□□□ -0.88
CASC19-251ENST00000641701 HNRNPUL2Q1KMD3 747 aaKnown RBP9.54□□□□□ -0.88
CASC19-251ENST00000641701 CUX2O14529 1486 aa9.54□□□□□ -0.88
CASC19-251ENST00000641701 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
CASC19-251ENST00000641701 FANCD2Q9BXW9 1451 aa9.5□□□□□ -0.89
CASC19-251ENST00000641701 ARHGAP35Q9NRY4 1499 aa9.49□□□□□ -0.89
CASC19-251ENST00000641701 IGF1RP08069 1367 aa9.48□□□□□ -0.89
CASC19-251ENST00000641701 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
CASC19-251ENST00000641701 DNMBPQ6XZF7 1577 aa9.46□□□□□ -0.89
CASC19-251ENST00000641701 CARMIL1Q5VZK9 1371 aa9.46□□□□□ -0.9
CASC19-251ENST00000641701 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.9
CASC19-251ENST00000641701 DIEXFQ68CQ4 756 aaKnown RBP9.44□□□□□ -0.9
CASC19-251ENST00000641701 NESP48681 1621 aa9.44□□□□□ -0.9
CASC19-251ENST00000641701 TOPBP1Q92547 1522 aa9.43□□□□□ -0.9
CASC19-251ENST00000641701 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
CASC19-251ENST00000641701 RRBP1Q9P2E9 1410 aaKnown RBP9.42□□□□□ -0.9
CASC19-251ENST00000641701 RAD54L2Q9Y4B4 1467 aa9.42□□□□□ -0.9
CASC19-251ENST00000641701 ABCA10Q8WWZ4 1543 aa9.41□□□□□ -0.9
CASC19-251ENST00000641701 ZNF316A6NFI3 1004 aaPredicted RBP9.41□□□□□ -0.9
CASC19-251ENST00000641701 LAMC3Q9Y6N6 1575 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms