RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 958 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-256ENST00000641746 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
CASC19-256ENST00000641746 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
CASC19-256ENST00000641746 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
CASC19-256ENST00000641746 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
CASC19-256ENST00000641746 FOXD1Q16676 465 aa23.55■■□□□ 1.36
CASC19-256ENST00000641746 MSH5O43196 834 aa22.1■■□□□ 1.13
CASC19-256ENST00000641746 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
CASC19-256ENST00000641746 POTEDQ86YR6 584 aa22.03■■□□□ 1.12
CASC19-256ENST00000641746 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
CASC19-256ENST00000641746 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
CASC19-256ENST00000641746 ADRA2BP18089 450 aa21.74■■□□□ 1.07
CASC19-256ENST00000641746 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
CASC19-256ENST00000641746 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
CASC19-256ENST00000641746 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
CASC19-256ENST00000641746 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
CASC19-256ENST00000641746 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
CASC19-256ENST00000641746 CACNB1Q02641 598 aaPredicted RBP19.12■□□□□ 0.65
CASC19-256ENST00000641746 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
CASC19-256ENST00000641746 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
CASC19-256ENST00000641746 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
CASC19-256ENST00000641746 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
CASC19-256ENST00000641746 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
CASC19-256ENST00000641746 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
CASC19-256ENST00000641746 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
CASC19-256ENST00000641746 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
CASC19-256ENST00000641746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
CASC19-256ENST00000641746 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
CASC19-256ENST00000641746 KCNA4P22459 653 aa17.66■□□□□ 0.42
CASC19-256ENST00000641746 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
CASC19-256ENST00000641746 CAPN15O75808 1086 aa17.58■□□□□ 0.4
CASC19-256ENST00000641746 DSG3P32926 999 aa17.58■□□□□ 0.4
CASC19-256ENST00000641746 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
CASC19-256ENST00000641746 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
CASC19-256ENST00000641746 APLP2Q06481 763 aa17.23■□□□□ 0.35
CASC19-256ENST00000641746 POTEHQ6S545 545 aa17.21■□□□□ 0.35
CASC19-256ENST00000641746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
CASC19-256ENST00000641746 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
CASC19-256ENST00000641746 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
CASC19-256ENST00000641746 ABCB7O75027 752 aa17.14■□□□□ 0.33
CASC19-256ENST00000641746 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
CASC19-256ENST00000641746 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
CASC19-256ENST00000641746 POLA2Q14181 598 aa16.75■□□□□ 0.27
CASC19-256ENST00000641746 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
CASC19-256ENST00000641746 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
CASC19-256ENST00000641746 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
CASC19-256ENST00000641746 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
CASC19-256ENST00000641746 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
CASC19-256ENST00000641746 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
CASC19-256ENST00000641746 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
CASC19-256ENST00000641746 ZBTB22O15209 634 aa16.24■□□□□ 0.19
CASC19-256ENST00000641746 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
CASC19-256ENST00000641746 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
CASC19-256ENST00000641746 ATXN8OSP0DMR3 200 aa16.08■□□□□ 0.16
CASC19-256ENST00000641746 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
CASC19-256ENST00000641746 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
CASC19-256ENST00000641746 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
CASC19-256ENST00000641746 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
CASC19-256ENST00000641746 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
CASC19-256ENST00000641746 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
CASC19-256ENST00000641746 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
CASC19-256ENST00000641746 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CASC19-256ENST00000641746 HAX1O00165 279 aa15.83■□□□□ 0.12
CASC19-256ENST00000641746 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
CASC19-256ENST00000641746 EVX2Q03828 476 aa15.66■□□□□ 0.1
CASC19-256ENST00000641746 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
CASC19-256ENST00000641746 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
CASC19-256ENST00000641746 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
CASC19-256ENST00000641746 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
CASC19-256ENST00000641746 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
CASC19-256ENST00000641746 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
CASC19-256ENST00000641746 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
CASC19-256ENST00000641746 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
CASC19-256ENST00000641746 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
CASC19-256ENST00000641746 GABBR2O75899 941 aa15.27■□□□□ 0.04
CASC19-256ENST00000641746 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
CASC19-256ENST00000641746 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
CASC19-256ENST00000641746 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
CASC19-256ENST00000641746 LHX8Q68G74 356 aa15.02■□□□□ -0
CASC19-256ENST00000641746 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
CASC19-256ENST00000641746 CLCN6P51797 869 aa14.94□□□□□ -0.02
CASC19-256ENST00000641746 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
CASC19-256ENST00000641746 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
CASC19-256ENST00000641746 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
CASC19-256ENST00000641746 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
CASC19-256ENST00000641746 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.04
CASC19-256ENST00000641746 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
CASC19-256ENST00000641746 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
CASC19-256ENST00000641746 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
CASC19-256ENST00000641746 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
CASC19-256ENST00000641746 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
CASC19-256ENST00000641746 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
CASC19-256ENST00000641746 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
CASC19-256ENST00000641746 PROM2Q8N271 834 aa14.48□□□□□ -0.09
CASC19-256ENST00000641746 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
CASC19-256ENST00000641746 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
CASC19-256ENST00000641746 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
CASC19-256ENST00000641746 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
CASC19-256ENST00000641746 ASTLQ6HA08 431 aaPredicted RBP14.36□□□□□ -0.11
CASC19-256ENST00000641746 ATMINO43313 823 aaPredicted RBP14.33□□□□□ -0.12
CASC19-256ENST00000641746 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms