RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
CASC19-243ENST00000641588 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
CASC19-243ENST00000641588 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
CASC19-243ENST00000641588 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
CASC19-243ENST00000641588 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
CASC19-243ENST00000641588 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
CASC19-243ENST00000641588 FOXD1Q16676 465 aa14.71□□□□□ -0.05
CASC19-243ENST00000641588 ADRA2BP18089 450 aa14.54□□□□□ -0.08
CASC19-243ENST00000641588 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
CASC19-243ENST00000641588 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
CASC19-243ENST00000641588 KCNA4P22459 653 aa13.9□□□□□ -0.18
CASC19-243ENST00000641588 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
CASC19-243ENST00000641588 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
CASC19-243ENST00000641588 MSH5O43196 834 aa13.44□□□□□ -0.26
CASC19-243ENST00000641588 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
CASC19-243ENST00000641588 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
CASC19-243ENST00000641588 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
CASC19-243ENST00000641588 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
CASC19-243ENST00000641588 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
CASC19-243ENST00000641588 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
CASC19-243ENST00000641588 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
CASC19-243ENST00000641588 ZBTB22O15209 634 aa12.83□□□□□ -0.36
CASC19-243ENST00000641588 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
CASC19-243ENST00000641588 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
CASC19-243ENST00000641588 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
CASC19-243ENST00000641588 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
CASC19-243ENST00000641588 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
CASC19-243ENST00000641588 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
CASC19-243ENST00000641588 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
CASC19-243ENST00000641588 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
CASC19-243ENST00000641588 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
CASC19-243ENST00000641588 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
CASC19-243ENST00000641588 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
CASC19-243ENST00000641588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
CASC19-243ENST00000641588 POTEHQ6S545 545 aa12.06□□□□□ -0.48
CASC19-243ENST00000641588 MYT1Q01538 1121 aa12.03□□□□□ -0.48
CASC19-243ENST00000641588 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
CASC19-243ENST00000641588 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
CASC19-243ENST00000641588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
CASC19-243ENST00000641588 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
CASC19-243ENST00000641588 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
CASC19-243ENST00000641588 FKBP8Q14318 412 aa11.8□□□□□ -0.52
CASC19-243ENST00000641588 NISCHQ9Y2I1 1504 aa11.77□□□□□ -0.53
CASC19-243ENST00000641588 HRCP23327 699 aa11.69□□□□□ -0.54
CASC19-243ENST00000641588 APLP2Q06481 763 aa11.65□□□□□ -0.54
CASC19-243ENST00000641588 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
CASC19-243ENST00000641588 RTN4Q9NQC3 1192 aaKnown RBP11.54□□□□□ -0.56
CASC19-243ENST00000641588 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
CASC19-243ENST00000641588 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
CASC19-243ENST00000641588 TTBK1Q5TCY1 1321 aaPredicted RBP11.5□□□□□ -0.57
CASC19-243ENST00000641588 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
CASC19-243ENST00000641588 TRHP20396 242 aaPredicted RBP11.46□□□□□ -0.57
CASC19-243ENST00000641588 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
CASC19-243ENST00000641588 CAPN15O75808 1086 aa11.4□□□□□ -0.59
CASC19-243ENST00000641588 C1QBPQ07021 282 aaKnown RBP11.38□□□□□ -0.59
CASC19-243ENST00000641588 POLA2Q14181 598 aa11.38□□□□□ -0.59
CASC19-243ENST00000641588 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
CASC19-243ENST00000641588 FBLN2P98095 1184 aa11.34□□□□□ -0.59
CASC19-243ENST00000641588 ABCB7O75027 752 aa11.25□□□□□ -0.61
CASC19-243ENST00000641588 PROM2Q8N271 834 aa11.24□□□□□ -0.61
CASC19-243ENST00000641588 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
CASC19-243ENST00000641588 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
CASC19-243ENST00000641588 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
CASC19-243ENST00000641588 DSG3P32926 999 aa11.11□□□□□ -0.63
CASC19-243ENST00000641588 ZEB1P37275 1124 aaPredicted RBP11.1□□□□□ -0.63
CASC19-243ENST00000641588 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
CASC19-243ENST00000641588 PPARGC1BQ86YN6 1023 aaKnown RBP11.04□□□□□ -0.64
CASC19-243ENST00000641588 PCGF6Q9BYE7 350 aa11.02□□□□□ -0.65
CASC19-243ENST00000641588 DCAF1Q9Y4B6 1507 aa10.99□□□□□ -0.65
CASC19-243ENST00000641588 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
CASC19-243ENST00000641588 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
CASC19-243ENST00000641588 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
CASC19-243ENST00000641588 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
CASC19-243ENST00000641588 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
CASC19-243ENST00000641588 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
CASC19-243ENST00000641588 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
CASC19-243ENST00000641588 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
CASC19-243ENST00000641588 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
CASC19-243ENST00000641588 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
CASC19-243ENST00000641588 TRIM26Q12899 539 aaPredicted RBP10.84□□□□□ -0.67
CASC19-243ENST00000641588 STAG3Q9UJ98 1225 aa10.83□□□□□ -0.68
CASC19-243ENST00000641588 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
CASC19-243ENST00000641588 PKD2Q13563 968 aa10.79□□□□□ -0.68
CASC19-243ENST00000641588 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
CASC19-243ENST00000641588 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
CASC19-243ENST00000641588 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
CASC19-243ENST00000641588 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
CASC19-243ENST00000641588 MIER1Q8N108 512 aa10.72□□□□□ -0.69
CASC19-243ENST00000641588 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
CASC19-243ENST00000641588 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
CASC19-243ENST00000641588 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
CASC19-243ENST00000641588 GTF3C3Q9Y5Q9 886 aa10.67□□□□□ -0.7
CASC19-243ENST00000641588 NEUROD1Q13562 356 aa10.66□□□□□ -0.7
CASC19-243ENST00000641588 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
CASC19-243ENST00000641588 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
CASC19-243ENST00000641588 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
CASC19-243ENST00000641588 PLEKHG5O94827 1062 aa10.58□□□□□ -0.72
CASC19-243ENST00000641588 CLSPNQ9HAW4 1339 aa10.57□□□□□ -0.72
CASC19-243ENST00000641588 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
CASC19-243ENST00000641588 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms