RNA–Protein interactions for RNA: ENST00000641414.1

CASC19-228, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,684 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-228ENST00000641414 NISCHQ9Y2I1 1504 aa14.79□□□□□ -0.04
CASC19-228ENST00000641414 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.11
CASC19-228ENST00000641414 CHIC1Q5VXU3 224 aa13.98□□□□□ -0.17
CASC19-228ENST00000641414 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
CASC19-228ENST00000641414 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
CASC19-228ENST00000641414 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
CASC19-228ENST00000641414 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
CASC19-228ENST00000641414 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
CASC19-228ENST00000641414 ABCC9O60706 1549 aa12.21□□□□□ -0.45
CASC19-228ENST00000641414 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
CASC19-228ENST00000641414 SHROOM4Q9ULL8 1493 aa12.13□□□□□ -0.47
CASC19-228ENST00000641414 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
CASC19-228ENST00000641414 NACADO15069 1562 aa12.02□□□□□ -0.49
CASC19-228ENST00000641414 RB1CC1Q8TDY2 1594 aa11.93□□□□□ -0.5
CASC19-228ENST00000641414 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
CASC19-228ENST00000641414 POTEDQ86YR6 584 aa11.8□□□□□ -0.52
CASC19-228ENST00000641414 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.54
CASC19-228ENST00000641414 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
CASC19-228ENST00000641414 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASC19-228ENST00000641414 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
CASC19-228ENST00000641414 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
CASC19-228ENST00000641414 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
CASC19-228ENST00000641414 BAZ1AQ9NRL2 1556 aaPredicted RBP11.44□□□□□ -0.58
CASC19-228ENST00000641414 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
CASC19-228ENST00000641414 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
CASC19-228ENST00000641414 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
CASC19-228ENST00000641414 WIZO95785 1651 aa11.33□□□□□ -0.6
CASC19-228ENST00000641414 FOXD1Q16676 465 aa11.32□□□□□ -0.6
CASC19-228ENST00000641414 TOP2AP11388 1531 aaKnown RBP11.23□□□□□ -0.61
CASC19-228ENST00000641414 PEG3Q9GZU2 1588 aa11.21□□□□□ -0.62
CASC19-228ENST00000641414 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
CASC19-228ENST00000641414 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
CASC19-228ENST00000641414 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
CASC19-228ENST00000641414 BAZ1BQ9UIG0 1483 aaKnown RBP11.15□□□□□ -0.62
CASC19-228ENST00000641414 CCDC88BA6NC98 1476 aa11.11□□□□□ -0.63
CASC19-228ENST00000641414 NCAPD3P42695 1498 aa11.08□□□□□ -0.64
CASC19-228ENST00000641414 HMGXB3Q12766 1538 aa11.07□□□□□ -0.64
CASC19-228ENST00000641414 CC2D2AQ9P2K1 1620 aa11.03□□□□□ -0.64
CASC19-228ENST00000641414 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
CASC19-228ENST00000641414 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
CASC19-228ENST00000641414 CFTRP13569 1480 aa10.84□□□□□ -0.67
CASC19-228ENST00000641414 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
CASC19-228ENST00000641414 ADRA2BP18089 450 aa10.84□□□□□ -0.67
CASC19-228ENST00000641414 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
CASC19-228ENST00000641414 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
CASC19-228ENST00000641414 FAM9AQ8IZU1 332 aaPredicted RBP10.82□□□□□ -0.68
CASC19-228ENST00000641414 PRDM2Q13029 1718 aa10.77□□□□□ -0.68
CASC19-228ENST00000641414 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
CASC19-228ENST00000641414 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
CASC19-228ENST00000641414 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
CASC19-228ENST00000641414 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
CASC19-228ENST00000641414 LAMC3Q9Y6N6 1575 aa10.72□□□□□ -0.69
CASC19-228ENST00000641414 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.7
CASC19-228ENST00000641414 NESP48681 1621 aa10.7□□□□□ -0.7
CASC19-228ENST00000641414 EEA1Q15075 1411 aa10.7□□□□□ -0.7
CASC19-228ENST00000641414 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
CASC19-228ENST00000641414 PIAS4Q8N2W9 510 aaPredicted RBP10.69□□□□□ -0.7
CASC19-228ENST00000641414 SOGA1O94964 1423 aa10.69□□□□□ -0.7
CASC19-228ENST00000641414 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
CASC19-228ENST00000641414 CUX1P39880 1505 aa10.68□□□□□ -0.7
CASC19-228ENST00000641414 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
CASC19-228ENST00000641414 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
CASC19-228ENST00000641414 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.71
CASC19-228ENST00000641414 RUSC2Q8N2Y8 1516 aa10.63□□□□□ -0.71
CASC19-228ENST00000641414 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
CASC19-228ENST00000641414 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
CASC19-228ENST00000641414 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
CASC19-228ENST00000641414 TOPBP1Q92547 1522 aa10.57□□□□□ -0.72
CASC19-228ENST00000641414 KIF21AQ7Z4S6 1674 aa10.57□□□□□ -0.72
CASC19-228ENST00000641414 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
CASC19-228ENST00000641414 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
CASC19-228ENST00000641414 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
CASC19-228ENST00000641414 CUX2O14529 1486 aa10.53□□□□□ -0.72
CASC19-228ENST00000641414 POLA1P09884 1462 aaPredicted RBP10.53□□□□□ -0.72
CASC19-228ENST00000641414 KIF21BO75037 1637 aa10.52□□□□□ -0.72
CASC19-228ENST00000641414 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
CASC19-228ENST00000641414 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
CASC19-228ENST00000641414 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
CASC19-228ENST00000641414 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
CASC19-228ENST00000641414 MSH5O43196 834 aa10.49□□□□□ -0.73
CASC19-228ENST00000641414 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
CASC19-228ENST00000641414 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
CASC19-228ENST00000641414 ERICH3Q5RHP9 1530 aa10.46□□□□□ -0.73
CASC19-228ENST00000641414 PRXQ9BXM0 1461 aa10.46□□□□□ -0.73
CASC19-228ENST00000641414 CEP162Q5TB80 1403 aa10.46□□□□□ -0.73
CASC19-228ENST00000641414 IGF1RP08069 1367 aa10.45□□□□□ -0.74
CASC19-228ENST00000641414 CARMIL1Q5VZK9 1371 aa10.43□□□□□ -0.74
CASC19-228ENST00000641414 WDR62O43379 1518 aa10.42□□□□□ -0.74
CASC19-228ENST00000641414 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
CASC19-228ENST00000641414 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
CASC19-228ENST00000641414 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
CASC19-228ENST00000641414 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.75
CASC19-228ENST00000641414 CLIP1P30622 1438 aa10.39□□□□□ -0.75
CASC19-228ENST00000641414 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
CASC19-228ENST00000641414 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
CASC19-228ENST00000641414 CUL7Q14999 1698 aa10.38□□□□□ -0.75
CASC19-228ENST00000641414 ABCA5Q8WWZ7 1642 aa10.37□□□□□ -0.75
CASC19-228ENST00000641414 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
CASC19-228ENST00000641414 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.763e-6■■■■□ 24.7
CASC19-228ENST00000641414 GRIN2BQ13224 1484 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms