RNA–Protein interactions for RNA: ENST00000642082.1

CASC19-277, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-277ENST00000642082 AEBP2Q6ZN18 517 aaPredicted RBP31.88■■■□□ 2.69
CASC19-277ENST00000642082 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
CASC19-277ENST00000642082 SENP3Q9H4L4 574 aaPredicted RBP27.34■■□□□ 1.97
CASC19-277ENST00000642082 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
CASC19-277ENST00000642082 POTEDQ86YR6 584 aa25.66■■□□□ 1.7
CASC19-277ENST00000642082 FOXD1Q16676 465 aa25.63■■□□□ 1.69
CASC19-277ENST00000642082 MSH5O43196 834 aa24.39■■□□□ 1.49
CASC19-277ENST00000642082 PIAS4Q8N2W9 510 aaPredicted RBP23.67■■□□□ 1.38
CASC19-277ENST00000642082 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.3
CASC19-277ENST00000642082 ADRA2BP18089 450 aa22.99■■□□□ 1.27
CASC19-277ENST00000642082 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
CASC19-277ENST00000642082 CACNB1Q02641 598 aaPredicted RBP21.6■■□□□ 1.05
CASC19-277ENST00000642082 DMRT2Q9Y5R5 561 aa21.52■■□□□ 1.04
CASC19-277ENST00000642082 MAPK8IP2Q13387 824 aaPredicted RBP21.46■■□□□ 1.03
CASC19-277ENST00000642082 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.96
CASC19-277ENST00000642082 RNF39Q9H2S5 420 aa20.72■□□□□ 0.91
CASC19-277ENST00000642082 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
CASC19-277ENST00000642082 C1QBPQ07021 282 aaKnown RBP20.34■□□□□ 0.85
CASC19-277ENST00000642082 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
CASC19-277ENST00000642082 POTEHQ6S545 545 aa19.89■□□□□ 0.77
CASC19-277ENST00000642082 PPP4R3CPQ6ZMV5 832 aa19.89■□□□□ 0.77
CASC19-277ENST00000642082 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
CASC19-277ENST00000642082 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
CASC19-277ENST00000642082 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
CASC19-277ENST00000642082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.68
CASC19-277ENST00000642082 DSG3P32926 999 aa19.04■□□□□ 0.64
CASC19-277ENST00000642082 CAPN15O75808 1086 aa18.88■□□□□ 0.61
CASC19-277ENST00000642082 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
CASC19-277ENST00000642082 U3KPZ7 1027 aaPredicted RBP18.82■□□□□ 0.6
CASC19-277ENST00000642082 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
CASC19-277ENST00000642082 NPM3O75607 178 aaKnown RBP18.53■□□□□ 0.56
CASC19-277ENST00000642082 ABCB7O75027 752 aa18.36■□□□□ 0.53
CASC19-277ENST00000642082 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
CASC19-277ENST00000642082 ZNF219Q9P2Y4 722 aaPredicted RBP18.23■□□□□ 0.51
CASC19-277ENST00000642082 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
CASC19-277ENST00000642082 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
CASC19-277ENST00000642082 APLP2Q06481 763 aa18.15■□□□□ 0.5
CASC19-277ENST00000642082 SP7Q8TDD2 431 aaPredicted RBP18.13■□□□□ 0.49
CASC19-277ENST00000642082 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
CASC19-277ENST00000642082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
CASC19-277ENST00000642082 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
CASC19-277ENST00000642082 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
CASC19-277ENST00000642082 POLA2Q14181 598 aa17.58■□□□□ 0.41
CASC19-277ENST00000642082 PIP4P2Q8N4L2 257 aa17.56■□□□□ 0.4
CASC19-277ENST00000642082 AKT1S1Q96B36 256 aa17.54■□□□□ 0.4
CASC19-277ENST00000642082 HAX1O00165 279 aa17.52■□□□□ 0.4
CASC19-277ENST00000642082 REM2Q8IYK8 340 aaPredicted RBP17.39■□□□□ 0.37
CASC19-277ENST00000642082 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
CASC19-277ENST00000642082 EVX2Q03828 476 aa17.25■□□□□ 0.35
CASC19-277ENST00000642082 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
CASC19-277ENST00000642082 KCNA4P22459 653 aa17.21■□□□□ 0.34
CASC19-277ENST00000642082 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
CASC19-277ENST00000642082 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
CASC19-277ENST00000642082 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
CASC19-277ENST00000642082 LHX8Q68G74 356 aa17■□□□□ 0.31
CASC19-277ENST00000642082 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
CASC19-277ENST00000642082 PLSCR2Q9NRY7 297 aa16.81■□□□□ 0.28
CASC19-277ENST00000642082 GABBR2O75899 941 aa16.8■□□□□ 0.28
CASC19-277ENST00000642082 C19orf67A6NJJ6 358 aa16.78■□□□□ 0.28
CASC19-277ENST00000642082 PRKAR2AP13861 404 aaKnown RBP16.75■□□□□ 0.27
CASC19-277ENST00000642082 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
CASC19-277ENST00000642082 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.24
CASC19-277ENST00000642082 SPDYE6P0CI01 402 aa16.52■□□□□ 0.24
CASC19-277ENST00000642082 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
CASC19-277ENST00000642082 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
CASC19-277ENST00000642082 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
CASC19-277ENST00000642082 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
CASC19-277ENST00000642082 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
CASC19-277ENST00000642082 FBLN2P98095 1184 aa16.25■□□□□ 0.19
CASC19-277ENST00000642082 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
CASC19-277ENST00000642082 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
CASC19-277ENST00000642082 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.18
CASC19-277ENST00000642082 CLCN6P51797 869 aa16.13■□□□□ 0.17
CASC19-277ENST00000642082 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
CASC19-277ENST00000642082 DCBLD2Q96PD2 775 aa16.09■□□□□ 0.17
CASC19-277ENST00000642082 POTEMA6NI47 508 aa16.06■□□□□ 0.16
CASC19-277ENST00000642082 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
CASC19-277ENST00000642082 OTUD5Q96G74 571 aa16.03■□□□□ 0.16
CASC19-277ENST00000642082 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.15
CASC19-277ENST00000642082 ATXN8OSP0DMR3 200 aa15.99■□□□□ 0.15
CASC19-277ENST00000642082 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
CASC19-277ENST00000642082 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
CASC19-277ENST00000642082 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
CASC19-277ENST00000642082 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
CASC19-277ENST00000642082 ZNF579Q8NAF0 562 aaKnown RBP15.86■□□□□ 0.13
CASC19-277ENST00000642082 PCDH10Q9P2E7 1040 aa15.84■□□□□ 0.13
CASC19-277ENST00000642082 ZBTB22O15209 634 aa15.81■□□□□ 0.12
CASC19-277ENST00000642082 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
CASC19-277ENST00000642082 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
CASC19-277ENST00000642082 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
CASC19-277ENST00000642082 LCE2DQ5TA82 110 aaPredicted RBP15.53■□□□□ 0.08
CASC19-277ENST00000642082 POTEJP0CG39 1038 aa15.48■□□□□ 0.07
CASC19-277ENST00000642082 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
CASC19-277ENST00000642082 PHF12Q96QT6 1004 aa15.46■□□□□ 0.07
CASC19-277ENST00000642082 FAM163AQ96GL9 167 aaPredicted RBP15.43■□□□□ 0.06
CASC19-277ENST00000642082 METRNQ9UJH8 293 aa15.43■□□□□ 0.06
CASC19-277ENST00000642082 MAMSTRQ6ZN01 415 aa15.42■□□□□ 0.06
CASC19-277ENST00000642082 PAK3O75914 559 aaPredicted RBP15.38■□□□□ 0.05
CASC19-277ENST00000642082 C7P10643 843 aa15.35■□□□□ 0.05
CASC19-277ENST00000642082 SLC39A7Q92504 469 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms