RNA–Protein interactions for RNA: ENST00000641171.1

CASC19-214, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,493 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-214ENST00000641171 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
CASC19-214ENST00000641171 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
CASC19-214ENST00000641171 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
CASC19-214ENST00000641171 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
CASC19-214ENST00000641171 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
CASC19-214ENST00000641171 FOXD1Q16676 465 aa19.22■□□□□ 0.67
CASC19-214ENST00000641171 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
CASC19-214ENST00000641171 MSH5O43196 834 aa18.33■□□□□ 0.52
CASC19-214ENST00000641171 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
CASC19-214ENST00000641171 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
CASC19-214ENST00000641171 ADRA2BP18089 450 aa17.53■□□□□ 0.4
CASC19-214ENST00000641171 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
CASC19-214ENST00000641171 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
CASC19-214ENST00000641171 ABCC9O60706 1549 aa16.64■□□□□ 0.25
CASC19-214ENST00000641171 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
CASC19-214ENST00000641171 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
CASC19-214ENST00000641171 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
CASC19-214ENST00000641171 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
CASC19-214ENST00000641171 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
CASC19-214ENST00000641171 NACADO15069 1562 aa16.17■□□□□ 0.18
CASC19-214ENST00000641171 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
CASC19-214ENST00000641171 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
CASC19-214ENST00000641171 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
CASC19-214ENST00000641171 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
CASC19-214ENST00000641171 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
CASC19-214ENST00000641171 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
CASC19-214ENST00000641171 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
CASC19-214ENST00000641171 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
CASC19-214ENST00000641171 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
CASC19-214ENST00000641171 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
CASC19-214ENST00000641171 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
CASC19-214ENST00000641171 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
CASC19-214ENST00000641171 KCNA4P22459 653 aa15.44■□□□□ 0.06
CASC19-214ENST00000641171 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
CASC19-214ENST00000641171 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
CASC19-214ENST00000641171 CNKSR2Q8WXI2 1034 aa15.27■□□□□ 0.04
CASC19-214ENST00000641171 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
CASC19-214ENST00000641171 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
CASC19-214ENST00000641171 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
CASC19-214ENST00000641171 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
CASC19-214ENST00000641171 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
CASC19-214ENST00000641171 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
CASC19-214ENST00000641171 SMARCA4P51532 1647 aa15.04■□□□□ -0
CASC19-214ENST00000641171 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
CASC19-214ENST00000641171 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
CASC19-214ENST00000641171 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
CASC19-214ENST00000641171 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
CASC19-214ENST00000641171 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
CASC19-214ENST00000641171 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
CASC19-214ENST00000641171 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
CASC19-214ENST00000641171 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
CASC19-214ENST00000641171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
CASC19-214ENST00000641171 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
CASC19-214ENST00000641171 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
CASC19-214ENST00000641171 WIZO95785 1651 aa14.81□□□□□ -0.04
CASC19-214ENST00000641171 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
CASC19-214ENST00000641171 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
CASC19-214ENST00000641171 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
CASC19-214ENST00000641171 POTEHQ6S545 545 aa14.56□□□□□ -0.08
CASC19-214ENST00000641171 CCDC88BA6NC98 1476 aa14.56□□□□□ -0.08
CASC19-214ENST00000641171 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
CASC19-214ENST00000641171 LAMC3Q9Y6N6 1575 aa14.49□□□□□ -0.09
CASC19-214ENST00000641171 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
CASC19-214ENST00000641171 CFTRP13569 1480 aa14.46□□□□□ -0.09
CASC19-214ENST00000641171 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
CASC19-214ENST00000641171 CAPN15O75808 1086 aa14.44□□□□□ -0.1
CASC19-214ENST00000641171 NESP48681 1621 aa14.43□□□□□ -0.1
CASC19-214ENST00000641171 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
CASC19-214ENST00000641171 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
CASC19-214ENST00000641171 DSG3P32926 999 aa14.33□□□□□ -0.12
CASC19-214ENST00000641171 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
CASC19-214ENST00000641171 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
CASC19-214ENST00000641171 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
CASC19-214ENST00000641171 ZBTB22O15209 634 aa14.25□□□□□ -0.13
CASC19-214ENST00000641171 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
CASC19-214ENST00000641171 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
CASC19-214ENST00000641171 KIF21AQ7Z4S6 1674 aa14.22□□□□□ -0.13
CASC19-214ENST00000641171 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
CASC19-214ENST00000641171 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
CASC19-214ENST00000641171 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
CASC19-214ENST00000641171 CUX2O14529 1486 aa14.14□□□□□ -0.15
CASC19-214ENST00000641171 WDR62O43379 1518 aa14.14□□□□□ -0.15
CASC19-214ENST00000641171 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
CASC19-214ENST00000641171 APLP2Q06481 763 aa14.13□□□□□ -0.15
CASC19-214ENST00000641171 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
CASC19-214ENST00000641171 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
CASC19-214ENST00000641171 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
CASC19-214ENST00000641171 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
CASC19-214ENST00000641171 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
CASC19-214ENST00000641171 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
CASC19-214ENST00000641171 CUX1P39880 1505 aa14.05□□□□□ -0.16
CASC19-214ENST00000641171 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
CASC19-214ENST00000641171 ABCB7O75027 752 aa14□□□□□ -0.17
CASC19-214ENST00000641171 IFT140Q96RY7 1462 aa14□□□□□ -0.17
CASC19-214ENST00000641171 SOGA1O94964 1423 aa14□□□□□ -0.17
CASC19-214ENST00000641171 TOP2BQ02880 1626 aa14□□□□□ -0.17
CASC19-214ENST00000641171 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
CASC19-214ENST00000641171 FGD5Q6ZNL6 1462 aa14□□□□□ -0.17
CASC19-214ENST00000641171 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
CASC19-214ENST00000641171 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms