RNA–Protein interactions for RNA: ENST00000641171.1

CASC19-214, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,493 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-214ENST00000641171 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
CASC19-214ENST00000641171 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
CASC19-214ENST00000641171 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
CASC19-214ENST00000641171 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
CASC19-214ENST00000641171 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
CASC19-214ENST00000641171 FOXD1Q16676 465 aa19.22■□□□□ 0.67
CASC19-214ENST00000641171 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
CASC19-214ENST00000641171 MSH5O43196 834 aa18.33■□□□□ 0.52
CASC19-214ENST00000641171 PIAS4Q8N2W9 510 aaPredicted RBP17.96■□□□□ 0.47
CASC19-214ENST00000641171 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
CASC19-214ENST00000641171 ADRA2BP18089 450 aa17.53■□□□□ 0.4
CASC19-214ENST00000641171 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
CASC19-214ENST00000641171 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
CASC19-214ENST00000641171 ABCC9O60706 1549 aa16.64■□□□□ 0.25
CASC19-214ENST00000641171 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
CASC19-214ENST00000641171 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
CASC19-214ENST00000641171 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
CASC19-214ENST00000641171 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
CASC19-214ENST00000641171 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
CASC19-214ENST00000641171 NACADO15069 1562 aa16.17■□□□□ 0.18
CASC19-214ENST00000641171 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
CASC19-214ENST00000641171 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
CASC19-214ENST00000641171 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
CASC19-214ENST00000641171 CACNB1Q02641 598 aaPredicted RBP16.07■□□□□ 0.16
CASC19-214ENST00000641171 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
CASC19-214ENST00000641171 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
CASC19-214ENST00000641171 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
CASC19-214ENST00000641171 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
CASC19-214ENST00000641171 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
CASC19-214ENST00000641171 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
CASC19-214ENST00000641171 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
CASC19-214ENST00000641171 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
CASC19-214ENST00000641171 KCNA4P22459 653 aa15.44■□□□□ 0.06
CASC19-214ENST00000641171 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
CASC19-214ENST00000641171 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
CASC19-214ENST00000641171 CNKSR2Q8WXI2 1034 aa15.27■□□□□ 0.04
CASC19-214ENST00000641171 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
CASC19-214ENST00000641171 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
CASC19-214ENST00000641171 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
CASC19-214ENST00000641171 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
CASC19-214ENST00000641171 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
CASC19-214ENST00000641171 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
CASC19-214ENST00000641171 SMARCA4P51532 1647 aa15.04■□□□□ -0
CASC19-214ENST00000641171 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
CASC19-214ENST00000641171 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
CASC19-214ENST00000641171 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
CASC19-214ENST00000641171 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
CASC19-214ENST00000641171 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
CASC19-214ENST00000641171 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
CASC19-214ENST00000641171 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
CASC19-214ENST00000641171 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
CASC19-214ENST00000641171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
CASC19-214ENST00000641171 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
CASC19-214ENST00000641171 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
CASC19-214ENST00000641171 WIZO95785 1651 aa14.81□□□□□ -0.04
CASC19-214ENST00000641171 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
CASC19-214ENST00000641171 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
CASC19-214ENST00000641171 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
CASC19-214ENST00000641171 POTEHQ6S545 545 aa14.56□□□□□ -0.08
CASC19-214ENST00000641171 CCDC88BA6NC98 1476 aa14.56□□□□□ -0.08
CASC19-214ENST00000641171 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
CASC19-214ENST00000641171 LAMC3Q9Y6N6 1575 aa14.49□□□□□ -0.09
CASC19-214ENST00000641171 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
CASC19-214ENST00000641171 CFTRP13569 1480 aa14.46□□□□□ -0.09
CASC19-214ENST00000641171 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
CASC19-214ENST00000641171 CAPN15O75808 1086 aa14.44□□□□□ -0.1
CASC19-214ENST00000641171 NESP48681 1621 aa14.43□□□□□ -0.1
CASC19-214ENST00000641171 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
CASC19-214ENST00000641171 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
CASC19-214ENST00000641171 DSG3P32926 999 aa14.33□□□□□ -0.12
CASC19-214ENST00000641171 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
CASC19-214ENST00000641171 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
CASC19-214ENST00000641171 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
CASC19-214ENST00000641171 ZBTB22O15209 634 aa14.25□□□□□ -0.13
CASC19-214ENST00000641171 PRDM2Q13029 1718 aa14.24□□□□□ -0.13
CASC19-214ENST00000641171 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
CASC19-214ENST00000641171 KIF21AQ7Z4S6 1674 aa14.22□□□□□ -0.13
CASC19-214ENST00000641171 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
CASC19-214ENST00000641171 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
CASC19-214ENST00000641171 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
CASC19-214ENST00000641171 CUX2O14529 1486 aa14.14□□□□□ -0.15
CASC19-214ENST00000641171 WDR62O43379 1518 aa14.14□□□□□ -0.15
CASC19-214ENST00000641171 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
CASC19-214ENST00000641171 APLP2Q06481 763 aa14.13□□□□□ -0.15
CASC19-214ENST00000641171 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
CASC19-214ENST00000641171 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
CASC19-214ENST00000641171 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
CASC19-214ENST00000641171 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
CASC19-214ENST00000641171 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
CASC19-214ENST00000641171 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
CASC19-214ENST00000641171 CUX1P39880 1505 aa14.05□□□□□ -0.16
CASC19-214ENST00000641171 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
CASC19-214ENST00000641171 ABCB7O75027 752 aa14□□□□□ -0.17
CASC19-214ENST00000641171 IFT140Q96RY7 1462 aa14□□□□□ -0.17
CASC19-214ENST00000641171 SOGA1O94964 1423 aa14□□□□□ -0.17
CASC19-214ENST00000641171 TOP2BQ02880 1626 aa14□□□□□ -0.17
CASC19-214ENST00000641171 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
CASC19-214ENST00000641171 FGD5Q6ZNL6 1462 aa14□□□□□ -0.17
CASC19-214ENST00000641171 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
CASC19-214ENST00000641171 SYNJ1O43426 1573 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms