RNA–Protein interactions for RNA: ENST00000641964.1

CASC19-269, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,415 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-269ENST00000641964 AEBP2Q6ZN18 517 aaPredicted RBP24.6■■□□□ 1.53
CASC19-269ENST00000641964 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
CASC19-269ENST00000641964 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
CASC19-269ENST00000641964 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
CASC19-269ENST00000641964 FOXD1Q16676 465 aa19.59■□□□□ 0.73
CASC19-269ENST00000641964 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
CASC19-269ENST00000641964 MSH5O43196 834 aa18.34■□□□□ 0.53
CASC19-269ENST00000641964 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
CASC19-269ENST00000641964 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
CASC19-269ENST00000641964 ADRA2BP18089 450 aa18.24■□□□□ 0.51
CASC19-269ENST00000641964 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
CASC19-269ENST00000641964 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
CASC19-269ENST00000641964 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
CASC19-269ENST00000641964 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
CASC19-269ENST00000641964 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
CASC19-269ENST00000641964 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
CASC19-269ENST00000641964 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
CASC19-269ENST00000641964 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
CASC19-269ENST00000641964 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
CASC19-269ENST00000641964 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
CASC19-269ENST00000641964 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
CASC19-269ENST00000641964 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
CASC19-269ENST00000641964 C1QBPQ07021 282 aaKnown RBP15.41■□□□□ 0.06
CASC19-269ENST00000641964 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
CASC19-269ENST00000641964 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
CASC19-269ENST00000641964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.3■□□□□ 0.04
CASC19-269ENST00000641964 KCNA4P22459 653 aa15.07■□□□□ 0
CASC19-269ENST00000641964 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
CASC19-269ENST00000641964 CAPN15O75808 1086 aa14.76□□□□□ -0.05
CASC19-269ENST00000641964 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
CASC19-269ENST00000641964 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
CASC19-269ENST00000641964 DSG3P32926 999 aa14.64□□□□□ -0.07
CASC19-269ENST00000641964 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.08
CASC19-269ENST00000641964 APLP2Q06481 763 aa14.49□□□□□ -0.09
CASC19-269ENST00000641964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
CASC19-269ENST00000641964 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
CASC19-269ENST00000641964 ABCB7O75027 752 aa14.41□□□□□ -0.1
CASC19-269ENST00000641964 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
CASC19-269ENST00000641964 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
CASC19-269ENST00000641964 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
CASC19-269ENST00000641964 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
CASC19-269ENST00000641964 POTEHQ6S545 545 aa14.14□□□□□ -0.15
CASC19-269ENST00000641964 POLA2Q14181 598 aa14.1□□□□□ -0.15
CASC19-269ENST00000641964 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
CASC19-269ENST00000641964 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.18
CASC19-269ENST00000641964 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
CASC19-269ENST00000641964 ZBTB22O15209 634 aa13.82□□□□□ -0.2
CASC19-269ENST00000641964 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
CASC19-269ENST00000641964 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
CASC19-269ENST00000641964 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.22
CASC19-269ENST00000641964 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
CASC19-269ENST00000641964 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
CASC19-269ENST00000641964 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
CASC19-269ENST00000641964 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
CASC19-269ENST00000641964 FBLN2P98095 1184 aa13.41□□□□□ -0.26
CASC19-269ENST00000641964 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
CASC19-269ENST00000641964 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
CASC19-269ENST00000641964 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
CASC19-269ENST00000641964 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
CASC19-269ENST00000641964 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
CASC19-269ENST00000641964 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
CASC19-269ENST00000641964 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
CASC19-269ENST00000641964 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.3
CASC19-269ENST00000641964 HAX1O00165 279 aa13.2□□□□□ -0.3
CASC19-269ENST00000641964 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
CASC19-269ENST00000641964 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
CASC19-269ENST00000641964 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
CASC19-269ENST00000641964 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
CASC19-269ENST00000641964 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
CASC19-269ENST00000641964 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
CASC19-269ENST00000641964 EVX2Q03828 476 aa13□□□□□ -0.33
CASC19-269ENST00000641964 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
CASC19-269ENST00000641964 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
CASC19-269ENST00000641964 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
CASC19-269ENST00000641964 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
CASC19-269ENST00000641964 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
CASC19-269ENST00000641964 GABBR2O75899 941 aa12.69□□□□□ -0.38
CASC19-269ENST00000641964 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
CASC19-269ENST00000641964 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
CASC19-269ENST00000641964 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
CASC19-269ENST00000641964 STAG3Q9UJ98 1225 aa12.59□□□□□ -0.39
CASC19-269ENST00000641964 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
CASC19-269ENST00000641964 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
CASC19-269ENST00000641964 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
CASC19-269ENST00000641964 LHX8Q68G74 356 aa12.42□□□□□ -0.42
CASC19-269ENST00000641964 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
CASC19-269ENST00000641964 CLCN6P51797 869 aa12.41□□□□□ -0.42
CASC19-269ENST00000641964 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
CASC19-269ENST00000641964 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
CASC19-269ENST00000641964 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
CASC19-269ENST00000641964 PAK3O75914 559 aaPredicted RBP12.33□□□□□ -0.44
CASC19-269ENST00000641964 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
CASC19-269ENST00000641964 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
CASC19-269ENST00000641964 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
CASC19-269ENST00000641964 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
CASC19-269ENST00000641964 PROM2Q8N271 834 aa12.23□□□□□ -0.45
CASC19-269ENST00000641964 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
CASC19-269ENST00000641964 MIER1Q8N108 512 aa12.12□□□□□ -0.47
CASC19-269ENST00000641964 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
CASC19-269ENST00000641964 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms