RNA–Protein interactions for RNA: ENST00000641487.1

CASC19-233, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 966 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-233ENST00000641487 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
CASC19-233ENST00000641487 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
CASC19-233ENST00000641487 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
CASC19-233ENST00000641487 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
CASC19-233ENST00000641487 FOXD1Q16676 465 aa15.51■□□□□ 0.07
CASC19-233ENST00000641487 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
CASC19-233ENST00000641487 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
CASC19-233ENST00000641487 ADRA2BP18089 450 aa14.59□□□□□ -0.07
CASC19-233ENST00000641487 PIAS4Q8N2W9 510 aaPredicted RBP14.46□□□□□ -0.09
CASC19-233ENST00000641487 MSH5O43196 834 aa14.42□□□□□ -0.1
CASC19-233ENST00000641487 POTEDQ86YR6 584 aa14□□□□□ -0.17
CASC19-233ENST00000641487 NISCHQ9Y2I1 1504 aa13.71□□□□□ -0.21
CASC19-233ENST00000641487 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
CASC19-233ENST00000641487 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
CASC19-233ENST00000641487 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
CASC19-233ENST00000641487 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
CASC19-233ENST00000641487 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
CASC19-233ENST00000641487 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
CASC19-233ENST00000641487 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
CASC19-233ENST00000641487 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
CASC19-233ENST00000641487 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
CASC19-233ENST00000641487 KCNA4P22459 653 aa12.61□□□□□ -0.39
CASC19-233ENST00000641487 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
CASC19-233ENST00000641487 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
CASC19-233ENST00000641487 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
CASC19-233ENST00000641487 ABCC9O60706 1549 aa12.37□□□□□ -0.43
CASC19-233ENST00000641487 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
CASC19-233ENST00000641487 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
CASC19-233ENST00000641487 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
CASC19-233ENST00000641487 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
CASC19-233ENST00000641487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.47
CASC19-233ENST00000641487 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
CASC19-233ENST00000641487 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
CASC19-233ENST00000641487 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
CASC19-233ENST00000641487 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
CASC19-233ENST00000641487 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CASC19-233ENST00000641487 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
CASC19-233ENST00000641487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
CASC19-233ENST00000641487 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
CASC19-233ENST00000641487 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
CASC19-233ENST00000641487 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
CASC19-233ENST00000641487 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
CASC19-233ENST00000641487 NACADO15069 1562 aa11.7□□□□□ -0.54
CASC19-233ENST00000641487 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
CASC19-233ENST00000641487 APLP2Q06481 763 aa11.68□□□□□ -0.54
CASC19-233ENST00000641487 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
CASC19-233ENST00000641487 ZBTB22O15209 634 aa11.63□□□□□ -0.55
CASC19-233ENST00000641487 DSG3P32926 999 aa11.63□□□□□ -0.55
CASC19-233ENST00000641487 CAPN15O75808 1086 aa11.62□□□□□ -0.55
CASC19-233ENST00000641487 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
CASC19-233ENST00000641487 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
CASC19-233ENST00000641487 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
CASC19-233ENST00000641487 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
CASC19-233ENST00000641487 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASC19-233ENST00000641487 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
CASC19-233ENST00000641487 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
CASC19-233ENST00000641487 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
CASC19-233ENST00000641487 BICRAQ9NZM4 1560 aa11.39□□□□□ -0.59
CASC19-233ENST00000641487 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
CASC19-233ENST00000641487 ABCB7O75027 752 aa11.36□□□□□ -0.59
CASC19-233ENST00000641487 ZCCHC6Q5VYS8 1495 aaKnown RBP11.35□□□□□ -0.59
CASC19-233ENST00000641487 SHROOM4Q9ULL8 1493 aa11.35□□□□□ -0.59
CASC19-233ENST00000641487 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
CASC19-233ENST00000641487 POLA2Q14181 598 aa11.3□□□□□ -0.6
CASC19-233ENST00000641487 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
CASC19-233ENST00000641487 SCRIBQ14160 1630 aa11.17□□□□□ -0.62
CASC19-233ENST00000641487 CC2D2AQ9P2K1 1620 aa11.16□□□□□ -0.62
CASC19-233ENST00000641487 EIF4G1Q04637 1599 aaKnown RBP11.15□□□□□ -0.62
CASC19-233ENST00000641487 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
CASC19-233ENST00000641487 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
CASC19-233ENST00000641487 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
CASC19-233ENST00000641487 FBLN2P98095 1184 aa10.9□□□□□ -0.66
CASC19-233ENST00000641487 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
CASC19-233ENST00000641487 AKT1S1Q96B36 256 aa10.89□□□□□ -0.67
CASC19-233ENST00000641487 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
CASC19-233ENST00000641487 NCAPD3P42695 1498 aa10.83□□□□□ -0.68
CASC19-233ENST00000641487 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
CASC19-233ENST00000641487 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
CASC19-233ENST00000641487 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
CASC19-233ENST00000641487 CUX2O14529 1486 aa10.76□□□□□ -0.69
CASC19-233ENST00000641487 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
CASC19-233ENST00000641487 POTEHQ6S545 545 aa10.75□□□□□ -0.69
CASC19-233ENST00000641487 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
CASC19-233ENST00000641487 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
CASC19-233ENST00000641487 ERCC6Q03468 1493 aa10.73□□□□□ -0.69
CASC19-233ENST00000641487 SMARCA2P51531 1590 aa10.72□□□□□ -0.69
CASC19-233ENST00000641487 HMGXB3Q12766 1538 aa10.7□□□□□ -0.7
CASC19-233ENST00000641487 FKBP8Q14318 412 aa10.7□□□□□ -0.7
CASC19-233ENST00000641487 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
CASC19-233ENST00000641487 BCANQ96GW7 911 aa10.68□□□□□ -0.7
CASC19-233ENST00000641487 SMARCA4P51532 1647 aa10.67□□□□□ -0.7
CASC19-233ENST00000641487 ZNF692Q9BU19 519 aaPredicted RBP10.66□□□□□ -0.7
CASC19-233ENST00000641487 BAZ1AQ9NRL2 1556 aaPredicted RBP10.65□□□□□ -0.7
CASC19-233ENST00000641487 BAZ1BQ9UIG0 1483 aaKnown RBP10.64□□□□□ -0.71
CASC19-233ENST00000641487 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
CASC19-233ENST00000641487 PRKCSHP14314 528 aaPredicted RBP10.63□□□□□ -0.71
CASC19-233ENST00000641487 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
CASC19-233ENST00000641487 PEG3Q9GZU2 1588 aa10.61□□□□□ -0.71
CASC19-233ENST00000641487 NESP48681 1621 aa10.59□□□□□ -0.71
CASC19-233ENST00000641487 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms