RNA–Protein interactions for RNA: ENST00000641487.1

CASC19-233, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 966 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-233ENST00000641487 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
CASC19-233ENST00000641487 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
CASC19-233ENST00000641487 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
CASC19-233ENST00000641487 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
CASC19-233ENST00000641487 FOXD1Q16676 465 aa15.51■□□□□ 0.07
CASC19-233ENST00000641487 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
CASC19-233ENST00000641487 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
CASC19-233ENST00000641487 ADRA2BP18089 450 aa14.59□□□□□ -0.07
CASC19-233ENST00000641487 PIAS4Q8N2W9 510 aaPredicted RBP14.46□□□□□ -0.09
CASC19-233ENST00000641487 MSH5O43196 834 aa14.42□□□□□ -0.1
CASC19-233ENST00000641487 POTEDQ86YR6 584 aa14□□□□□ -0.17
CASC19-233ENST00000641487 NISCHQ9Y2I1 1504 aa13.71□□□□□ -0.21
CASC19-233ENST00000641487 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
CASC19-233ENST00000641487 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
CASC19-233ENST00000641487 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
CASC19-233ENST00000641487 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
CASC19-233ENST00000641487 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
CASC19-233ENST00000641487 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
CASC19-233ENST00000641487 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
CASC19-233ENST00000641487 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
CASC19-233ENST00000641487 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
CASC19-233ENST00000641487 KCNA4P22459 653 aa12.61□□□□□ -0.39
CASC19-233ENST00000641487 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
CASC19-233ENST00000641487 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
CASC19-233ENST00000641487 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
CASC19-233ENST00000641487 ABCC9O60706 1549 aa12.37□□□□□ -0.43
CASC19-233ENST00000641487 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
CASC19-233ENST00000641487 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
CASC19-233ENST00000641487 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
CASC19-233ENST00000641487 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
CASC19-233ENST00000641487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.47
CASC19-233ENST00000641487 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
CASC19-233ENST00000641487 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
CASC19-233ENST00000641487 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
CASC19-233ENST00000641487 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
CASC19-233ENST00000641487 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CASC19-233ENST00000641487 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
CASC19-233ENST00000641487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
CASC19-233ENST00000641487 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
CASC19-233ENST00000641487 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
CASC19-233ENST00000641487 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
CASC19-233ENST00000641487 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
CASC19-233ENST00000641487 NACADO15069 1562 aa11.7□□□□□ -0.54
CASC19-233ENST00000641487 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
CASC19-233ENST00000641487 APLP2Q06481 763 aa11.68□□□□□ -0.54
CASC19-233ENST00000641487 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
CASC19-233ENST00000641487 ZBTB22O15209 634 aa11.63□□□□□ -0.55
CASC19-233ENST00000641487 DSG3P32926 999 aa11.63□□□□□ -0.55
CASC19-233ENST00000641487 CAPN15O75808 1086 aa11.62□□□□□ -0.55
CASC19-233ENST00000641487 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
CASC19-233ENST00000641487 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
CASC19-233ENST00000641487 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
CASC19-233ENST00000641487 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
CASC19-233ENST00000641487 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASC19-233ENST00000641487 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
CASC19-233ENST00000641487 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
CASC19-233ENST00000641487 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
CASC19-233ENST00000641487 BICRAQ9NZM4 1560 aa11.39□□□□□ -0.59
CASC19-233ENST00000641487 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
CASC19-233ENST00000641487 ABCB7O75027 752 aa11.36□□□□□ -0.59
CASC19-233ENST00000641487 ZCCHC6Q5VYS8 1495 aaKnown RBP11.35□□□□□ -0.59
CASC19-233ENST00000641487 SHROOM4Q9ULL8 1493 aa11.35□□□□□ -0.59
CASC19-233ENST00000641487 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
CASC19-233ENST00000641487 POLA2Q14181 598 aa11.3□□□□□ -0.6
CASC19-233ENST00000641487 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
CASC19-233ENST00000641487 SCRIBQ14160 1630 aa11.17□□□□□ -0.62
CASC19-233ENST00000641487 CC2D2AQ9P2K1 1620 aa11.16□□□□□ -0.62
CASC19-233ENST00000641487 EIF4G1Q04637 1599 aaKnown RBP11.15□□□□□ -0.62
CASC19-233ENST00000641487 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
CASC19-233ENST00000641487 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
CASC19-233ENST00000641487 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
CASC19-233ENST00000641487 FBLN2P98095 1184 aa10.9□□□□□ -0.66
CASC19-233ENST00000641487 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
CASC19-233ENST00000641487 AKT1S1Q96B36 256 aa10.89□□□□□ -0.67
CASC19-233ENST00000641487 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
CASC19-233ENST00000641487 NCAPD3P42695 1498 aa10.83□□□□□ -0.68
CASC19-233ENST00000641487 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
CASC19-233ENST00000641487 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
CASC19-233ENST00000641487 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
CASC19-233ENST00000641487 CUX2O14529 1486 aa10.76□□□□□ -0.69
CASC19-233ENST00000641487 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
CASC19-233ENST00000641487 POTEHQ6S545 545 aa10.75□□□□□ -0.69
CASC19-233ENST00000641487 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
CASC19-233ENST00000641487 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
CASC19-233ENST00000641487 ERCC6Q03468 1493 aa10.73□□□□□ -0.69
CASC19-233ENST00000641487 SMARCA2P51531 1590 aa10.72□□□□□ -0.69
CASC19-233ENST00000641487 HMGXB3Q12766 1538 aa10.7□□□□□ -0.7
CASC19-233ENST00000641487 FKBP8Q14318 412 aa10.7□□□□□ -0.7
CASC19-233ENST00000641487 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
CASC19-233ENST00000641487 BCANQ96GW7 911 aa10.68□□□□□ -0.7
CASC19-233ENST00000641487 SMARCA4P51532 1647 aa10.67□□□□□ -0.7
CASC19-233ENST00000641487 ZNF692Q9BU19 519 aaPredicted RBP10.66□□□□□ -0.7
CASC19-233ENST00000641487 BAZ1AQ9NRL2 1556 aaPredicted RBP10.65□□□□□ -0.7
CASC19-233ENST00000641487 BAZ1BQ9UIG0 1483 aaKnown RBP10.64□□□□□ -0.71
CASC19-233ENST00000641487 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
CASC19-233ENST00000641487 PRKCSHP14314 528 aaPredicted RBP10.63□□□□□ -0.71
CASC19-233ENST00000641487 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
CASC19-233ENST00000641487 PEG3Q9GZU2 1588 aa10.61□□□□□ -0.71
CASC19-233ENST00000641487 NESP48681 1621 aa10.59□□□□□ -0.71
CASC19-233ENST00000641487 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms