RNA–Protein interactions for RNA: ENST00000641174.1

CASC19-215, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 959 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-215ENST00000641174 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
CASC19-215ENST00000641174 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
CASC19-215ENST00000641174 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
CASC19-215ENST00000641174 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
CASC19-215ENST00000641174 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
CASC19-215ENST00000641174 FOXD1Q16676 465 aa18.51■□□□□ 0.55
CASC19-215ENST00000641174 MSH5O43196 834 aa17.59■□□□□ 0.41
CASC19-215ENST00000641174 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
CASC19-215ENST00000641174 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
CASC19-215ENST00000641174 ADRA2BP18089 450 aa16.6■□□□□ 0.25
CASC19-215ENST00000641174 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
CASC19-215ENST00000641174 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
CASC19-215ENST00000641174 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
CASC19-215ENST00000641174 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
CASC19-215ENST00000641174 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
CASC19-215ENST00000641174 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
CASC19-215ENST00000641174 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
CASC19-215ENST00000641174 C1QBPQ07021 282 aaKnown RBP14.66□□□□□ -0.06
CASC19-215ENST00000641174 HOXD11P31277 338 aaPredicted RBP14.58□□□□□ -0.08
CASC19-215ENST00000641174 POTEHQ6S545 545 aa14.44□□□□□ -0.1
CASC19-215ENST00000641174 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
CASC19-215ENST00000641174 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
CASC19-215ENST00000641174 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
CASC19-215ENST00000641174 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
CASC19-215ENST00000641174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.96□□□□□ -0.17
CASC19-215ENST00000641174 KCNA4P22459 653 aa13.75□□□□□ -0.21
CASC19-215ENST00000641174 DSG3P32926 999 aa13.73□□□□□ -0.21
CASC19-215ENST00000641174 CAPN15O75808 1086 aa13.66□□□□□ -0.22
CASC19-215ENST00000641174 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
CASC19-215ENST00000641174 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
CASC19-215ENST00000641174 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
CASC19-215ENST00000641174 ABCB7O75027 752 aa13.29□□□□□ -0.28
CASC19-215ENST00000641174 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
CASC19-215ENST00000641174 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
CASC19-215ENST00000641174 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
CASC19-215ENST00000641174 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
CASC19-215ENST00000641174 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
CASC19-215ENST00000641174 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
CASC19-215ENST00000641174 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
CASC19-215ENST00000641174 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
CASC19-215ENST00000641174 APLP2Q06481 763 aa13.01□□□□□ -0.33
CASC19-215ENST00000641174 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
CASC19-215ENST00000641174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
CASC19-215ENST00000641174 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
CASC19-215ENST00000641174 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
CASC19-215ENST00000641174 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
CASC19-215ENST00000641174 HAX1O00165 279 aa12.71□□□□□ -0.37
CASC19-215ENST00000641174 ZBTB22O15209 634 aa12.71□□□□□ -0.37
CASC19-215ENST00000641174 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
CASC19-215ENST00000641174 POLA2Q14181 598 aa12.67□□□□□ -0.38
CASC19-215ENST00000641174 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
CASC19-215ENST00000641174 REM2Q8IYK8 340 aaPredicted RBP12.54□□□□□ -0.4
CASC19-215ENST00000641174 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
CASC19-215ENST00000641174 EVX2Q03828 476 aa12.5□□□□□ -0.41
CASC19-215ENST00000641174 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASC19-215ENST00000641174 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
CASC19-215ENST00000641174 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
CASC19-215ENST00000641174 LHX8Q68G74 356 aa12.31□□□□□ -0.44
CASC19-215ENST00000641174 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
CASC19-215ENST00000641174 MYCNP04198 464 aaPredicted RBP12.29□□□□□ -0.44
CASC19-215ENST00000641174 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
CASC19-215ENST00000641174 GABBR2O75899 941 aa12.14□□□□□ -0.47
CASC19-215ENST00000641174 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
CASC19-215ENST00000641174 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
CASC19-215ENST00000641174 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
CASC19-215ENST00000641174 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
CASC19-215ENST00000641174 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
CASC19-215ENST00000641174 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
CASC19-215ENST00000641174 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
CASC19-215ENST00000641174 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
CASC19-215ENST00000641174 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
CASC19-215ENST00000641174 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
CASC19-215ENST00000641174 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
CASC19-215ENST00000641174 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
CASC19-215ENST00000641174 FBLN2P98095 1184 aa11.67□□□□□ -0.54
CASC19-215ENST00000641174 POTEMA6NI47 508 aa11.66□□□□□ -0.54
CASC19-215ENST00000641174 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
CASC19-215ENST00000641174 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
CASC19-215ENST00000641174 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
CASC19-215ENST00000641174 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
CASC19-215ENST00000641174 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
CASC19-215ENST00000641174 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
CASC19-215ENST00000641174 CLCN6P51797 869 aa11.54□□□□□ -0.56
CASC19-215ENST00000641174 FKBP8Q14318 412 aa11.54□□□□□ -0.56
CASC19-215ENST00000641174 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
CASC19-215ENST00000641174 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
CASC19-215ENST00000641174 POTEB2H3BUK9 544 aa11.49□□□□□ -0.57
CASC19-215ENST00000641174 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
CASC19-215ENST00000641174 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
CASC19-215ENST00000641174 PCDH10Q9P2E7 1040 aa11.41□□□□□ -0.58
CASC19-215ENST00000641174 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
CASC19-215ENST00000641174 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
CASC19-215ENST00000641174 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
CASC19-215ENST00000641174 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
CASC19-215ENST00000641174 PELP1Q8IZL8 1130 aaKnown RBP11.24□□□□□ -0.61
CASC19-215ENST00000641174 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
CASC19-215ENST00000641174 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
CASC19-215ENST00000641174 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
CASC19-215ENST00000641174 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
CASC19-215ENST00000641174 METRNQ9UJH8 293 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms