RNA–Protein interactions for RNA: ENST00000641162.1

CASC19-213, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,091 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-213ENST00000641162 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
CASC19-213ENST00000641162 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
CASC19-213ENST00000641162 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
CASC19-213ENST00000641162 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
CASC19-213ENST00000641162 FOXD1Q16676 465 aa18.9■□□□□ 0.62
CASC19-213ENST00000641162 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
CASC19-213ENST00000641162 MSH5O43196 834 aa17.84■□□□□ 0.45
CASC19-213ENST00000641162 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
CASC19-213ENST00000641162 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
CASC19-213ENST00000641162 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
CASC19-213ENST00000641162 ADRA2BP18089 450 aa17.47■□□□□ 0.39
CASC19-213ENST00000641162 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
CASC19-213ENST00000641162 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
CASC19-213ENST00000641162 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
CASC19-213ENST00000641162 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
CASC19-213ENST00000641162 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
CASC19-213ENST00000641162 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
CASC19-213ENST00000641162 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
CASC19-213ENST00000641162 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
CASC19-213ENST00000641162 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
CASC19-213ENST00000641162 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
CASC19-213ENST00000641162 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
CASC19-213ENST00000641162 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
CASC19-213ENST00000641162 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
CASC19-213ENST00000641162 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
CASC19-213ENST00000641162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
CASC19-213ENST00000641162 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
CASC19-213ENST00000641162 KCNA4P22459 653 aa14.35□□□□□ -0.11
CASC19-213ENST00000641162 CAPN15O75808 1086 aa14.16□□□□□ -0.14
CASC19-213ENST00000641162 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
CASC19-213ENST00000641162 DSG3P32926 999 aa14.15□□□□□ -0.14
CASC19-213ENST00000641162 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
CASC19-213ENST00000641162 APLP2Q06481 763 aa14.07□□□□□ -0.16
CASC19-213ENST00000641162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
CASC19-213ENST00000641162 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
CASC19-213ENST00000641162 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
CASC19-213ENST00000641162 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
CASC19-213ENST00000641162 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
CASC19-213ENST00000641162 ABCB7O75027 752 aa13.77□□□□□ -0.21
CASC19-213ENST00000641162 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
CASC19-213ENST00000641162 POTEHQ6S545 545 aa13.73□□□□□ -0.21
CASC19-213ENST00000641162 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
CASC19-213ENST00000641162 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
CASC19-213ENST00000641162 POLA2Q14181 598 aa13.51□□□□□ -0.25
CASC19-213ENST00000641162 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
CASC19-213ENST00000641162 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
CASC19-213ENST00000641162 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
CASC19-213ENST00000641162 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
CASC19-213ENST00000641162 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
CASC19-213ENST00000641162 ZBTB22O15209 634 aa13.17□□□□□ -0.3
CASC19-213ENST00000641162 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
CASC19-213ENST00000641162 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
CASC19-213ENST00000641162 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
CASC19-213ENST00000641162 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
CASC19-213ENST00000641162 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
CASC19-213ENST00000641162 FBLN2P98095 1184 aa12.9□□□□□ -0.34
CASC19-213ENST00000641162 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
CASC19-213ENST00000641162 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
CASC19-213ENST00000641162 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
CASC19-213ENST00000641162 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
CASC19-213ENST00000641162 HAX1O00165 279 aa12.68□□□□□ -0.38
CASC19-213ENST00000641162 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
CASC19-213ENST00000641162 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
CASC19-213ENST00000641162 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
CASC19-213ENST00000641162 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
CASC19-213ENST00000641162 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
CASC19-213ENST00000641162 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
CASC19-213ENST00000641162 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
CASC19-213ENST00000641162 EVX2Q03828 476 aa12.47□□□□□ -0.41
CASC19-213ENST00000641162 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASC19-213ENST00000641162 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
CASC19-213ENST00000641162 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
CASC19-213ENST00000641162 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
CASC19-213ENST00000641162 GABBR2O75899 941 aa12.24□□□□□ -0.45
CASC19-213ENST00000641162 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
CASC19-213ENST00000641162 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
CASC19-213ENST00000641162 CLCN6P51797 869 aa12.16□□□□□ -0.46
CASC19-213ENST00000641162 CD44P16070 742 aaKnown RBP12.15□□□□□ -0.46
CASC19-213ENST00000641162 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
CASC19-213ENST00000641162 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
CASC19-213ENST00000641162 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
CASC19-213ENST00000641162 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
CASC19-213ENST00000641162 ABCC9O60706 1549 aa12.04□□□□□ -0.48
CASC19-213ENST00000641162 LHX8Q68G74 356 aa12.01□□□□□ -0.49
CASC19-213ENST00000641162 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
CASC19-213ENST00000641162 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
CASC19-213ENST00000641162 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
CASC19-213ENST00000641162 DCBLD2Q96PD2 775 aa11.9□□□□□ -0.5
CASC19-213ENST00000641162 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
CASC19-213ENST00000641162 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
CASC19-213ENST00000641162 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
CASC19-213ENST00000641162 PROM2Q8N271 834 aa11.84□□□□□ -0.51
CASC19-213ENST00000641162 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
CASC19-213ENST00000641162 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
CASC19-213ENST00000641162 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
CASC19-213ENST00000641162 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms