RNA–Protein interactions for RNA: ENST00000641704.1

CASC19-252, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,313 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-252ENST00000641704 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
CASC19-252ENST00000641704 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
CASC19-252ENST00000641704 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
CASC19-252ENST00000641704 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
CASC19-252ENST00000641704 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
CASC19-252ENST00000641704 FOXD1Q16676 465 aa16.83■□□□□ 0.28
CASC19-252ENST00000641704 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
CASC19-252ENST00000641704 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
CASC19-252ENST00000641704 MSH5O43196 834 aa16.09■□□□□ 0.17
CASC19-252ENST00000641704 ABCC9O60706 1549 aa15.72■□□□□ 0.11
CASC19-252ENST00000641704 ZCCHC6Q5VYS8 1495 aaKnown RBP15.67■□□□□ 0.1
CASC19-252ENST00000641704 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
CASC19-252ENST00000641704 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
CASC19-252ENST00000641704 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
CASC19-252ENST00000641704 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
CASC19-252ENST00000641704 NACADO15069 1562 aa15.42■□□□□ 0.06
CASC19-252ENST00000641704 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
CASC19-252ENST00000641704 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
CASC19-252ENST00000641704 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
CASC19-252ENST00000641704 ADRA2BP18089 450 aa15.14■□□□□ 0.01
CASC19-252ENST00000641704 SCRIBQ14160 1630 aa15.05■□□□□ -0
CASC19-252ENST00000641704 SHROOM4Q9ULL8 1493 aa15.03■□□□□ -0
CASC19-252ENST00000641704 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
CASC19-252ENST00000641704 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
CASC19-252ENST00000641704 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
CASC19-252ENST00000641704 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.09
CASC19-252ENST00000641704 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.09
CASC19-252ENST00000641704 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
CASC19-252ENST00000641704 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
CASC19-252ENST00000641704 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
CASC19-252ENST00000641704 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
CASC19-252ENST00000641704 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
CASC19-252ENST00000641704 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
CASC19-252ENST00000641704 PEG3Q9GZU2 1588 aa14.27□□□□□ -0.12
CASC19-252ENST00000641704 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
CASC19-252ENST00000641704 WIZO95785 1651 aa14.24□□□□□ -0.13
CASC19-252ENST00000641704 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
CASC19-252ENST00000641704 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
CASC19-252ENST00000641704 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.14
CASC19-252ENST00000641704 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
CASC19-252ENST00000641704 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
CASC19-252ENST00000641704 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
CASC19-252ENST00000641704 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
CASC19-252ENST00000641704 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
CASC19-252ENST00000641704 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
CASC19-252ENST00000641704 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
CASC19-252ENST00000641704 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
CASC19-252ENST00000641704 CADPSQ9ULU8 1353 aa13.82□□□□□ -0.2
CASC19-252ENST00000641704 CFTRP13569 1480 aa13.81□□□□□ -0.2
CASC19-252ENST00000641704 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
CASC19-252ENST00000641704 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
CASC19-252ENST00000641704 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
CASC19-252ENST00000641704 PRDM2Q13029 1718 aa13.71□□□□□ -0.22
CASC19-252ENST00000641704 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
CASC19-252ENST00000641704 NESP48681 1621 aa13.67□□□□□ -0.22
CASC19-252ENST00000641704 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
CASC19-252ENST00000641704 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
CASC19-252ENST00000641704 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
CASC19-252ENST00000641704 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
CASC19-252ENST00000641704 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
CASC19-252ENST00000641704 ABCC8Q09428 1581 aa13.58□□□□□ -0.24
CASC19-252ENST00000641704 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.24
CASC19-252ENST00000641704 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.25
CASC19-252ENST00000641704 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
CASC19-252ENST00000641704 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
CASC19-252ENST00000641704 BIVM-ERCC5R4GMW8 1640 aa13.48□□□□□ -0.25
CASC19-252ENST00000641704 CUX1P39880 1505 aa13.48□□□□□ -0.25
CASC19-252ENST00000641704 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
CASC19-252ENST00000641704 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
CASC19-252ENST00000641704 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
CASC19-252ENST00000641704 WDR62O43379 1518 aa13.43□□□□□ -0.26
CASC19-252ENST00000641704 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
CASC19-252ENST00000641704 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
CASC19-252ENST00000641704 THOC2Q8NI27 1593 aaKnown RBP13.4□□□□□ -0.26
CASC19-252ENST00000641704 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
CASC19-252ENST00000641704 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
CASC19-252ENST00000641704 EEA1Q15075 1411 aa13.38□□□□□ -0.27
CASC19-252ENST00000641704 SOGA1O94964 1423 aa13.36□□□□□ -0.27
CASC19-252ENST00000641704 HOXD11P31277 338 aaPredicted RBP13.36□□□□□ -0.27
CASC19-252ENST00000641704 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
CASC19-252ENST00000641704 IFT140Q96RY7 1462 aa13.33□□□□□ -0.27
CASC19-252ENST00000641704 ABCA10Q8WWZ4 1543 aa13.31□□□□□ -0.28
CASC19-252ENST00000641704 CUX2O14529 1486 aa13.31□□□□□ -0.28
CASC19-252ENST00000641704 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
CASC19-252ENST00000641704 WDR97A6NE52 1622 aa13.27□□□□□ -0.28
CASC19-252ENST00000641704 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
CASC19-252ENST00000641704 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
CASC19-252ENST00000641704 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
CASC19-252ENST00000641704 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
CASC19-252ENST00000641704 TDRD9Q8NDG6 1382 aaKnown RBP13.21□□□□□ -0.3
CASC19-252ENST00000641704 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
CASC19-252ENST00000641704 ERICH3Q5RHP9 1530 aa13.19□□□□□ -0.3
CASC19-252ENST00000641704 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
CASC19-252ENST00000641704 GRIN2BQ13224 1484 aa13.18□□□□□ -0.3
CASC19-252ENST00000641704 IGF1RP08069 1367 aa13.15□□□□□ -0.3
CASC19-252ENST00000641704 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■■■■□ 24.7
CASC19-252ENST00000641704 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
CASC19-252ENST00000641704 CUL7Q14999 1698 aa13.15□□□□□ -0.3
CASC19-252ENST00000641704 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.31
CASC19-252ENST00000641704 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms