RNA–Protein interactions for RNA: ENST00000371997.3

NCOA3-201, Transcript of nuclear receptor coactivator 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA3, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3-201ENST00000371997 NISCHQ9Y2I1 1504 aa12.11□□□□□ -0.47
NCOA3-201ENST00000371997 CCDC180Q9P1Z9 1646 aa10.78□□□□□ -0.68
NCOA3-201ENST00000371997 ABCC9O60706 1549 aa10.48□□□□□ -0.73
NCOA3-201ENST00000371997 DCAF8L2P0C7V8 631 aa10.2□□□□□ -0.78
NCOA3-201ENST00000371997 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
NCOA3-201ENST00000371997 NACADO15069 1562 aa10.11□□□□□ -0.79
NCOA3-201ENST00000371997 ZCCHC6Q5VYS8 1495 aaKnown RBP10.09□□□□□ -0.79
NCOA3-201ENST00000371997 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
NCOA3-201ENST00000371997 DCAF1Q9Y4B6 1507 aa10□□□□□ -0.81
NCOA3-201ENST00000371997 UNC13AQ9UPW8 1703 aa9.91□□□□□ -0.82
NCOA3-201ENST00000371997 SCRIBQ14160 1630 aa9.86□□□□□ -0.83
NCOA3-201ENST00000371997 PABPN1Q86U42 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
NCOA3-201ENST00000371997 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
NCOA3-201ENST00000371997 SHROOM4Q9ULL8 1493 aa9.67□□□□□ -0.86
NCOA3-201ENST00000371997 EIF4G1Q04637 1599 aaKnown RBP9.52□□□□□ -0.89
NCOA3-201ENST00000371997 DNAJC5BQ9UF47 199 aa9.49□□□□□ -0.89
NCOA3-201ENST00000371997 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
NCOA3-201ENST00000371997 SMARCA4P51532 1647 aa9.41□□□□□ -0.9
NCOA3-201ENST00000371997 CECR2Q9BXF3 1484 aa9.41□□□□□ -0.9
NCOA3-201ENST00000371997 BAZ1AQ9NRL2 1556 aaPredicted RBP9.4□□□□□ -0.9
NCOA3-201ENST00000371997 SMARCA2P51531 1590 aa9.35□□□□□ -0.91
NCOA3-201ENST00000371997 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
NCOA3-201ENST00000371997 ATAD2BQ9ULI0 1458 aa9.31□□□□□ -0.92
NCOA3-201ENST00000371997 NCAPD3P42695 1498 aa9.29□□□□□ -0.92
NCOA3-201ENST00000371997 BAZ1BQ9UIG0 1483 aaKnown RBP9.28□□□□□ -0.92
NCOA3-201ENST00000371997 WIZO95785 1651 aa9.28□□□□□ -0.92
NCOA3-201ENST00000371997 PEG3Q9GZU2 1588 aa9.27□□□□□ -0.92
NCOA3-201ENST00000371997 HMGXB3Q12766 1538 aa9.27□□□□□ -0.93
NCOA3-201ENST00000371997 RSF1Q96T23 1441 aaPredicted RBP9.24□□□□□ -0.93
NCOA3-201ENST00000371997 TOP2AP11388 1531 aaKnown RBP9.17□□□□□ -0.94
NCOA3-201ENST00000371997 SUPT5HO00267 1087 aaKnown RBP9.14□□□□□ -0.95
NCOA3-201ENST00000371997 LAMC3Q9Y6N6 1575 aa9.08□□□□□ -0.96
NCOA3-201ENST00000371997 ERCC6Q03468 1493 aa9.08□□□□□ -0.96
NCOA3-201ENST00000371997 NESP48681 1621 aa9.06□□□□□ -0.96
NCOA3-201ENST00000371997 CCDC88BA6NC98 1476 aa9.05□□□□□ -0.96
NCOA3-201ENST00000371997 CADPSQ9ULU8 1353 aa9.04□□□□□ -0.96
NCOA3-201ENST00000371997 PDS5BQ9NTI5 1447 aa9.02□□□□□ -0.97
NCOA3-201ENST00000371997 PRDM2Q13029 1718 aa9.02□□□□□ -0.97
NCOA3-201ENST00000371997 KIF21AQ7Z4S6 1674 aa9.02□□□□□ -0.97
NCOA3-201ENST00000371997 CFTRP13569 1480 aa8.99□□□□□ -0.97
NCOA3-201ENST00000371997 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.98
NCOA3-201ENST00000371997 FANCD2Q9BXW9 1451 aa8.96□□□□□ -0.98
NCOA3-201ENST00000371997 THOC2Q8NI27 1593 aaKnown RBP8.92□□□□□ -0.98
NCOA3-201ENST00000371997 MRC2Q9UBG0 1479 aa8.92□□□□□ -0.98
NCOA3-201ENST00000371997 CUX2O14529 1486 aa8.91□□□□□ -0.98
NCOA3-201ENST00000371997 WDR62O43379 1518 aa8.87□□□□□ -0.99
NCOA3-201ENST00000371997 ABCC8Q09428 1581 aa8.84□□□□□ -0.99
NCOA3-201ENST00000371997 URB2Q14146 1524 aaKnown RBP8.84□□□□□ -0.99
NCOA3-201ENST00000371997 DNMBPQ6XZF7 1577 aa8.82□□□□□ -1
NCOA3-201ENST00000371997 TOPBP1Q92547 1522 aa8.81□□□□□ -1
NCOA3-201ENST00000371997 CUX1P39880 1505 aa8.76□□□□□ -1.01
NCOA3-201ENST00000371997 IFT140Q96RY7 1462 aa8.76□□□□□ -1.01
NCOA3-201ENST00000371997 WRNQ14191 1432 aaPredicted RBP eCLIP8.74□□□□□ -1.01
NCOA3-201ENST00000371997 FGD5Q6ZNL6 1462 aa8.73□□□□□ -1.01
NCOA3-201ENST00000371997 POLA1P09884 1462 aaPredicted RBP8.73□□□□□ -1.01
NCOA3-201ENST00000371997 SOGA1O94964 1423 aa8.73□□□□□ -1.01
NCOA3-201ENST00000371997 BIVM-ERCC5R4GMW8 1640 aa8.73□□□□□ -1.01
NCOA3-201ENST00000371997 TOP2BQ02880 1626 aa8.72□□□□□ -1.01
NCOA3-201ENST00000371997 SYNJ1O43426 1573 aa8.71□□□□□ -1.02
NCOA3-201ENST00000371997 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
NCOA3-201ENST00000371997 TARBP1Q13395 1621 aaKnown RBP8.7□□□□□ -1.02
NCOA3-201ENST00000371997 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
NCOA3-201ENST00000371997 ZNF608Q9ULD9 1512 aaPredicted RBP8.68□□□□□ -1.02
NCOA3-201ENST00000371997 WDR97A6NE52 1622 aa8.67□□□□□ -1.02
NCOA3-201ENST00000371997 AQRO60306 1485 aaKnown RBP eCLIP8.66□□□□□ -1.022e-6■■■■□ 23.7
NCOA3-201ENST00000371997 TDRD9Q8NDG6 1382 aaKnown RBP8.65□□□□□ -1.03
NCOA3-201ENST00000371997 PBRM1Q86U86 1689 aa8.65□□□□□ -1.03
NCOA3-201ENST00000371997 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
NCOA3-201ENST00000371997 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
NCOA3-201ENST00000371997 GAPVD1Q14C86 1478 aa8.62□□□□□ -1.03
NCOA3-201ENST00000371997 FBLN2P98095 1184 aa8.62□□□□□ -1.03
NCOA3-201ENST00000371997 GRIN2BQ13224 1484 aa8.61□□□□□ -1.03
NCOA3-201ENST00000371997 ABCA5Q8WWZ7 1642 aa8.61□□□□□ -1.03
NCOA3-201ENST00000371997 SNAPC4Q5SXM2 1469 aa8.59□□□□□ -1.03
NCOA3-201ENST00000371997 CHD1O14646 1710 aa8.59□□□□□ -1.03
NCOA3-201ENST00000371997 CHMP7Q8WUX9 453 aaPredicted RBP8.58□□□□□ -1.04
NCOA3-201ENST00000371997 MAGI1Q96QZ7 1491 aaPredicted RBP8.58□□□□□ -1.04
NCOA3-201ENST00000371997 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
NCOA3-201ENST00000371997 KIF27Q86VH2 1401 aa8.57□□□□□ -1.04
NCOA3-201ENST00000371997 ERICH3Q5RHP9 1530 aa8.56□□□□□ -1.04
NCOA3-201ENST00000371997 SYNJ2O15056 1496 aa8.54□□□□□ -1.04
NCOA3-201ENST00000371997 DNAJC5Q9H3Z4 198 aa8.53□□□□□ -1.04
NCOA3-201ENST00000371997 ADAMTS12P58397 1594 aa8.53□□□□□ -1.04
NCOA3-201ENST00000371997 CUL7Q14999 1698 aa8.52□□□□□ -1.04
NCOA3-201ENST00000371997 FHAD1B1AJZ9 1412 aa8.52□□□□□ -1.05
NCOA3-201ENST00000371997 CHIC1Q5VXU3 224 aa8.5□□□□□ -1.05
NCOA3-201ENST00000371997 GRIN2AQ12879 1464 aa8.49□□□□□ -1.05
NCOA3-201ENST00000371997 IGF1RP08069 1367 aa8.49□□□□□ -1.05
NCOA3-201ENST00000371997 RUSC2Q8N2Y8 1516 aa8.47□□□□□ -1.05
NCOA3-201ENST00000371997 CARMIL1Q5VZK9 1371 aa8.47□□□□□ -1.05
NCOA3-201ENST00000371997 FAM9AQ8IZU1 332 aaPredicted RBP8.46□□□□□ -1.06
NCOA3-201ENST00000371997 CEP170Q5SW79 1584 aa8.45□□□□□ -1.06
NCOA3-201ENST00000371997 CLASP1Q7Z460 1538 aa8.44□□□□□ -1.06
NCOA3-201ENST00000371997 EEA1Q15075 1411 aa8.44□□□□□ -1.06
NCOA3-201ENST00000371997 RAPGEF2Q9Y4G8 1499 aa8.43□□□□□ -1.06
NCOA3-201ENST00000371997 RIMBP3CA6NJZ7 1639 aa8.42□□□□□ -1.06
NCOA3-201ENST00000371997 RIMBP3BA6NNM3 1639 aa8.42□□□□□ -1.06
NCOA3-201ENST00000371997 RIMBP3Q9UFD9 1639 aa8.42□□□□□ -1.06
NCOA3-201ENST00000371997 CSRNP3Q8WYN3 585 aa8.42□□□□□ -1.06
NCOA3-201ENST00000371997 NUP160Q12769 1436 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms