RNA–Protein interactions for RNA: ENST00000641106.1

CASC19-211, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,184 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-211ENST00000641106 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CASC19-211ENST00000641106 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
CASC19-211ENST00000641106 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
CASC19-211ENST00000641106 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
CASC19-211ENST00000641106 FOXD1Q16676 465 aa20.94■□□□□ 0.94
CASC19-211ENST00000641106 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
CASC19-211ENST00000641106 MSH5O43196 834 aa19.61■□□□□ 0.73
CASC19-211ENST00000641106 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
CASC19-211ENST00000641106 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
CASC19-211ENST00000641106 ADRA2BP18089 450 aa19.43■□□□□ 0.7
CASC19-211ENST00000641106 POTEDQ86YR6 584 aa19.38■□□□□ 0.69
CASC19-211ENST00000641106 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
CASC19-211ENST00000641106 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
CASC19-211ENST00000641106 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
CASC19-211ENST00000641106 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
CASC19-211ENST00000641106 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
CASC19-211ENST00000641106 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
CASC19-211ENST00000641106 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
CASC19-211ENST00000641106 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
CASC19-211ENST00000641106 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
CASC19-211ENST00000641106 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
CASC19-211ENST00000641106 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
CASC19-211ENST00000641106 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
CASC19-211ENST00000641106 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
CASC19-211ENST00000641106 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
CASC19-211ENST00000641106 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
CASC19-211ENST00000641106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
CASC19-211ENST00000641106 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
CASC19-211ENST00000641106 ABCC9O60706 1549 aa16.09■□□□□ 0.17
CASC19-211ENST00000641106 KCNA4P22459 653 aa15.98■□□□□ 0.15
CASC19-211ENST00000641106 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
CASC19-211ENST00000641106 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
CASC19-211ENST00000641106 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
CASC19-211ENST00000641106 CAPN15O75808 1086 aa15.68■□□□□ 0.1
CASC19-211ENST00000641106 DSG3P32926 999 aa15.64■□□□□ 0.09
CASC19-211ENST00000641106 APLP2Q06481 763 aa15.41■□□□□ 0.06
CASC19-211ENST00000641106 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
CASC19-211ENST00000641106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
CASC19-211ENST00000641106 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
CASC19-211ENST00000641106 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
CASC19-211ENST00000641106 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
CASC19-211ENST00000641106 ABCB7O75027 752 aa15.32■□□□□ 0.04
CASC19-211ENST00000641106 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
CASC19-211ENST00000641106 NACADO15069 1562 aa15.24■□□□□ 0.03
CASC19-211ENST00000641106 POTEHQ6S545 545 aa15.15■□□□□ 0.02
CASC19-211ENST00000641106 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
CASC19-211ENST00000641106 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
CASC19-211ENST00000641106 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
CASC19-211ENST00000641106 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
CASC19-211ENST00000641106 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
CASC19-211ENST00000641106 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
CASC19-211ENST00000641106 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
CASC19-211ENST00000641106 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
CASC19-211ENST00000641106 POLA2Q14181 598 aa14.98□□□□□ -0.01
CASC19-211ENST00000641106 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
CASC19-211ENST00000641106 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
CASC19-211ENST00000641106 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
CASC19-211ENST00000641106 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
CASC19-211ENST00000641106 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
CASC19-211ENST00000641106 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
CASC19-211ENST00000641106 ZBTB22O15209 634 aa14.71□□□□□ -0.05
CASC19-211ENST00000641106 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
CASC19-211ENST00000641106 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
CASC19-211ENST00000641106 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
CASC19-211ENST00000641106 CC2D2AQ9P2K1 1620 aa14.57□□□□□ -0.08
CASC19-211ENST00000641106 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
CASC19-211ENST00000641106 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
CASC19-211ENST00000641106 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
CASC19-211ENST00000641106 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
CASC19-211ENST00000641106 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
CASC19-211ENST00000641106 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
CASC19-211ENST00000641106 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
CASC19-211ENST00000641106 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
CASC19-211ENST00000641106 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
CASC19-211ENST00000641106 FBLN2P98095 1184 aa14.23□□□□□ -0.13
CASC19-211ENST00000641106 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
CASC19-211ENST00000641106 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
CASC19-211ENST00000641106 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
CASC19-211ENST00000641106 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
CASC19-211ENST00000641106 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
CASC19-211ENST00000641106 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
CASC19-211ENST00000641106 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
CASC19-211ENST00000641106 NCAPD3P42695 1498 aa14.07□□□□□ -0.16
CASC19-211ENST00000641106 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
CASC19-211ENST00000641106 HAX1O00165 279 aa14.03□□□□□ -0.16
CASC19-211ENST00000641106 HMGXB3Q12766 1538 aa14□□□□□ -0.17
CASC19-211ENST00000641106 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
CASC19-211ENST00000641106 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
CASC19-211ENST00000641106 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
CASC19-211ENST00000641106 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
CASC19-211ENST00000641106 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
CASC19-211ENST00000641106 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.18
CASC19-211ENST00000641106 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
CASC19-211ENST00000641106 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
CASC19-211ENST00000641106 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
CASC19-211ENST00000641106 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
CASC19-211ENST00000641106 EVX2Q03828 476 aa13.89□□□□□ -0.19
CASC19-211ENST00000641106 NESP48681 1621 aa13.89□□□□□ -0.19
CASC19-211ENST00000641106 CUX2O14529 1486 aa13.84□□□□□ -0.19
CASC19-211ENST00000641106 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms