RNA–Protein interactions for RNA: ENST00000641060.1

CASC19-209, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-209ENST00000641060 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
CASC19-209ENST00000641060 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
CASC19-209ENST00000641060 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
CASC19-209ENST00000641060 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
CASC19-209ENST00000641060 FOXD1Q16676 465 aa16.83■□□□□ 0.28
CASC19-209ENST00000641060 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
CASC19-209ENST00000641060 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
CASC19-209ENST00000641060 MSH5O43196 834 aa15.81■□□□□ 0.12
CASC19-209ENST00000641060 ADRA2BP18089 450 aa15.78■□□□□ 0.12
CASC19-209ENST00000641060 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
CASC19-209ENST00000641060 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
CASC19-209ENST00000641060 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
CASC19-209ENST00000641060 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
CASC19-209ENST00000641060 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
CASC19-209ENST00000641060 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
CASC19-209ENST00000641060 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
CASC19-209ENST00000641060 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
CASC19-209ENST00000641060 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
CASC19-209ENST00000641060 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
CASC19-209ENST00000641060 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
CASC19-209ENST00000641060 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
CASC19-209ENST00000641060 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
CASC19-209ENST00000641060 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
CASC19-209ENST00000641060 KCNA4P22459 653 aa13.36□□□□□ -0.27
CASC19-209ENST00000641060 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
CASC19-209ENST00000641060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
CASC19-209ENST00000641060 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
CASC19-209ENST00000641060 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
CASC19-209ENST00000641060 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
CASC19-209ENST00000641060 CAPN15O75808 1086 aa12.83□□□□□ -0.36
CASC19-209ENST00000641060 APLP2Q06481 763 aa12.76□□□□□ -0.37
CASC19-209ENST00000641060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
CASC19-209ENST00000641060 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
CASC19-209ENST00000641060 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
CASC19-209ENST00000641060 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
CASC19-209ENST00000641060 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
CASC19-209ENST00000641060 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
CASC19-209ENST00000641060 DSG3P32926 999 aa12.61□□□□□ -0.39
CASC19-209ENST00000641060 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
CASC19-209ENST00000641060 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
CASC19-209ENST00000641060 ABCB7O75027 752 aa12.5□□□□□ -0.41
CASC19-209ENST00000641060 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
CASC19-209ENST00000641060 POLA2Q14181 598 aa12.27□□□□□ -0.45
CASC19-209ENST00000641060 ZBTB22O15209 634 aa12.21□□□□□ -0.45
CASC19-209ENST00000641060 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
CASC19-209ENST00000641060 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
CASC19-209ENST00000641060 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
CASC19-209ENST00000641060 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
CASC19-209ENST00000641060 POTEHQ6S545 545 aa11.96□□□□□ -0.49
CASC19-209ENST00000641060 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
CASC19-209ENST00000641060 FBLN2P98095 1184 aa11.86□□□□□ -0.51
CASC19-209ENST00000641060 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
CASC19-209ENST00000641060 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
CASC19-209ENST00000641060 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
CASC19-209ENST00000641060 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
CASC19-209ENST00000641060 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
CASC19-209ENST00000641060 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
CASC19-209ENST00000641060 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
CASC19-209ENST00000641060 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
CASC19-209ENST00000641060 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
CASC19-209ENST00000641060 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
CASC19-209ENST00000641060 PITPNM1O00562 1244 aa11.57□□□□□ -0.56
CASC19-209ENST00000641060 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
CASC19-209ENST00000641060 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
CASC19-209ENST00000641060 SPDYE1Q8NFV5 336 aaPredicted RBP11.48□□□□□ -0.57
CASC19-209ENST00000641060 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
CASC19-209ENST00000641060 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.58
CASC19-209ENST00000641060 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
CASC19-209ENST00000641060 HAX1O00165 279 aa11.34□□□□□ -0.59
CASC19-209ENST00000641060 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
CASC19-209ENST00000641060 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
CASC19-209ENST00000641060 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
CASC19-209ENST00000641060 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
CASC19-209ENST00000641060 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
CASC19-209ENST00000641060 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
CASC19-209ENST00000641060 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
CASC19-209ENST00000641060 EVX2Q03828 476 aa11.05□□□□□ -0.64
CASC19-209ENST00000641060 FARP1Q9Y4F1 1045 aaPredicted RBP11.03□□□□□ -0.64
CASC19-209ENST00000641060 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
CASC19-209ENST00000641060 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
CASC19-209ENST00000641060 GABBR2O75899 941 aa10.88□□□□□ -0.67
CASC19-209ENST00000641060 PAK3O75914 559 aaPredicted RBP10.86□□□□□ -0.67
CASC19-209ENST00000641060 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
CASC19-209ENST00000641060 ZRANB1Q9UGI0 708 aa10.84□□□□□ -0.67
CASC19-209ENST00000641060 PROM2Q8N271 834 aa10.83□□□□□ -0.68
CASC19-209ENST00000641060 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
CASC19-209ENST00000641060 CLCN6P51797 869 aa10.79□□□□□ -0.68
CASC19-209ENST00000641060 FKBP8Q14318 412 aa10.78□□□□□ -0.68
CASC19-209ENST00000641060 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
CASC19-209ENST00000641060 MIER1Q8N108 512 aa10.74□□□□□ -0.69
CASC19-209ENST00000641060 DCBLD2Q96PD2 775 aa10.72□□□□□ -0.69
CASC19-209ENST00000641060 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
CASC19-209ENST00000641060 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
CASC19-209ENST00000641060 PHF12Q96QT6 1004 aa10.66□□□□□ -0.7
CASC19-209ENST00000641060 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
CASC19-209ENST00000641060 GALR2O43603 387 aaPredicted RBP10.62□□□□□ -0.71
CASC19-209ENST00000641060 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
CASC19-209ENST00000641060 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
CASC19-209ENST00000641060 LHX8Q68G74 356 aa10.58□□□□□ -0.72
CASC19-209ENST00000641060 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms