RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
CASC19-247ENST00000641642 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
CASC19-247ENST00000641642 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
CASC19-247ENST00000641642 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
CASC19-247ENST00000641642 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CASC19-247ENST00000641642 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
CASC19-247ENST00000641642 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
CASC19-247ENST00000641642 MSH5O43196 834 aa23.73■■□□□ 1.39
CASC19-247ENST00000641642 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
CASC19-247ENST00000641642 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
CASC19-247ENST00000641642 ADRA2BP18089 450 aa23.54■■□□□ 1.36
CASC19-247ENST00000641642 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
CASC19-247ENST00000641642 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
CASC19-247ENST00000641642 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CASC19-247ENST00000641642 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
CASC19-247ENST00000641642 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
CASC19-247ENST00000641642 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
CASC19-247ENST00000641642 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
CASC19-247ENST00000641642 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
CASC19-247ENST00000641642 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
CASC19-247ENST00000641642 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
CASC19-247ENST00000641642 ABCC9O60706 1549 aa20.45■□□□□ 0.86
CASC19-247ENST00000641642 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
CASC19-247ENST00000641642 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
CASC19-247ENST00000641642 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
CASC19-247ENST00000641642 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
CASC19-247ENST00000641642 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
CASC19-247ENST00000641642 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
CASC19-247ENST00000641642 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
CASC19-247ENST00000641642 NACADO15069 1562 aa20.07■□□□□ 0.8
CASC19-247ENST00000641642 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
CASC19-247ENST00000641642 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
CASC19-247ENST00000641642 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
CASC19-247ENST00000641642 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
CASC19-247ENST00000641642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
CASC19-247ENST00000641642 KCNA4P22459 653 aa19.59■□□□□ 0.73
CASC19-247ENST00000641642 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
CASC19-247ENST00000641642 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
CASC19-247ENST00000641642 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
CASC19-247ENST00000641642 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
CASC19-247ENST00000641642 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
CASC19-247ENST00000641642 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
CASC19-247ENST00000641642 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
CASC19-247ENST00000641642 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
CASC19-247ENST00000641642 CAPN15O75808 1086 aa18.95■□□□□ 0.62
CASC19-247ENST00000641642 DSG3P32926 999 aa18.95■□□□□ 0.62
CASC19-247ENST00000641642 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
CASC19-247ENST00000641642 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
CASC19-247ENST00000641642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
CASC19-247ENST00000641642 APLP2Q06481 763 aa18.77■□□□□ 0.6
CASC19-247ENST00000641642 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
CASC19-247ENST00000641642 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
CASC19-247ENST00000641642 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
CASC19-247ENST00000641642 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
CASC19-247ENST00000641642 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
CASC19-247ENST00000641642 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.58
CASC19-247ENST00000641642 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
CASC19-247ENST00000641642 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
CASC19-247ENST00000641642 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
CASC19-247ENST00000641642 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
CASC19-247ENST00000641642 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
CASC19-247ENST00000641642 ATAD2BQ9ULI0 1458 aa18.53■□□□□ 0.56
CASC19-247ENST00000641642 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
CASC19-247ENST00000641642 ABCB7O75027 752 aa18.51■□□□□ 0.55
CASC19-247ENST00000641642 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
CASC19-247ENST00000641642 WIZO95785 1651 aa18.45■□□□□ 0.54
CASC19-247ENST00000641642 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
CASC19-247ENST00000641642 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
CASC19-247ENST00000641642 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.54
CASC19-247ENST00000641642 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
CASC19-247ENST00000641642 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
CASC19-247ENST00000641642 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
CASC19-247ENST00000641642 POTEHQ6S545 545 aa18.18■□□□□ 0.5
CASC19-247ENST00000641642 POLA2Q14181 598 aa18.17■□□□□ 0.5
CASC19-247ENST00000641642 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
CASC19-247ENST00000641642 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
CASC19-247ENST00000641642 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
CASC19-247ENST00000641642 ZBTB22O15209 634 aa18.05■□□□□ 0.48
CASC19-247ENST00000641642 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
CASC19-247ENST00000641642 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
CASC19-247ENST00000641642 CFTRP13569 1480 aa17.95■□□□□ 0.46
CASC19-247ENST00000641642 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
CASC19-247ENST00000641642 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
CASC19-247ENST00000641642 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
CASC19-247ENST00000641642 NESP48681 1621 aa17.8■□□□□ 0.44
CASC19-247ENST00000641642 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
CASC19-247ENST00000641642 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
CASC19-247ENST00000641642 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
CASC19-247ENST00000641642 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
CASC19-247ENST00000641642 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
CASC19-247ENST00000641642 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
CASC19-247ENST00000641642 KIF21AQ7Z4S6 1674 aa17.63■□□□□ 0.41
CASC19-247ENST00000641642 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
CASC19-247ENST00000641642 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
CASC19-247ENST00000641642 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
CASC19-247ENST00000641642 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CASC19-247ENST00000641642 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
CASC19-247ENST00000641642 WDR62O43379 1518 aa17.5■□□□□ 0.39
CASC19-247ENST00000641642 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
CASC19-247ENST00000641642 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms