RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
CASC19-247ENST00000641642 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
CASC19-247ENST00000641642 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
CASC19-247ENST00000641642 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
CASC19-247ENST00000641642 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CASC19-247ENST00000641642 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
CASC19-247ENST00000641642 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
CASC19-247ENST00000641642 MSH5O43196 834 aa23.73■■□□□ 1.39
CASC19-247ENST00000641642 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
CASC19-247ENST00000641642 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
CASC19-247ENST00000641642 ADRA2BP18089 450 aa23.54■■□□□ 1.36
CASC19-247ENST00000641642 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
CASC19-247ENST00000641642 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
CASC19-247ENST00000641642 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CASC19-247ENST00000641642 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
CASC19-247ENST00000641642 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
CASC19-247ENST00000641642 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
CASC19-247ENST00000641642 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
CASC19-247ENST00000641642 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
CASC19-247ENST00000641642 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
CASC19-247ENST00000641642 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
CASC19-247ENST00000641642 ABCC9O60706 1549 aa20.45■□□□□ 0.86
CASC19-247ENST00000641642 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
CASC19-247ENST00000641642 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
CASC19-247ENST00000641642 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
CASC19-247ENST00000641642 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
CASC19-247ENST00000641642 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
CASC19-247ENST00000641642 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
CASC19-247ENST00000641642 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
CASC19-247ENST00000641642 NACADO15069 1562 aa20.07■□□□□ 0.8
CASC19-247ENST00000641642 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
CASC19-247ENST00000641642 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
CASC19-247ENST00000641642 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
CASC19-247ENST00000641642 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
CASC19-247ENST00000641642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
CASC19-247ENST00000641642 KCNA4P22459 653 aa19.59■□□□□ 0.73
CASC19-247ENST00000641642 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
CASC19-247ENST00000641642 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
CASC19-247ENST00000641642 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
CASC19-247ENST00000641642 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
CASC19-247ENST00000641642 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
CASC19-247ENST00000641642 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
CASC19-247ENST00000641642 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
CASC19-247ENST00000641642 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
CASC19-247ENST00000641642 CAPN15O75808 1086 aa18.95■□□□□ 0.62
CASC19-247ENST00000641642 DSG3P32926 999 aa18.95■□□□□ 0.62
CASC19-247ENST00000641642 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
CASC19-247ENST00000641642 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
CASC19-247ENST00000641642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
CASC19-247ENST00000641642 APLP2Q06481 763 aa18.77■□□□□ 0.6
CASC19-247ENST00000641642 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
CASC19-247ENST00000641642 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
CASC19-247ENST00000641642 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
CASC19-247ENST00000641642 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
CASC19-247ENST00000641642 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
CASC19-247ENST00000641642 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.58
CASC19-247ENST00000641642 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
CASC19-247ENST00000641642 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
CASC19-247ENST00000641642 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
CASC19-247ENST00000641642 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
CASC19-247ENST00000641642 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
CASC19-247ENST00000641642 ATAD2BQ9ULI0 1458 aa18.53■□□□□ 0.56
CASC19-247ENST00000641642 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
CASC19-247ENST00000641642 ABCB7O75027 752 aa18.51■□□□□ 0.55
CASC19-247ENST00000641642 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
CASC19-247ENST00000641642 WIZO95785 1651 aa18.45■□□□□ 0.54
CASC19-247ENST00000641642 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
CASC19-247ENST00000641642 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
CASC19-247ENST00000641642 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.54
CASC19-247ENST00000641642 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
CASC19-247ENST00000641642 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
CASC19-247ENST00000641642 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
CASC19-247ENST00000641642 POTEHQ6S545 545 aa18.18■□□□□ 0.5
CASC19-247ENST00000641642 POLA2Q14181 598 aa18.17■□□□□ 0.5
CASC19-247ENST00000641642 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
CASC19-247ENST00000641642 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
CASC19-247ENST00000641642 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
CASC19-247ENST00000641642 ZBTB22O15209 634 aa18.05■□□□□ 0.48
CASC19-247ENST00000641642 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
CASC19-247ENST00000641642 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
CASC19-247ENST00000641642 CFTRP13569 1480 aa17.95■□□□□ 0.46
CASC19-247ENST00000641642 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
CASC19-247ENST00000641642 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
CASC19-247ENST00000641642 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
CASC19-247ENST00000641642 NESP48681 1621 aa17.8■□□□□ 0.44
CASC19-247ENST00000641642 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
CASC19-247ENST00000641642 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
CASC19-247ENST00000641642 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
CASC19-247ENST00000641642 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
CASC19-247ENST00000641642 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
CASC19-247ENST00000641642 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
CASC19-247ENST00000641642 KIF21AQ7Z4S6 1674 aa17.63■□□□□ 0.41
CASC19-247ENST00000641642 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
CASC19-247ENST00000641642 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
CASC19-247ENST00000641642 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
CASC19-247ENST00000641642 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CASC19-247ENST00000641642 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
CASC19-247ENST00000641642 WDR62O43379 1518 aa17.5■□□□□ 0.39
CASC19-247ENST00000641642 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
CASC19-247ENST00000641642 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms