RNA–Protein interactions for RNA: ENST00000642142.1

CASC19-284, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,868 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-284ENST00000642142 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.41
CASC19-284ENST00000642142 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
CASC19-284ENST00000642142 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
CASC19-284ENST00000642142 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
CASC19-284ENST00000642142 FOXD1Q16676 465 aa14.04□□□□□ -0.16
CASC19-284ENST00000642142 MSH5O43196 834 aa13.22□□□□□ -0.29
CASC19-284ENST00000642142 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
CASC19-284ENST00000642142 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
CASC19-284ENST00000642142 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
CASC19-284ENST00000642142 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
CASC19-284ENST00000642142 ADRA2BP18089 450 aa12.97□□□□□ -0.33
CASC19-284ENST00000642142 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
CASC19-284ENST00000642142 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
CASC19-284ENST00000642142 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
CASC19-284ENST00000642142 KCNA4P22459 653 aa11.89□□□□□ -0.51
CASC19-284ENST00000642142 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
CASC19-284ENST00000642142 SLC24A1O60721 1099 aa11.71□□□□□ -0.53
CASC19-284ENST00000642142 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
CASC19-284ENST00000642142 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
CASC19-284ENST00000642142 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
CASC19-284ENST00000642142 CACNB1Q02641 598 aaPredicted RBP11.49□□□□□ -0.57
CASC19-284ENST00000642142 SLC4A1APQ9BWU0 796 aaKnown RBP11.43□□□□□ -0.58
CASC19-284ENST00000642142 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
CASC19-284ENST00000642142 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
CASC19-284ENST00000642142 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
CASC19-284ENST00000642142 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
CASC19-284ENST00000642142 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
CASC19-284ENST00000642142 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
CASC19-284ENST00000642142 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
CASC19-284ENST00000642142 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
CASC19-284ENST00000642142 ZBTB22O15209 634 aa11□□□□□ -0.65
CASC19-284ENST00000642142 DNAJC5BQ9UF47 199 aa10.97□□□□□ -0.65
CASC19-284ENST00000642142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
CASC19-284ENST00000642142 NPM3O75607 178 aaKnown RBP10.87□□□□□ -0.67
CASC19-284ENST00000642142 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
CASC19-284ENST00000642142 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
CASC19-284ENST00000642142 CAPN15O75808 1086 aa10.57□□□□□ -0.72
CASC19-284ENST00000642142 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
CASC19-284ENST00000642142 DSG3P32926 999 aa10.49□□□□□ -0.73
CASC19-284ENST00000642142 FKBP8Q14318 412 aa10.47□□□□□ -0.73
CASC19-284ENST00000642142 SLC4A2P04920 1241 aa10.38□□□□□ -0.75
CASC19-284ENST00000642142 TRHP20396 242 aaPredicted RBP10.36□□□□□ -0.75
CASC19-284ENST00000642142 APLP2Q06481 763 aa10.33□□□□□ -0.76
CASC19-284ENST00000642142 POTEHQ6S545 545 aa10.32□□□□□ -0.76
CASC19-284ENST00000642142 PRKCSHP14314 528 aaPredicted RBP10.32□□□□□ -0.76
CASC19-284ENST00000642142 ABCB7O75027 752 aa10.3□□□□□ -0.76
CASC19-284ENST00000642142 ZNF219Q9P2Y4 722 aaPredicted RBP10.3□□□□□ -0.76
CASC19-284ENST00000642142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.76
CASC19-284ENST00000642142 PLCB2Q00722 1185 aa10.27□□□□□ -0.76
CASC19-284ENST00000642142 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.76
CASC19-284ENST00000642142 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.78
CASC19-284ENST00000642142 BCANQ96GW7 911 aa10.18□□□□□ -0.78
CASC19-284ENST00000642142 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
CASC19-284ENST00000642142 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
CASC19-284ENST00000642142 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
CASC19-284ENST00000642142 MYCNP04198 464 aaPredicted RBP10.06□□□□□ -0.8
CASC19-284ENST00000642142 RBM42Q9BTD8 480 aaKnown RBP10.03□□□□□ -0.8
CASC19-284ENST00000642142 POLA2Q14181 598 aa10.01□□□□□ -0.81
CASC19-284ENST00000642142 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
CASC19-284ENST00000642142 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
CASC19-284ENST00000642142 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
CASC19-284ENST00000642142 CHRDL2Q6WN34 429 aa9.88□□□□□ -0.83
CASC19-284ENST00000642142 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
CASC19-284ENST00000642142 DCAF8L2P0C7V8 631 aa9.84□□□□□ -0.83
CASC19-284ENST00000642142 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
CASC19-284ENST00000642142 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
CASC19-284ENST00000642142 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
CASC19-284ENST00000642142 TULP1O00294 542 aaPredicted RBP9.77□□□□□ -0.85
CASC19-284ENST00000642142 FBLN2P98095 1184 aa9.76□□□□□ -0.85
CASC19-284ENST00000642142 ARXQ96QS3 562 aa9.76□□□□□ -0.85
CASC19-284ENST00000642142 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
CASC19-284ENST00000642142 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
CASC19-284ENST00000642142 OSCARQ8IYS5 282 aa9.71□□□□□ -0.85
CASC19-284ENST00000642142 PKD2Q13563 968 aa9.68□□□□□ -0.86
CASC19-284ENST00000642142 REM2Q8IYK8 340 aaPredicted RBP9.66□□□□□ -0.86
CASC19-284ENST00000642142 VASPP50552 380 aaPredicted RBP9.66□□□□□ -0.86
CASC19-284ENST00000642142 GTF3C3Q9Y5Q9 886 aa9.64□□□□□ -0.87
CASC19-284ENST00000642142 IFNLR1Q8IU57 520 aaPredicted RBP9.64□□□□□ -0.87
CASC19-284ENST00000642142 NISCHQ9Y2I1 1504 aa9.63□□□□□ -0.87
CASC19-284ENST00000642142 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
CASC19-284ENST00000642142 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.61□□□□□ -0.87
CASC19-284ENST00000642142 PAXIP1Q6ZW49 1069 aaPredicted RBP9.6□□□□□ -0.87
CASC19-284ENST00000642142 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
CASC19-284ENST00000642142 SP7Q8TDD2 431 aaPredicted RBP9.59□□□□□ -0.87
CASC19-284ENST00000642142 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
CASC19-284ENST00000642142 PITPNM1O00562 1244 aa9.57□□□□□ -0.88
CASC19-284ENST00000642142 NPM1P06748 294 aaKnown RBP eCLIP9.56□□□□□ -0.88
CASC19-284ENST00000642142 PROM2Q8N271 834 aa9.53□□□□□ -0.88
CASC19-284ENST00000642142 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
CASC19-284ENST00000642142 HAX1O00165 279 aa9.52□□□□□ -0.89
CASC19-284ENST00000642142 HOMEZQ8IX15 550 aa9.51□□□□□ -0.89
CASC19-284ENST00000642142 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
CASC19-284ENST00000642142 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
CASC19-284ENST00000642142 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
CASC19-284ENST00000642142 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
CASC19-284ENST00000642142 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
CASC19-284ENST00000642142 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
CASC19-284ENST00000642142 SPDYE2Q495Y8 402 aa9.45□□□□□ -0.9
CASC19-284ENST00000642142 NBR1Q14596 966 aa9.45□□□□□ -0.9
CASC19-284ENST00000642142 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms