RNA–Protein interactions for RNA: ENST00000641681.1

CASC19-249, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 871 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-249ENST00000641681 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
CASC19-249ENST00000641681 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
CASC19-249ENST00000641681 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
CASC19-249ENST00000641681 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
CASC19-249ENST00000641681 FOXD1Q16676 465 aa19.67■□□□□ 0.74
CASC19-249ENST00000641681 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
CASC19-249ENST00000641681 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
CASC19-249ENST00000641681 MSH5O43196 834 aa18.39■□□□□ 0.53
CASC19-249ENST00000641681 ADRA2BP18089 450 aa18.36■□□□□ 0.53
CASC19-249ENST00000641681 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
CASC19-249ENST00000641681 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
CASC19-249ENST00000641681 MAPK8IP2Q13387 824 aaPredicted RBP16.85■□□□□ 0.29
CASC19-249ENST00000641681 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
CASC19-249ENST00000641681 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
CASC19-249ENST00000641681 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
CASC19-249ENST00000641681 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
CASC19-249ENST00000641681 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
CASC19-249ENST00000641681 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
CASC19-249ENST00000641681 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
CASC19-249ENST00000641681 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
CASC19-249ENST00000641681 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
CASC19-249ENST00000641681 NPM3O75607 178 aaKnown RBP15.69■□□□□ 0.1
CASC19-249ENST00000641681 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
CASC19-249ENST00000641681 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
CASC19-249ENST00000641681 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
CASC19-249ENST00000641681 NISCHQ9Y2I1 1504 aa15.43■□□□□ 0.06
CASC19-249ENST00000641681 KCNA4P22459 653 aa15.42■□□□□ 0.06
CASC19-249ENST00000641681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
CASC19-249ENST00000641681 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
CASC19-249ENST00000641681 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
CASC19-249ENST00000641681 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
CASC19-249ENST00000641681 CAPN15O75808 1086 aa14.75□□□□□ -0.05
CASC19-249ENST00000641681 DSG3P32926 999 aa14.72□□□□□ -0.05
CASC19-249ENST00000641681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
CASC19-249ENST00000641681 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
CASC19-249ENST00000641681 APLP2Q06481 763 aa14.64□□□□□ -0.07
CASC19-249ENST00000641681 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
CASC19-249ENST00000641681 SLC4A1APQ9BWU0 796 aaKnown RBP14.55□□□□□ -0.08
CASC19-249ENST00000641681 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
CASC19-249ENST00000641681 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
CASC19-249ENST00000641681 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
CASC19-249ENST00000641681 ABCB7O75027 752 aa14.4□□□□□ -0.1
CASC19-249ENST00000641681 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
CASC19-249ENST00000641681 ZBTB22O15209 634 aa14.2□□□□□ -0.14
CASC19-249ENST00000641681 POLA2Q14181 598 aa14.19□□□□□ -0.14
CASC19-249ENST00000641681 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
CASC19-249ENST00000641681 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
CASC19-249ENST00000641681 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
CASC19-249ENST00000641681 POTEHQ6S545 545 aa13.98□□□□□ -0.17
CASC19-249ENST00000641681 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
CASC19-249ENST00000641681 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
CASC19-249ENST00000641681 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
CASC19-249ENST00000641681 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
CASC19-249ENST00000641681 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
CASC19-249ENST00000641681 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
CASC19-249ENST00000641681 FBLN2P98095 1184 aa13.58□□□□□ -0.24
CASC19-249ENST00000641681 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
CASC19-249ENST00000641681 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
CASC19-249ENST00000641681 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
CASC19-249ENST00000641681 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
CASC19-249ENST00000641681 CCDC180Q9P1Z9 1646 aa13.43□□□□□ -0.26
CASC19-249ENST00000641681 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
CASC19-249ENST00000641681 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
CASC19-249ENST00000641681 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
CASC19-249ENST00000641681 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
CASC19-249ENST00000641681 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
CASC19-249ENST00000641681 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
CASC19-249ENST00000641681 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
CASC19-249ENST00000641681 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
CASC19-249ENST00000641681 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
CASC19-249ENST00000641681 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
CASC19-249ENST00000641681 HAX1O00165 279 aa13.08□□□□□ -0.32
CASC19-249ENST00000641681 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
CASC19-249ENST00000641681 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
CASC19-249ENST00000641681 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
CASC19-249ENST00000641681 EVX2Q03828 476 aa12.98□□□□□ -0.33
CASC19-249ENST00000641681 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
CASC19-249ENST00000641681 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
CASC19-249ENST00000641681 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
CASC19-249ENST00000641681 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
CASC19-249ENST00000641681 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
CASC19-249ENST00000641681 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
CASC19-249ENST00000641681 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
CASC19-249ENST00000641681 GABBR2O75899 941 aa12.68□□□□□ -0.38
CASC19-249ENST00000641681 PROM2Q8N271 834 aa12.67□□□□□ -0.38
CASC19-249ENST00000641681 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
CASC19-249ENST00000641681 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
CASC19-249ENST00000641681 CLCN6P51797 869 aa12.57□□□□□ -0.4
CASC19-249ENST00000641681 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
CASC19-249ENST00000641681 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
CASC19-249ENST00000641681 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
CASC19-249ENST00000641681 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
CASC19-249ENST00000641681 DCAF8L2P0C7V8 631 aa12.47□□□□□ -0.41
CASC19-249ENST00000641681 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
CASC19-249ENST00000641681 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
CASC19-249ENST00000641681 ABCC9O60706 1549 aa12.43□□□□□ -0.42
CASC19-249ENST00000641681 NACADO15069 1562 aa12.4□□□□□ -0.42
CASC19-249ENST00000641681 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
CASC19-249ENST00000641681 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
CASC19-249ENST00000641681 LHX8Q68G74 356 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms