RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
CASC19-246ENST00000641625 NISCHQ9Y2I1 1504 aa15.55■□□□□ 0.08
CASC19-246ENST00000641625 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
CASC19-246ENST00000641625 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
CASC19-246ENST00000641625 ABCC9O60706 1549 aa13.59□□□□□ -0.23
CASC19-246ENST00000641625 SENP3Q9H4L4 574 aaPredicted RBP13.52□□□□□ -0.25
CASC19-246ENST00000641625 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
CASC19-246ENST00000641625 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
CASC19-246ENST00000641625 RB1CC1Q8TDY2 1594 aa13.02□□□□□ -0.33
CASC19-246ENST00000641625 NACADO15069 1562 aa13□□□□□ -0.33
CASC19-246ENST00000641625 ZCCHC6Q5VYS8 1495 aaKnown RBP12.95□□□□□ -0.34
CASC19-246ENST00000641625 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
CASC19-246ENST00000641625 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
CASC19-246ENST00000641625 PABPN1Q86U42 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
CASC19-246ENST00000641625 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
CASC19-246ENST00000641625 FOXD1Q16676 465 aa12.67□□□□□ -0.38
CASC19-246ENST00000641625 BICRAQ9NZM4 1560 aa12.63□□□□□ -0.39
CASC19-246ENST00000641625 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
CASC19-246ENST00000641625 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
CASC19-246ENST00000641625 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
CASC19-246ENST00000641625 SHROOM4Q9ULL8 1493 aa12.51□□□□□ -0.41
CASC19-246ENST00000641625 EIF4G1Q04637 1599 aaKnown RBP12.32□□□□□ -0.44
CASC19-246ENST00000641625 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
CASC19-246ENST00000641625 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
CASC19-246ENST00000641625 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
CASC19-246ENST00000641625 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
CASC19-246ENST00000641625 MSH5O43196 834 aa12.03□□□□□ -0.48
CASC19-246ENST00000641625 NCAPD3P42695 1498 aa12.02□□□□□ -0.49
CASC19-246ENST00000641625 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.49
CASC19-246ENST00000641625 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
CASC19-246ENST00000641625 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
CASC19-246ENST00000641625 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
CASC19-246ENST00000641625 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
CASC19-246ENST00000641625 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
CASC19-246ENST00000641625 RSF1Q96T23 1441 aaPredicted RBP11.85□□□□□ -0.51
CASC19-246ENST00000641625 WIZO95785 1651 aa11.83□□□□□ -0.52
CASC19-246ENST00000641625 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
CASC19-246ENST00000641625 NESP48681 1621 aa11.74□□□□□ -0.53
CASC19-246ENST00000641625 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
CASC19-246ENST00000641625 TOP2AP11388 1531 aaKnown RBP11.72□□□□□ -0.53
CASC19-246ENST00000641625 LAMC3Q9Y6N6 1575 aa11.69□□□□□ -0.54
CASC19-246ENST00000641625 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
CASC19-246ENST00000641625 PDS5BQ9NTI5 1447 aa11.63□□□□□ -0.55
CASC19-246ENST00000641625 CFTRP13569 1480 aa11.6□□□□□ -0.55
CASC19-246ENST00000641625 CUX2O14529 1486 aa11.59□□□□□ -0.55
CASC19-246ENST00000641625 CCDC88BA6NC98 1476 aa11.58□□□□□ -0.56
CASC19-246ENST00000641625 KIF21AQ7Z4S6 1674 aa11.56□□□□□ -0.56
CASC19-246ENST00000641625 THOC2Q8NI27 1593 aaKnown RBP11.55□□□□□ -0.56
CASC19-246ENST00000641625 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
CASC19-246ENST00000641625 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
CASC19-246ENST00000641625 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
CASC19-246ENST00000641625 CEP164Q9UPV0 1460 aa11.52□□□□□ -0.56
CASC19-246ENST00000641625 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.57
CASC19-246ENST00000641625 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
CASC19-246ENST00000641625 WDR62O43379 1518 aa11.47□□□□□ -0.57
CASC19-246ENST00000641625 ADRA2BP18089 450 aa11.44□□□□□ -0.58
CASC19-246ENST00000641625 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
CASC19-246ENST00000641625 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
CASC19-246ENST00000641625 TOPBP1Q92547 1522 aa11.34□□□□□ -0.59
CASC19-246ENST00000641625 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
CASC19-246ENST00000641625 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
CASC19-246ENST00000641625 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
CASC19-246ENST00000641625 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
CASC19-246ENST00000641625 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
CASC19-246ENST00000641625 CUX1P39880 1505 aa11.24□□□□□ -0.61
CASC19-246ENST00000641625 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
CASC19-246ENST00000641625 FGD5Q6ZNL6 1462 aa11.22□□□□□ -0.61
CASC19-246ENST00000641625 SOGA1O94964 1423 aa11.2□□□□□ -0.62
CASC19-246ENST00000641625 TARBP1Q13395 1621 aaKnown RBP11.2□□□□□ -0.62
CASC19-246ENST00000641625 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
CASC19-246ENST00000641625 EIF4G3O43432 1585 aaKnown RBP11.18□□□□□ -0.62
CASC19-246ENST00000641625 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.62
CASC19-246ENST00000641625 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CASC19-246ENST00000641625 TDRD9Q8NDG6 1382 aaKnown RBP11.15□□□□□ -0.62
CASC19-246ENST00000641625 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
CASC19-246ENST00000641625 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
CASC19-246ENST00000641625 OSCARQ8IYS5 282 aa11.12□□□□□ -0.63
CASC19-246ENST00000641625 WDR97A6NE52 1622 aa11.1□□□□□ -0.63
CASC19-246ENST00000641625 BIVM-ERCC5R4GMW8 1640 aa11.1□□□□□ -0.63
CASC19-246ENST00000641625 ABCA10Q8WWZ4 1543 aa11.1□□□□□ -0.63
CASC19-246ENST00000641625 GRIN2BQ13224 1484 aa11.08□□□□□ -0.64
CASC19-246ENST00000641625 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
CASC19-246ENST00000641625 SNAPC4Q5SXM2 1469 aa11.07□□□□□ -0.64
CASC19-246ENST00000641625 FBLN2P98095 1184 aa11.06□□□□□ -0.64
CASC19-246ENST00000641625 MAGI1Q96QZ7 1491 aaPredicted RBP11.05□□□□□ -0.64
CASC19-246ENST00000641625 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
CASC19-246ENST00000641625 CHMP7Q8WUX9 453 aaPredicted RBP11.02□□□□□ -0.64
CASC19-246ENST00000641625 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
CASC19-246ENST00000641625 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
CASC19-246ENST00000641625 CHD1O14646 1710 aa11.01□□□□□ -0.65
CASC19-246ENST00000641625 PBRM1Q86U86 1689 aa11□□□□□ -0.65
CASC19-246ENST00000641625 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.65
CASC19-246ENST00000641625 FHAD1B1AJZ9 1412 aa10.94□□□□□ -0.66
CASC19-246ENST00000641625 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
CASC19-246ENST00000641625 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
CASC19-246ENST00000641625 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
CASC19-246ENST00000641625 GRIN2AQ12879 1464 aa10.93□□□□□ -0.66
CASC19-246ENST00000641625 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
CASC19-246ENST00000641625 TRIM41Q8WV44 630 aa10.92□□□□□ -0.66
CASC19-246ENST00000641625 RIMBP3CA6NJZ7 1639 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms