RNA–Protein interactions for RNA: ENST00000642010.1

CASC19-273, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 925 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-273ENST00000642010 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
CASC19-273ENST00000642010 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
CASC19-273ENST00000642010 ABCC9O60706 1549 aa18.27■□□□□ 0.51
CASC19-273ENST00000642010 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
CASC19-273ENST00000642010 NACADO15069 1562 aa17.88■□□□□ 0.45
CASC19-273ENST00000642010 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
CASC19-273ENST00000642010 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
CASC19-273ENST00000642010 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
CASC19-273ENST00000642010 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CASC19-273ENST00000642010 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
CASC19-273ENST00000642010 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
CASC19-273ENST00000642010 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.35
CASC19-273ENST00000642010 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
CASC19-273ENST00000642010 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
CASC19-273ENST00000642010 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
CASC19-273ENST00000642010 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
CASC19-273ENST00000642010 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
CASC19-273ENST00000642010 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
CASC19-273ENST00000642010 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
CASC19-273ENST00000642010 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
CASC19-273ENST00000642010 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
CASC19-273ENST00000642010 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
CASC19-273ENST00000642010 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
CASC19-273ENST00000642010 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
CASC19-273ENST00000642010 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
CASC19-273ENST00000642010 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
CASC19-273ENST00000642010 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
CASC19-273ENST00000642010 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
CASC19-273ENST00000642010 WIZO95785 1651 aa16.23■□□□□ 0.19
CASC19-273ENST00000642010 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
CASC19-273ENST00000642010 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
CASC19-273ENST00000642010 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
CASC19-273ENST00000642010 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
CASC19-273ENST00000642010 CFTRP13569 1480 aa15.88■□□□□ 0.13
CASC19-273ENST00000642010 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
CASC19-273ENST00000642010 NESP48681 1621 aa15.84■□□□□ 0.13
CASC19-273ENST00000642010 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
CASC19-273ENST00000642010 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
CASC19-273ENST00000642010 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
CASC19-273ENST00000642010 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
CASC19-273ENST00000642010 CUX2O14529 1486 aa15.75■□□□□ 0.11
CASC19-273ENST00000642010 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.1
CASC19-273ENST00000642010 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
CASC19-273ENST00000642010 WDR62O43379 1518 aa15.69■□□□□ 0.1
CASC19-273ENST00000642010 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
CASC19-273ENST00000642010 ABCC8Q09428 1581 aa15.59■□□□□ 0.09
CASC19-273ENST00000642010 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
CASC19-273ENST00000642010 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
CASC19-273ENST00000642010 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
CASC19-273ENST00000642010 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
CASC19-273ENST00000642010 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
CASC19-273ENST00000642010 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
CASC19-273ENST00000642010 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
CASC19-273ENST00000642010 CUX1P39880 1505 aa15.39■□□□□ 0.05
CASC19-273ENST00000642010 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
CASC19-273ENST00000642010 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
CASC19-273ENST00000642010 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
CASC19-273ENST00000642010 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
CASC19-273ENST00000642010 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
CASC19-273ENST00000642010 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
CASC19-273ENST00000642010 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
CASC19-273ENST00000642010 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
CASC19-273ENST00000642010 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
CASC19-273ENST00000642010 SOGA1O94964 1423 aa15.22■□□□□ 0.03
CASC19-273ENST00000642010 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
CASC19-273ENST00000642010 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
CASC19-273ENST00000642010 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
CASC19-273ENST00000642010 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
CASC19-273ENST00000642010 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
CASC19-273ENST00000642010 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
CASC19-273ENST00000642010 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
CASC19-273ENST00000642010 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
CASC19-273ENST00000642010 AQRO60306 1485 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■■■■□ 24.7
CASC19-273ENST00000642010 CHD1O14646 1710 aa15.07■□□□□ 0
CASC19-273ENST00000642010 ADAMTS12P58397 1594 aa15.05■□□□□ -0
CASC19-273ENST00000642010 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
CASC19-273ENST00000642010 SYNJ2O15056 1496 aa15.02■□□□□ -0
CASC19-273ENST00000642010 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
CASC19-273ENST00000642010 CUL7Q14999 1698 aa15.02□□□□□ -0.01
CASC19-273ENST00000642010 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
CASC19-273ENST00000642010 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
CASC19-273ENST00000642010 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
CASC19-273ENST00000642010 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
CASC19-273ENST00000642010 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
CASC19-273ENST00000642010 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
CASC19-273ENST00000642010 NUP160Q12769 1436 aa14.9□□□□□ -0.02
CASC19-273ENST00000642010 EEA1Q15075 1411 aa14.87□□□□□ -0.03
CASC19-273ENST00000642010 IGF1RP08069 1367 aa14.86□□□□□ -0.03
CASC19-273ENST00000642010 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
CASC19-273ENST00000642010 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
CASC19-273ENST00000642010 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
CASC19-273ENST00000642010 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
CASC19-273ENST00000642010 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
CASC19-273ENST00000642010 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 PRXQ9BXM0 1461 aa14.77□□□□□ -0.04
CASC19-273ENST00000642010 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
CASC19-273ENST00000642010 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms