RNA–Protein interactions for RNA: ENST00000642010.1

CASC19-273, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 925 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-273ENST00000642010 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
CASC19-273ENST00000642010 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
CASC19-273ENST00000642010 ABCC9O60706 1549 aa18.27■□□□□ 0.51
CASC19-273ENST00000642010 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
CASC19-273ENST00000642010 NACADO15069 1562 aa17.88■□□□□ 0.45
CASC19-273ENST00000642010 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
CASC19-273ENST00000642010 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
CASC19-273ENST00000642010 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
CASC19-273ENST00000642010 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CASC19-273ENST00000642010 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
CASC19-273ENST00000642010 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
CASC19-273ENST00000642010 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.35
CASC19-273ENST00000642010 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
CASC19-273ENST00000642010 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
CASC19-273ENST00000642010 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
CASC19-273ENST00000642010 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
CASC19-273ENST00000642010 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
CASC19-273ENST00000642010 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
CASC19-273ENST00000642010 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
CASC19-273ENST00000642010 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
CASC19-273ENST00000642010 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
CASC19-273ENST00000642010 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
CASC19-273ENST00000642010 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
CASC19-273ENST00000642010 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
CASC19-273ENST00000642010 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
CASC19-273ENST00000642010 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
CASC19-273ENST00000642010 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
CASC19-273ENST00000642010 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
CASC19-273ENST00000642010 WIZO95785 1651 aa16.23■□□□□ 0.19
CASC19-273ENST00000642010 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
CASC19-273ENST00000642010 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
CASC19-273ENST00000642010 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
CASC19-273ENST00000642010 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
CASC19-273ENST00000642010 CFTRP13569 1480 aa15.88■□□□□ 0.13
CASC19-273ENST00000642010 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
CASC19-273ENST00000642010 NESP48681 1621 aa15.84■□□□□ 0.13
CASC19-273ENST00000642010 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
CASC19-273ENST00000642010 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
CASC19-273ENST00000642010 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
CASC19-273ENST00000642010 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
CASC19-273ENST00000642010 CUX2O14529 1486 aa15.75■□□□□ 0.11
CASC19-273ENST00000642010 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.1
CASC19-273ENST00000642010 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
CASC19-273ENST00000642010 WDR62O43379 1518 aa15.69■□□□□ 0.1
CASC19-273ENST00000642010 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
CASC19-273ENST00000642010 ABCC8Q09428 1581 aa15.59■□□□□ 0.09
CASC19-273ENST00000642010 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
CASC19-273ENST00000642010 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
CASC19-273ENST00000642010 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
CASC19-273ENST00000642010 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
CASC19-273ENST00000642010 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
CASC19-273ENST00000642010 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
CASC19-273ENST00000642010 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
CASC19-273ENST00000642010 CUX1P39880 1505 aa15.39■□□□□ 0.05
CASC19-273ENST00000642010 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
CASC19-273ENST00000642010 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
CASC19-273ENST00000642010 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
CASC19-273ENST00000642010 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
CASC19-273ENST00000642010 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
CASC19-273ENST00000642010 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
CASC19-273ENST00000642010 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
CASC19-273ENST00000642010 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
CASC19-273ENST00000642010 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
CASC19-273ENST00000642010 SOGA1O94964 1423 aa15.22■□□□□ 0.03
CASC19-273ENST00000642010 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
CASC19-273ENST00000642010 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
CASC19-273ENST00000642010 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
CASC19-273ENST00000642010 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
CASC19-273ENST00000642010 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
CASC19-273ENST00000642010 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
CASC19-273ENST00000642010 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
CASC19-273ENST00000642010 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
CASC19-273ENST00000642010 AQRO60306 1485 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■■■■□ 24.7
CASC19-273ENST00000642010 CHD1O14646 1710 aa15.07■□□□□ 0
CASC19-273ENST00000642010 ADAMTS12P58397 1594 aa15.05■□□□□ -0
CASC19-273ENST00000642010 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
CASC19-273ENST00000642010 SYNJ2O15056 1496 aa15.02■□□□□ -0
CASC19-273ENST00000642010 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
CASC19-273ENST00000642010 CUL7Q14999 1698 aa15.02□□□□□ -0.01
CASC19-273ENST00000642010 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
CASC19-273ENST00000642010 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
CASC19-273ENST00000642010 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
CASC19-273ENST00000642010 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
CASC19-273ENST00000642010 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
CASC19-273ENST00000642010 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
CASC19-273ENST00000642010 NUP160Q12769 1436 aa14.9□□□□□ -0.02
CASC19-273ENST00000642010 EEA1Q15075 1411 aa14.87□□□□□ -0.03
CASC19-273ENST00000642010 IGF1RP08069 1367 aa14.86□□□□□ -0.03
CASC19-273ENST00000642010 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
CASC19-273ENST00000642010 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
CASC19-273ENST00000642010 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
CASC19-273ENST00000642010 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
CASC19-273ENST00000642010 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
CASC19-273ENST00000642010 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
CASC19-273ENST00000642010 PRXQ9BXM0 1461 aa14.77□□□□□ -0.04
CASC19-273ENST00000642010 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
CASC19-273ENST00000642010 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms