RNA–Protein interactions for RNA: ENST00000467747.1

SEMA4C-204, Transcript of semaphorin 4C, humanhuman

TSL 2

Gene SEMA4C, Length 3,371 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4C-204ENST00000467747 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
SEMA4C-204ENST00000467747 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
SEMA4C-204ENST00000467747 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
SEMA4C-204ENST00000467747 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
SEMA4C-204ENST00000467747 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
SEMA4C-204ENST00000467747 HRCP23327 699 aa24.35■■□□□ 1.49
SEMA4C-204ENST00000467747 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
SEMA4C-204ENST00000467747 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
SEMA4C-204ENST00000467747 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
SEMA4C-204ENST00000467747 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
SEMA4C-204ENST00000467747 LOC105371045A0A1W2PR82 267 aa24■■□□□ 1.43
SEMA4C-204ENST00000467747 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
SEMA4C-204ENST00000467747 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
SEMA4C-204ENST00000467747 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
SEMA4C-204ENST00000467747 TRIM26Q12899 539 aaPredicted RBP23.42■■□□□ 1.34
SEMA4C-204ENST00000467747 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
SEMA4C-204ENST00000467747 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
SEMA4C-204ENST00000467747 ABCC9O60706 1549 aa22.99■■□□□ 1.27
SEMA4C-204ENST00000467747 SCAF1Q9H7N4 1312 aaKnown RBP22.92■■□□□ 1.26
SEMA4C-204ENST00000467747 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
SEMA4C-204ENST00000467747 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
SEMA4C-204ENST00000467747 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
SEMA4C-204ENST00000467747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
SEMA4C-204ENST00000467747 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
SEMA4C-204ENST00000467747 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
SEMA4C-204ENST00000467747 CCER1Q8TC90 406 aaPredicted RBP22.66■■□□□ 1.22
SEMA4C-204ENST00000467747 PELP1Q8IZL8 1130 aaKnown RBP22.53■■□□□ 1.2
SEMA4C-204ENST00000467747 NEUROD1Q13562 356 aa22.51■■□□□ 1.19
SEMA4C-204ENST00000467747 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.19
SEMA4C-204ENST00000467747 ACIN1Q9UKV3 1341 aaKnown RBP22.4■■□□□ 1.18
SEMA4C-204ENST00000467747 DIEXFQ68CQ4 756 aaKnown RBP22.38■■□□□ 1.17
SEMA4C-204ENST00000467747 GTF3C3Q9Y5Q9 886 aa22.37■■□□□ 1.17
SEMA4C-204ENST00000467747 YTHDC1Q96MU7 727 aaKnown RBP22.29■■□□□ 1.16
SEMA4C-204ENST00000467747 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
SEMA4C-204ENST00000467747 NACADO15069 1562 aa22.21■■□□□ 1.15
SEMA4C-204ENST00000467747 WIZO95785 1651 aa22.2■■□□□ 1.14
SEMA4C-204ENST00000467747 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
SEMA4C-204ENST00000467747 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
SEMA4C-204ENST00000467747 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
SEMA4C-204ENST00000467747 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
SEMA4C-204ENST00000467747 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
SEMA4C-204ENST00000467747 CCDC88BA6NC98 1476 aa22.01■■□□□ 1.11
SEMA4C-204ENST00000467747 SOGA1O94964 1423 aa21.98■■□□□ 1.11
SEMA4C-204ENST00000467747 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
SEMA4C-204ENST00000467747 ZNF316A6NFI3 1004 aaPredicted RBP21.95■■□□□ 1.1
SEMA4C-204ENST00000467747 MIER1Q8N108 512 aa21.9■■□□□ 1.1
SEMA4C-204ENST00000467747 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
SEMA4C-204ENST00000467747 RUSC2Q8N2Y8 1516 aa21.88■■□□□ 1.09
SEMA4C-204ENST00000467747 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
SEMA4C-204ENST00000467747 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
SEMA4C-204ENST00000467747 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
SEMA4C-204ENST00000467747 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
SEMA4C-204ENST00000467747 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
SEMA4C-204ENST00000467747 APLP2Q06481 763 aa21.64■■□□□ 1.05
SEMA4C-204ENST00000467747 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.05
SEMA4C-204ENST00000467747 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
SEMA4C-204ENST00000467747 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
SEMA4C-204ENST00000467747 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
SEMA4C-204ENST00000467747 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
SEMA4C-204ENST00000467747 CLIP1P30622 1438 aa21.48■■□□□ 1.03
SEMA4C-204ENST00000467747 ITGAEP38570 1179 aa21.44■■□□□ 1.02
SEMA4C-204ENST00000467747 EEA1Q15075 1411 aa21.41■■□□□ 1.02
SEMA4C-204ENST00000467747 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
SEMA4C-204ENST00000467747 MYT1Q01538 1121 aa21.38■■□□□ 1.01
SEMA4C-204ENST00000467747 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
SEMA4C-204ENST00000467747 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
SEMA4C-204ENST00000467747 VPS8Q8N3P4 1428 aa21.3■■□□□ 1
SEMA4C-204ENST00000467747 KANK4Q5T7N3 995 aaPredicted RBP21.29■■□□□ 1
SEMA4C-204ENST00000467747 SUPT16HQ9Y5B9 1047 aaKnown RBP21.28■■□□□ 1
SEMA4C-204ENST00000467747 SYNJ1O43426 1573 aa21.28■■□□□ 1
SEMA4C-204ENST00000467747 KCNH8Q96L42 1107 aa21.26■□□□□ 0.99
SEMA4C-204ENST00000467747 BCANQ96GW7 911 aa21.26■□□□□ 0.99
SEMA4C-204ENST00000467747 DHX57Q6P158 1386 aaKnown RBP21.19■□□□□ 0.98
SEMA4C-204ENST00000467747 KIF21BO75037 1637 aa21.14■□□□□ 0.97
SEMA4C-204ENST00000467747 HIRIP3Q9BW71 556 aaPredicted RBP21.09■□□□□ 0.97
SEMA4C-204ENST00000467747 TSHZ2Q9NRE2 1034 aa21.06■□□□□ 0.96
SEMA4C-204ENST00000467747 DDX10Q13206 875 aaKnown RBP21.02■□□□□ 0.96
SEMA4C-204ENST00000467747 ATP1B4Q9UN42 357 aaPredicted RBP21.01■□□□□ 0.95
SEMA4C-204ENST00000467747 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
SEMA4C-204ENST00000467747 SIN3AQ96ST3 1273 aa20.97■□□□□ 0.95
SEMA4C-204ENST00000467747 FKBP8Q14318 412 aa20.97■□□□□ 0.95
SEMA4C-204ENST00000467747 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
SEMA4C-204ENST00000467747 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
SEMA4C-204ENST00000467747 CLSPNQ9HAW4 1339 aa20.93■□□□□ 0.94
SEMA4C-204ENST00000467747 FAM50AQ14320 339 aaKnown RBP20.92■□□□□ 0.94
SEMA4C-204ENST00000467747 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
SEMA4C-204ENST00000467747 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
SEMA4C-204ENST00000467747 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
SEMA4C-204ENST00000467747 RAB3GAP2Q9H2M9 1393 aa20.85■□□□□ 0.93
SEMA4C-204ENST00000467747 ANP32EQ9BTT0 268 aa20.81■□□□□ 0.92
SEMA4C-204ENST00000467747 PRXQ9BXM0 1461 aa20.79■□□□□ 0.92
SEMA4C-204ENST00000467747 RRBP1Q9P2E9 1410 aaKnown RBP20.77■□□□□ 0.92
SEMA4C-204ENST00000467747 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
SEMA4C-204ENST00000467747 PEG3Q9GZU2 1588 aa20.75■□□□□ 0.91
SEMA4C-204ENST00000467747 NEFLP07196 543 aa20.72■□□□□ 0.91
SEMA4C-204ENST00000467747 ARHGAP35Q9NRY4 1499 aa20.72■□□□□ 0.91
SEMA4C-204ENST00000467747 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
SEMA4C-204ENST00000467747 IRX6P78412 446 aaPredicted RBP20.7■□□□□ 0.9
SEMA4C-204ENST00000467747 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
SEMA4C-204ENST00000467747 MAPKBP1O60336 1514 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms