RNA–Protein interactions for RNA: ENST00000641719.1

CASC19-254, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-254ENST00000641719 AEBP2Q6ZN18 517 aaPredicted RBP35.3■■■■□ 3.24
CASC19-254ENST00000641719 CHIC1Q5VXU3 224 aa33.77■■■■□ 3
CASC19-254ENST00000641719 SENP3Q9H4L4 574 aaPredicted RBP30.29■■■□□ 2.44
CASC19-254ENST00000641719 PHF23Q9BUL5 403 aaPredicted RBP29.79■■■□□ 2.36
CASC19-254ENST00000641719 FOXD1Q16676 465 aa28.06■■■□□ 2.08
CASC19-254ENST00000641719 PLPPR3Q6T4P5 718 aa27.08■■□□□ 1.93
CASC19-254ENST00000641719 MSH5O43196 834 aa26.39■■□□□ 1.82
CASC19-254ENST00000641719 PIAS4Q8N2W9 510 aaPredicted RBP26.27■■□□□ 1.8
CASC19-254ENST00000641719 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
CASC19-254ENST00000641719 ADRA2BP18089 450 aa26.17■■□□□ 1.78
CASC19-254ENST00000641719 POTEDQ86YR6 584 aa25.4■■□□□ 1.66
CASC19-254ENST00000641719 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
CASC19-254ENST00000641719 DMRT2Q9Y5R5 561 aa24.01■■□□□ 1.43
CASC19-254ENST00000641719 MAPK8IP2Q13387 824 aaPredicted RBP23.96■■□□□ 1.43
CASC19-254ENST00000641719 PPP4R3CPQ6ZMV5 832 aa23.67■■□□□ 1.38
CASC19-254ENST00000641719 CNKSR2Q8WXI2 1034 aa23.29■■□□□ 1.32
CASC19-254ENST00000641719 HOXD11P31277 338 aaPredicted RBP23.2■■□□□ 1.3
CASC19-254ENST00000641719 RNF216Q9NWF9 866 aaPredicted RBP23.07■■□□□ 1.28
CASC19-254ENST00000641719 NCBP3Q53F19 620 aaKnown RBP22.91■■□□□ 1.26
CASC19-254ENST00000641719 DCAF8L1A6NGE4 600 aa22.82■■□□□ 1.24
CASC19-254ENST00000641719 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
CASC19-254ENST00000641719 RNF39Q9H2S5 420 aa22.47■■□□□ 1.19
CASC19-254ENST00000641719 NPM3O75607 178 aaKnown RBP22.44■■□□□ 1.18
CASC19-254ENST00000641719 CACNB1Q02641 598 aaPredicted RBP22.44■■□□□ 1.18
CASC19-254ENST00000641719 C1QBPQ07021 282 aaKnown RBP22.23■■□□□ 1.15
CASC19-254ENST00000641719 KCNA4P22459 653 aa22.05■■□□□ 1.12
CASC19-254ENST00000641719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22■■□□□ 1.11
CASC19-254ENST00000641719 U3KPZ7 1027 aaPredicted RBP21.55■■□□□ 1.04
CASC19-254ENST00000641719 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
CASC19-254ENST00000641719 APLP2Q06481 763 aa21.2■□□□□ 0.98
CASC19-254ENST00000641719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
CASC19-254ENST00000641719 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
CASC19-254ENST00000641719 CAPN15O75808 1086 aa21.12■□□□□ 0.97
CASC19-254ENST00000641719 SPINK5Q9NQ38 1064 aaPredicted RBP21.12■□□□□ 0.97
CASC19-254ENST00000641719 DSG3P32926 999 aa21.04■□□□□ 0.96
CASC19-254ENST00000641719 SAMD1Q6SPF0 538 aaPredicted RBP21.01■□□□□ 0.95
CASC19-254ENST00000641719 ZNF219Q9P2Y4 722 aaPredicted RBP20.94■□□□□ 0.94
CASC19-254ENST00000641719 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
CASC19-254ENST00000641719 MYCNP04198 464 aaPredicted RBP20.86■□□□□ 0.93
CASC19-254ENST00000641719 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
CASC19-254ENST00000641719 FOXD4L1Q9NU39 408 aa20.67■□□□□ 0.9
CASC19-254ENST00000641719 ABCB7O75027 752 aa20.55■□□□□ 0.88
CASC19-254ENST00000641719 POLA2Q14181 598 aa20.3■□□□□ 0.84
CASC19-254ENST00000641719 ZBTB22O15209 634 aa20.23■□□□□ 0.83
CASC19-254ENST00000641719 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
CASC19-254ENST00000641719 ATXN8OSP0DMR3 200 aa20.16■□□□□ 0.82
CASC19-254ENST00000641719 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
CASC19-254ENST00000641719 ZBTB12Q9Y330 459 aaPredicted RBP20.1■□□□□ 0.81
CASC19-254ENST00000641719 POTEHQ6S545 545 aa19.95■□□□□ 0.78
CASC19-254ENST00000641719 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
CASC19-254ENST00000641719 AKT1S1Q96B36 256 aa19.74■□□□□ 0.75
CASC19-254ENST00000641719 OSCARQ8IYS5 282 aa19.6■□□□□ 0.73
CASC19-254ENST00000641719 CHRDL2Q6WN34 429 aa19.59■□□□□ 0.73
CASC19-254ENST00000641719 FBLN2P98095 1184 aa19.56■□□□□ 0.72
CASC19-254ENST00000641719 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
CASC19-254ENST00000641719 REM2Q8IYK8 340 aaPredicted RBP19.44■□□□□ 0.7
CASC19-254ENST00000641719 SPDYE2BA6NHP3 402 aa19.43■□□□□ 0.7
CASC19-254ENST00000641719 SPDYE6P0CI01 402 aa19.43■□□□□ 0.7
CASC19-254ENST00000641719 SPDYE2Q495Y8 402 aa19.43■□□□□ 0.7
CASC19-254ENST00000641719 MKRN4PQ13434 485 aaPredicted RBP19.3■□□□□ 0.68
CASC19-254ENST00000641719 PITPNM1O00562 1244 aa19.19■□□□□ 0.66
CASC19-254ENST00000641719 SSUH2Q9Y2M2 353 aa19.15■□□□□ 0.66
CASC19-254ENST00000641719 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
CASC19-254ENST00000641719 PIP4P2Q8N4L2 257 aa19.11■□□□□ 0.65
CASC19-254ENST00000641719 ZNF692Q9BU19 519 aaPredicted RBP19.11■□□□□ 0.65
CASC19-254ENST00000641719 FXR2P51116 673 aaKnown RBP eCLIP19.1■□□□□ 0.65
CASC19-254ENST00000641719 SPDYE1Q8NFV5 336 aaPredicted RBP19.04■□□□□ 0.64
CASC19-254ENST00000641719 CLEC11AQ9Y240 323 aa18.84■□□□□ 0.61
CASC19-254ENST00000641719 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
CASC19-254ENST00000641719 SP7Q8TDD2 431 aaPredicted RBP18.79■□□□□ 0.6
CASC19-254ENST00000641719 HAX1O00165 279 aa18.72■□□□□ 0.59
CASC19-254ENST00000641719 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
CASC19-254ENST00000641719 PRR29P0C7W0 189 aa18.65■□□□□ 0.58
CASC19-254ENST00000641719 SPDYE4A6NLX3 237 aa18.5■□□□□ 0.55
CASC19-254ENST00000641719 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
CASC19-254ENST00000641719 C19orf67A6NJJ6 358 aa18.48■□□□□ 0.55
CASC19-254ENST00000641719 CHADLQ6NUI6 762 aa18.41■□□□□ 0.54
CASC19-254ENST00000641719 EVX2Q03828 476 aa18.4■□□□□ 0.54
CASC19-254ENST00000641719 FARP1Q9Y4F1 1045 aaPredicted RBP18.31■□□□□ 0.52
CASC19-254ENST00000641719 CLCN6P51797 869 aa18.18■□□□□ 0.5
CASC19-254ENST00000641719 PROM2Q8N271 834 aa18.18■□□□□ 0.5
CASC19-254ENST00000641719 CREBZFQ9NS37 354 aa18.17■□□□□ 0.5
CASC19-254ENST00000641719 CD44P16070 742 aaKnown RBP18.14■□□□□ 0.49
CASC19-254ENST00000641719 GABBR2O75899 941 aa18.11■□□□□ 0.49
CASC19-254ENST00000641719 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
CASC19-254ENST00000641719 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
CASC19-254ENST00000641719 MNX1P50219 401 aaPredicted RBP17.89■□□□□ 0.46
CASC19-254ENST00000641719 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
CASC19-254ENST00000641719 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
CASC19-254ENST00000641719 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
CASC19-254ENST00000641719 DCBLD2Q96PD2 775 aa17.68■□□□□ 0.42
CASC19-254ENST00000641719 POTEIP0CG38 1075 aa17.67■□□□□ 0.42
CASC19-254ENST00000641719 FKBP8Q14318 412 aa17.62■□□□□ 0.41
CASC19-254ENST00000641719 MIER1Q8N108 512 aa17.61■□□□□ 0.41
CASC19-254ENST00000641719 LHX8Q68G74 356 aa17.6■□□□□ 0.41
CASC19-254ENST00000641719 GALR2O43603 387 aaPredicted RBP17.58■□□□□ 0.41
CASC19-254ENST00000641719 PHF12Q96QT6 1004 aa17.57■□□□□ 0.4
CASC19-254ENST00000641719 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
CASC19-254ENST00000641719 PLCD3Q8N3E9 789 aa17.49■□□□□ 0.39
CASC19-254ENST00000641719 CCDC61Q9Y6R9 512 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms