RNA–Protein interactions for RNA: ENST00000641719.1

CASC19-254, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,443 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-254ENST00000641719 AEBP2Q6ZN18 517 aaPredicted RBP35.3■■■■□ 3.24
CASC19-254ENST00000641719 CHIC1Q5VXU3 224 aa33.77■■■■□ 3
CASC19-254ENST00000641719 SENP3Q9H4L4 574 aaPredicted RBP30.29■■■□□ 2.44
CASC19-254ENST00000641719 PHF23Q9BUL5 403 aaPredicted RBP29.79■■■□□ 2.36
CASC19-254ENST00000641719 FOXD1Q16676 465 aa28.06■■■□□ 2.08
CASC19-254ENST00000641719 PLPPR3Q6T4P5 718 aa27.08■■□□□ 1.93
CASC19-254ENST00000641719 MSH5O43196 834 aa26.39■■□□□ 1.82
CASC19-254ENST00000641719 PIAS4Q8N2W9 510 aaPredicted RBP26.27■■□□□ 1.8
CASC19-254ENST00000641719 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
CASC19-254ENST00000641719 ADRA2BP18089 450 aa26.17■■□□□ 1.78
CASC19-254ENST00000641719 POTEDQ86YR6 584 aa25.4■■□□□ 1.66
CASC19-254ENST00000641719 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
CASC19-254ENST00000641719 DMRT2Q9Y5R5 561 aa24.01■■□□□ 1.43
CASC19-254ENST00000641719 MAPK8IP2Q13387 824 aaPredicted RBP23.96■■□□□ 1.43
CASC19-254ENST00000641719 PPP4R3CPQ6ZMV5 832 aa23.67■■□□□ 1.38
CASC19-254ENST00000641719 CNKSR2Q8WXI2 1034 aa23.29■■□□□ 1.32
CASC19-254ENST00000641719 HOXD11P31277 338 aaPredicted RBP23.2■■□□□ 1.3
CASC19-254ENST00000641719 RNF216Q9NWF9 866 aaPredicted RBP23.07■■□□□ 1.28
CASC19-254ENST00000641719 NCBP3Q53F19 620 aaKnown RBP22.91■■□□□ 1.26
CASC19-254ENST00000641719 DCAF8L1A6NGE4 600 aa22.82■■□□□ 1.24
CASC19-254ENST00000641719 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
CASC19-254ENST00000641719 RNF39Q9H2S5 420 aa22.47■■□□□ 1.19
CASC19-254ENST00000641719 NPM3O75607 178 aaKnown RBP22.44■■□□□ 1.18
CASC19-254ENST00000641719 CACNB1Q02641 598 aaPredicted RBP22.44■■□□□ 1.18
CASC19-254ENST00000641719 C1QBPQ07021 282 aaKnown RBP22.23■■□□□ 1.15
CASC19-254ENST00000641719 KCNA4P22459 653 aa22.05■■□□□ 1.12
CASC19-254ENST00000641719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22■■□□□ 1.11
CASC19-254ENST00000641719 U3KPZ7 1027 aaPredicted RBP21.55■■□□□ 1.04
CASC19-254ENST00000641719 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
CASC19-254ENST00000641719 APLP2Q06481 763 aa21.2■□□□□ 0.98
CASC19-254ENST00000641719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
CASC19-254ENST00000641719 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
CASC19-254ENST00000641719 CAPN15O75808 1086 aa21.12■□□□□ 0.97
CASC19-254ENST00000641719 SPINK5Q9NQ38 1064 aaPredicted RBP21.12■□□□□ 0.97
CASC19-254ENST00000641719 DSG3P32926 999 aa21.04■□□□□ 0.96
CASC19-254ENST00000641719 SAMD1Q6SPF0 538 aaPredicted RBP21.01■□□□□ 0.95
CASC19-254ENST00000641719 ZNF219Q9P2Y4 722 aaPredicted RBP20.94■□□□□ 0.94
CASC19-254ENST00000641719 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
CASC19-254ENST00000641719 MYCNP04198 464 aaPredicted RBP20.86■□□□□ 0.93
CASC19-254ENST00000641719 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
CASC19-254ENST00000641719 FOXD4L1Q9NU39 408 aa20.67■□□□□ 0.9
CASC19-254ENST00000641719 ABCB7O75027 752 aa20.55■□□□□ 0.88
CASC19-254ENST00000641719 POLA2Q14181 598 aa20.3■□□□□ 0.84
CASC19-254ENST00000641719 ZBTB22O15209 634 aa20.23■□□□□ 0.83
CASC19-254ENST00000641719 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
CASC19-254ENST00000641719 ATXN8OSP0DMR3 200 aa20.16■□□□□ 0.82
CASC19-254ENST00000641719 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
CASC19-254ENST00000641719 ZBTB12Q9Y330 459 aaPredicted RBP20.1■□□□□ 0.81
CASC19-254ENST00000641719 POTEHQ6S545 545 aa19.95■□□□□ 0.78
CASC19-254ENST00000641719 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
CASC19-254ENST00000641719 AKT1S1Q96B36 256 aa19.74■□□□□ 0.75
CASC19-254ENST00000641719 OSCARQ8IYS5 282 aa19.6■□□□□ 0.73
CASC19-254ENST00000641719 CHRDL2Q6WN34 429 aa19.59■□□□□ 0.73
CASC19-254ENST00000641719 FBLN2P98095 1184 aa19.56■□□□□ 0.72
CASC19-254ENST00000641719 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
CASC19-254ENST00000641719 REM2Q8IYK8 340 aaPredicted RBP19.44■□□□□ 0.7
CASC19-254ENST00000641719 SPDYE2BA6NHP3 402 aa19.43■□□□□ 0.7
CASC19-254ENST00000641719 SPDYE6P0CI01 402 aa19.43■□□□□ 0.7
CASC19-254ENST00000641719 SPDYE2Q495Y8 402 aa19.43■□□□□ 0.7
CASC19-254ENST00000641719 MKRN4PQ13434 485 aaPredicted RBP19.3■□□□□ 0.68
CASC19-254ENST00000641719 PITPNM1O00562 1244 aa19.19■□□□□ 0.66
CASC19-254ENST00000641719 SSUH2Q9Y2M2 353 aa19.15■□□□□ 0.66
CASC19-254ENST00000641719 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
CASC19-254ENST00000641719 PIP4P2Q8N4L2 257 aa19.11■□□□□ 0.65
CASC19-254ENST00000641719 ZNF692Q9BU19 519 aaPredicted RBP19.11■□□□□ 0.65
CASC19-254ENST00000641719 FXR2P51116 673 aaKnown RBP eCLIP19.1■□□□□ 0.65
CASC19-254ENST00000641719 SPDYE1Q8NFV5 336 aaPredicted RBP19.04■□□□□ 0.64
CASC19-254ENST00000641719 CLEC11AQ9Y240 323 aa18.84■□□□□ 0.61
CASC19-254ENST00000641719 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
CASC19-254ENST00000641719 SP7Q8TDD2 431 aaPredicted RBP18.79■□□□□ 0.6
CASC19-254ENST00000641719 HAX1O00165 279 aa18.72■□□□□ 0.59
CASC19-254ENST00000641719 PRKAR2AP13861 404 aaKnown RBP18.71■□□□□ 0.59
CASC19-254ENST00000641719 PRR29P0C7W0 189 aa18.65■□□□□ 0.58
CASC19-254ENST00000641719 SPDYE4A6NLX3 237 aa18.5■□□□□ 0.55
CASC19-254ENST00000641719 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
CASC19-254ENST00000641719 C19orf67A6NJJ6 358 aa18.48■□□□□ 0.55
CASC19-254ENST00000641719 CHADLQ6NUI6 762 aa18.41■□□□□ 0.54
CASC19-254ENST00000641719 EVX2Q03828 476 aa18.4■□□□□ 0.54
CASC19-254ENST00000641719 FARP1Q9Y4F1 1045 aaPredicted RBP18.31■□□□□ 0.52
CASC19-254ENST00000641719 CLCN6P51797 869 aa18.18■□□□□ 0.5
CASC19-254ENST00000641719 PROM2Q8N271 834 aa18.18■□□□□ 0.5
CASC19-254ENST00000641719 CREBZFQ9NS37 354 aa18.17■□□□□ 0.5
CASC19-254ENST00000641719 CD44P16070 742 aaKnown RBP18.14■□□□□ 0.49
CASC19-254ENST00000641719 GABBR2O75899 941 aa18.11■□□□□ 0.49
CASC19-254ENST00000641719 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
CASC19-254ENST00000641719 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
CASC19-254ENST00000641719 MNX1P50219 401 aaPredicted RBP17.89■□□□□ 0.46
CASC19-254ENST00000641719 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
CASC19-254ENST00000641719 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
CASC19-254ENST00000641719 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
CASC19-254ENST00000641719 DCBLD2Q96PD2 775 aa17.68■□□□□ 0.42
CASC19-254ENST00000641719 POTEIP0CG38 1075 aa17.67■□□□□ 0.42
CASC19-254ENST00000641719 FKBP8Q14318 412 aa17.62■□□□□ 0.41
CASC19-254ENST00000641719 MIER1Q8N108 512 aa17.61■□□□□ 0.41
CASC19-254ENST00000641719 LHX8Q68G74 356 aa17.6■□□□□ 0.41
CASC19-254ENST00000641719 GALR2O43603 387 aaPredicted RBP17.58■□□□□ 0.41
CASC19-254ENST00000641719 PHF12Q96QT6 1004 aa17.57■□□□□ 0.4
CASC19-254ENST00000641719 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
CASC19-254ENST00000641719 PLCD3Q8N3E9 789 aa17.49■□□□□ 0.39
CASC19-254ENST00000641719 CCDC61Q9Y6R9 512 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms