RNA–Protein interactions for RNA: ENST00000641867.1

CASC19-262, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-262ENST00000641867 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
CASC19-262ENST00000641867 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
CASC19-262ENST00000641867 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
CASC19-262ENST00000641867 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
CASC19-262ENST00000641867 FOXD1Q16676 465 aa19.52■□□□□ 0.72
CASC19-262ENST00000641867 MSH5O43196 834 aa18.55■□□□□ 0.56
CASC19-262ENST00000641867 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
CASC19-262ENST00000641867 POTEDQ86YR6 584 aa18.35■□□□□ 0.53
CASC19-262ENST00000641867 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
CASC19-262ENST00000641867 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
CASC19-262ENST00000641867 ADRA2BP18089 450 aa17.93■□□□□ 0.46
CASC19-262ENST00000641867 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
CASC19-262ENST00000641867 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
CASC19-262ENST00000641867 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
CASC19-262ENST00000641867 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
CASC19-262ENST00000641867 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
CASC19-262ENST00000641867 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
CASC19-262ENST00000641867 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
CASC19-262ENST00000641867 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
CASC19-262ENST00000641867 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
CASC19-262ENST00000641867 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
CASC19-262ENST00000641867 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
CASC19-262ENST00000641867 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
CASC19-262ENST00000641867 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
CASC19-262ENST00000641867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
CASC19-262ENST00000641867 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
CASC19-262ENST00000641867 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
CASC19-262ENST00000641867 CAPN15O75808 1086 aa14.64□□□□□ -0.07
CASC19-262ENST00000641867 DSG3P32926 999 aa14.6□□□□□ -0.07
CASC19-262ENST00000641867 APLP2Q06481 763 aa14.59□□□□□ -0.07
CASC19-262ENST00000641867 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
CASC19-262ENST00000641867 KCNA4P22459 653 aa14.52□□□□□ -0.09
CASC19-262ENST00000641867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
CASC19-262ENST00000641867 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
CASC19-262ENST00000641867 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
CASC19-262ENST00000641867 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
CASC19-262ENST00000641867 POTEHQ6S545 545 aa14.37□□□□□ -0.11
CASC19-262ENST00000641867 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
CASC19-262ENST00000641867 TRHP20396 242 aaPredicted RBP14.32□□□□□ -0.12
CASC19-262ENST00000641867 ABCB7O75027 752 aa14.19□□□□□ -0.14
CASC19-262ENST00000641867 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
CASC19-262ENST00000641867 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
CASC19-262ENST00000641867 POLA2Q14181 598 aa13.9□□□□□ -0.18
CASC19-262ENST00000641867 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
CASC19-262ENST00000641867 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
CASC19-262ENST00000641867 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
CASC19-262ENST00000641867 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
CASC19-262ENST00000641867 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
CASC19-262ENST00000641867 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
CASC19-262ENST00000641867 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
CASC19-262ENST00000641867 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
CASC19-262ENST00000641867 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
CASC19-262ENST00000641867 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
CASC19-262ENST00000641867 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
CASC19-262ENST00000641867 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
CASC19-262ENST00000641867 ZBTB22O15209 634 aa13.28□□□□□ -0.28
CASC19-262ENST00000641867 FBLN2P98095 1184 aa13.28□□□□□ -0.28
CASC19-262ENST00000641867 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
CASC19-262ENST00000641867 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
CASC19-262ENST00000641867 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
CASC19-262ENST00000641867 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
CASC19-262ENST00000641867 HAX1O00165 279 aa13.19□□□□□ -0.3
CASC19-262ENST00000641867 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
CASC19-262ENST00000641867 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
CASC19-262ENST00000641867 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
CASC19-262ENST00000641867 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
CASC19-262ENST00000641867 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
CASC19-262ENST00000641867 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
CASC19-262ENST00000641867 EVX2Q03828 476 aa12.86□□□□□ -0.35
CASC19-262ENST00000641867 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
CASC19-262ENST00000641867 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
CASC19-262ENST00000641867 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
CASC19-262ENST00000641867 GABBR2O75899 941 aa12.68□□□□□ -0.38
CASC19-262ENST00000641867 CLCN6P51797 869 aa12.66□□□□□ -0.38
CASC19-262ENST00000641867 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
CASC19-262ENST00000641867 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
CASC19-262ENST00000641867 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
CASC19-262ENST00000641867 LHX8Q68G74 356 aa12.54□□□□□ -0.4
CASC19-262ENST00000641867 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
CASC19-262ENST00000641867 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
CASC19-262ENST00000641867 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
CASC19-262ENST00000641867 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
CASC19-262ENST00000641867 CREBZFQ9NS37 354 aa12.34□□□□□ -0.43
CASC19-262ENST00000641867 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
CASC19-262ENST00000641867 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
CASC19-262ENST00000641867 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
CASC19-262ENST00000641867 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
CASC19-262ENST00000641867 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
CASC19-262ENST00000641867 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
CASC19-262ENST00000641867 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
CASC19-262ENST00000641867 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
CASC19-262ENST00000641867 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
CASC19-262ENST00000641867 PROM2Q8N271 834 aa11.99□□□□□ -0.49
CASC19-262ENST00000641867 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
CASC19-262ENST00000641867 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
CASC19-262ENST00000641867 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
CASC19-262ENST00000641867 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
CASC19-262ENST00000641867 C7P10643 843 aa11.95□□□□□ -0.5
CASC19-262ENST00000641867 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
CASC19-262ENST00000641867 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms