RNA–Protein interactions for RNA: ENST00000641696.1

CASC19-250, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 886 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-250ENST00000641696 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
CASC19-250ENST00000641696 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
CASC19-250ENST00000641696 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
CASC19-250ENST00000641696 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
CASC19-250ENST00000641696 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
CASC19-250ENST00000641696 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
CASC19-250ENST00000641696 FOXD1Q16676 465 aa16.09■□□□□ 0.17
CASC19-250ENST00000641696 ADRA2BP18089 450 aa15.8■□□□□ 0.12
CASC19-250ENST00000641696 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
CASC19-250ENST00000641696 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
CASC19-250ENST00000641696 PIAS4Q8N2W9 510 aaPredicted RBP15.27■□□□□ 0.04
CASC19-250ENST00000641696 MSH5O43196 834 aa15.02■□□□□ -0
CASC19-250ENST00000641696 POTEDQ86YR6 584 aa15.02■□□□□ -0
CASC19-250ENST00000641696 KCNA4P22459 653 aa14.91□□□□□ -0.02
CASC19-250ENST00000641696 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
CASC19-250ENST00000641696 ABCC9O60706 1549 aa14.66□□□□□ -0.06
CASC19-250ENST00000641696 ZCCHC6Q5VYS8 1495 aaKnown RBP14.65□□□□□ -0.06
CASC19-250ENST00000641696 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
CASC19-250ENST00000641696 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
CASC19-250ENST00000641696 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
CASC19-250ENST00000641696 NACADO15069 1562 aa14.4□□□□□ -0.1
CASC19-250ENST00000641696 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
CASC19-250ENST00000641696 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
CASC19-250ENST00000641696 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
CASC19-250ENST00000641696 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
CASC19-250ENST00000641696 RB1CC1Q8TDY2 1594 aa14.32□□□□□ -0.12
CASC19-250ENST00000641696 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
CASC19-250ENST00000641696 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
CASC19-250ENST00000641696 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
CASC19-250ENST00000641696 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
CASC19-250ENST00000641696 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
CASC19-250ENST00000641696 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
CASC19-250ENST00000641696 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
CASC19-250ENST00000641696 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
CASC19-250ENST00000641696 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
CASC19-250ENST00000641696 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
CASC19-250ENST00000641696 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
CASC19-250ENST00000641696 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
CASC19-250ENST00000641696 ZBTB22O15209 634 aa13.73□□□□□ -0.21
CASC19-250ENST00000641696 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
CASC19-250ENST00000641696 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
CASC19-250ENST00000641696 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
CASC19-250ENST00000641696 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
CASC19-250ENST00000641696 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
CASC19-250ENST00000641696 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
CASC19-250ENST00000641696 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
CASC19-250ENST00000641696 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
CASC19-250ENST00000641696 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
CASC19-250ENST00000641696 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
CASC19-250ENST00000641696 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
CASC19-250ENST00000641696 WIZO95785 1651 aa13.36□□□□□ -0.27
CASC19-250ENST00000641696 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
CASC19-250ENST00000641696 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
CASC19-250ENST00000641696 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
CASC19-250ENST00000641696 SUPT5HO00267 1087 aaKnown RBP13.3□□□□□ -0.28
CASC19-250ENST00000641696 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
CASC19-250ENST00000641696 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
CASC19-250ENST00000641696 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
CASC19-250ENST00000641696 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
CASC19-250ENST00000641696 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
CASC19-250ENST00000641696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.3
CASC19-250ENST00000641696 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
CASC19-250ENST00000641696 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
CASC19-250ENST00000641696 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
CASC19-250ENST00000641696 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
CASC19-250ENST00000641696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
CASC19-250ENST00000641696 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
CASC19-250ENST00000641696 CFTRP13569 1480 aa12.89□□□□□ -0.35
CASC19-250ENST00000641696 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
CASC19-250ENST00000641696 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
CASC19-250ENST00000641696 CADPSQ9ULU8 1353 aa12.87□□□□□ -0.35
CASC19-250ENST00000641696 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
CASC19-250ENST00000641696 NESP48681 1621 aa12.8□□□□□ -0.36
CASC19-250ENST00000641696 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
CASC19-250ENST00000641696 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
CASC19-250ENST00000641696 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
CASC19-250ENST00000641696 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
CASC19-250ENST00000641696 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
CASC19-250ENST00000641696 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
CASC19-250ENST00000641696 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
CASC19-250ENST00000641696 APLP2Q06481 763 aa12.68□□□□□ -0.38
CASC19-250ENST00000641696 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
CASC19-250ENST00000641696 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
CASC19-250ENST00000641696 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
CASC19-250ENST00000641696 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
CASC19-250ENST00000641696 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
CASC19-250ENST00000641696 CUX1P39880 1505 aa12.62□□□□□ -0.39
CASC19-250ENST00000641696 DNMBPQ6XZF7 1577 aa12.62□□□□□ -0.39
CASC19-250ENST00000641696 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
CASC19-250ENST00000641696 FKBP8Q14318 412 aa12.61□□□□□ -0.39
CASC19-250ENST00000641696 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
CASC19-250ENST00000641696 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
CASC19-250ENST00000641696 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
CASC19-250ENST00000641696 URB2Q14146 1524 aaKnown RBP12.58□□□□□ -0.4
CASC19-250ENST00000641696 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
CASC19-250ENST00000641696 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
CASC19-250ENST00000641696 WDR62O43379 1518 aa12.57□□□□□ -0.4
CASC19-250ENST00000641696 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
CASC19-250ENST00000641696 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
CASC19-250ENST00000641696 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms