RNA–Protein interactions for RNA: ENST00000641480.1

CASC19-232, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,244 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-232ENST00000641480 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
CASC19-232ENST00000641480 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
CASC19-232ENST00000641480 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
CASC19-232ENST00000641480 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
CASC19-232ENST00000641480 ABCC9O60706 1549 aa14.82□□□□□ -0.04
CASC19-232ENST00000641480 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
CASC19-232ENST00000641480 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
CASC19-232ENST00000641480 POTEDQ86YR6 584 aa14.11□□□□□ -0.15
CASC19-232ENST00000641480 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
CASC19-232ENST00000641480 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
CASC19-232ENST00000641480 FOXD1Q16676 465 aa14.02□□□□□ -0.17
CASC19-232ENST00000641480 NACADO15069 1562 aa13.92□□□□□ -0.18
CASC19-232ENST00000641480 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
CASC19-232ENST00000641480 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
CASC19-232ENST00000641480 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
CASC19-232ENST00000641480 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
CASC19-232ENST00000641480 UNC13AQ9UPW8 1703 aa13.6□□□□□ -0.23
CASC19-232ENST00000641480 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
CASC19-232ENST00000641480 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.25
CASC19-232ENST00000641480 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
CASC19-232ENST00000641480 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
CASC19-232ENST00000641480 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
CASC19-232ENST00000641480 ZCCHC6Q5VYS8 1495 aaKnown RBP13.31□□□□□ -0.28
CASC19-232ENST00000641480 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
CASC19-232ENST00000641480 MSH5O43196 834 aa13.29□□□□□ -0.28
CASC19-232ENST00000641480 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
CASC19-232ENST00000641480 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
CASC19-232ENST00000641480 CUX2O14529 1486 aa12.97□□□□□ -0.33
CASC19-232ENST00000641480 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
CASC19-232ENST00000641480 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
CASC19-232ENST00000641480 ADRA2BP18089 450 aa12.86□□□□□ -0.35
CASC19-232ENST00000641480 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
CASC19-232ENST00000641480 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
CASC19-232ENST00000641480 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
CASC19-232ENST00000641480 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
CASC19-232ENST00000641480 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
CASC19-232ENST00000641480 NESP48681 1621 aa12.61□□□□□ -0.39
CASC19-232ENST00000641480 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
CASC19-232ENST00000641480 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
CASC19-232ENST00000641480 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
CASC19-232ENST00000641480 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
CASC19-232ENST00000641480 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
CASC19-232ENST00000641480 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
CASC19-232ENST00000641480 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
CASC19-232ENST00000641480 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
CASC19-232ENST00000641480 KCNA4P22459 653 aa12.46□□□□□ -0.41
CASC19-232ENST00000641480 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
CASC19-232ENST00000641480 KIF21AQ7Z4S6 1674 aa12.44□□□□□ -0.42
CASC19-232ENST00000641480 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
CASC19-232ENST00000641480 SUPT5HO00267 1087 aaKnown RBP12.4□□□□□ -0.42
CASC19-232ENST00000641480 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
CASC19-232ENST00000641480 WDR62O43379 1518 aa12.37□□□□□ -0.43
CASC19-232ENST00000641480 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
CASC19-232ENST00000641480 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
CASC19-232ENST00000641480 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
CASC19-232ENST00000641480 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
CASC19-232ENST00000641480 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
CASC19-232ENST00000641480 CFTRP13569 1480 aa12.22□□□□□ -0.45
CASC19-232ENST00000641480 WIZO95785 1651 aa12.19□□□□□ -0.46
CASC19-232ENST00000641480 URB2Q14146 1524 aaKnown RBP12.13□□□□□ -0.47
CASC19-232ENST00000641480 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
CASC19-232ENST00000641480 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
CASC19-232ENST00000641480 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
CASC19-232ENST00000641480 IFT140Q96RY7 1462 aa12.1□□□□□ -0.47
CASC19-232ENST00000641480 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
CASC19-232ENST00000641480 TOP2AP11388 1531 aaKnown RBP12.07□□□□□ -0.48
CASC19-232ENST00000641480 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
CASC19-232ENST00000641480 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
CASC19-232ENST00000641480 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
CASC19-232ENST00000641480 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
CASC19-232ENST00000641480 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
CASC19-232ENST00000641480 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
CASC19-232ENST00000641480 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
CASC19-232ENST00000641480 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
CASC19-232ENST00000641480 FBLN2P98095 1184 aa11.95□□□□□ -0.5
CASC19-232ENST00000641480 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
CASC19-232ENST00000641480 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
CASC19-232ENST00000641480 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
CASC19-232ENST00000641480 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
CASC19-232ENST00000641480 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
CASC19-232ENST00000641480 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
CASC19-232ENST00000641480 CHD1O14646 1710 aa11.89□□□□□ -0.51
CASC19-232ENST00000641480 NPM3O75607 178 aaKnown RBP11.88□□□□□ -0.51
CASC19-232ENST00000641480 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
CASC19-232ENST00000641480 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
CASC19-232ENST00000641480 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
CASC19-232ENST00000641480 CSRNP3Q8WYN3 585 aa11.84□□□□□ -0.51
CASC19-232ENST00000641480 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
CASC19-232ENST00000641480 SOGA1O94964 1423 aa11.84□□□□□ -0.51
CASC19-232ENST00000641480 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
CASC19-232ENST00000641480 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
CASC19-232ENST00000641480 TDRD9Q8NDG6 1382 aaKnown RBP11.81□□□□□ -0.52
CASC19-232ENST00000641480 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
CASC19-232ENST00000641480 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
CASC19-232ENST00000641480 SCAF1Q9H7N4 1312 aaKnown RBP11.8□□□□□ -0.52
CASC19-232ENST00000641480 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
CASC19-232ENST00000641480 SNAPC4Q5SXM2 1469 aa11.77□□□□□ -0.52
CASC19-232ENST00000641480 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
CASC19-232ENST00000641480 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
CASC19-232ENST00000641480 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms