RNA–Protein interactions for RNA: ENST00000641706.1

CASC19-253, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 818 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-253ENST00000641706 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
CASC19-253ENST00000641706 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
CASC19-253ENST00000641706 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
CASC19-253ENST00000641706 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.19
CASC19-253ENST00000641706 SENP3Q9H4L4 574 aaPredicted RBP13.5□□□□□ -0.25
CASC19-253ENST00000641706 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.29
CASC19-253ENST00000641706 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
CASC19-253ENST00000641706 ABCC9O60706 1549 aa13.13□□□□□ -0.31
CASC19-253ENST00000641706 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
CASC19-253ENST00000641706 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
CASC19-253ENST00000641706 NACADO15069 1562 aa12.95□□□□□ -0.34
CASC19-253ENST00000641706 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
CASC19-253ENST00000641706 RB1CC1Q8TDY2 1594 aa12.86□□□□□ -0.35
CASC19-253ENST00000641706 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
CASC19-253ENST00000641706 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
CASC19-253ENST00000641706 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
CASC19-253ENST00000641706 FOXD1Q16676 465 aa12.52□□□□□ -0.41
CASC19-253ENST00000641706 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
CASC19-253ENST00000641706 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.42
CASC19-253ENST00000641706 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
CASC19-253ENST00000641706 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
CASC19-253ENST00000641706 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
CASC19-253ENST00000641706 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
CASC19-253ENST00000641706 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
CASC19-253ENST00000641706 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
CASC19-253ENST00000641706 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
CASC19-253ENST00000641706 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
CASC19-253ENST00000641706 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
CASC19-253ENST00000641706 WIZO95785 1651 aa12.03□□□□□ -0.48
CASC19-253ENST00000641706 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
CASC19-253ENST00000641706 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
CASC19-253ENST00000641706 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
CASC19-253ENST00000641706 MSH5O43196 834 aa11.97□□□□□ -0.49
CASC19-253ENST00000641706 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
CASC19-253ENST00000641706 NCAPD3P42695 1498 aa11.94□□□□□ -0.5
CASC19-253ENST00000641706 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
CASC19-253ENST00000641706 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
CASC19-253ENST00000641706 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
CASC19-253ENST00000641706 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
CASC19-253ENST00000641706 DNAJC5BQ9UF47 199 aa11.65□□□□□ -0.54
CASC19-253ENST00000641706 CFTRP13569 1480 aa11.63□□□□□ -0.55
CASC19-253ENST00000641706 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
CASC19-253ENST00000641706 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
CASC19-253ENST00000641706 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
CASC19-253ENST00000641706 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
CASC19-253ENST00000641706 NESP48681 1621 aa11.49□□□□□ -0.57
CASC19-253ENST00000641706 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
CASC19-253ENST00000641706 FANCD2Q9BXW9 1451 aa11.46□□□□□ -0.57
CASC19-253ENST00000641706 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
CASC19-253ENST00000641706 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
CASC19-253ENST00000641706 CEP164Q9UPV0 1460 aa11.42□□□□□ -0.58
CASC19-253ENST00000641706 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
CASC19-253ENST00000641706 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
CASC19-253ENST00000641706 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
CASC19-253ENST00000641706 ADRA2BP18089 450 aa11.4□□□□□ -0.58
CASC19-253ENST00000641706 CUX1P39880 1505 aa11.4□□□□□ -0.59
CASC19-253ENST00000641706 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
CASC19-253ENST00000641706 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
CASC19-253ENST00000641706 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
CASC19-253ENST00000641706 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
CASC19-253ENST00000641706 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
CASC19-253ENST00000641706 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
CASC19-253ENST00000641706 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
CASC19-253ENST00000641706 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
CASC19-253ENST00000641706 WDR62O43379 1518 aa11.3□□□□□ -0.6
CASC19-253ENST00000641706 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
CASC19-253ENST00000641706 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
CASC19-253ENST00000641706 EEA1Q15075 1411 aa11.26□□□□□ -0.61
CASC19-253ENST00000641706 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
CASC19-253ENST00000641706 SOGA1O94964 1423 aa11.22□□□□□ -0.61
CASC19-253ENST00000641706 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
CASC19-253ENST00000641706 WDR97A6NE52 1622 aa11.21□□□□□ -0.61
CASC19-253ENST00000641706 CUX2O14529 1486 aa11.19□□□□□ -0.62
CASC19-253ENST00000641706 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
CASC19-253ENST00000641706 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
CASC19-253ENST00000641706 RUSC2Q8N2Y8 1516 aa11.17□□□□□ -0.62
CASC19-253ENST00000641706 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
CASC19-253ENST00000641706 IFT140Q96RY7 1462 aa11.16□□□□□ -0.62
CASC19-253ENST00000641706 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
CASC19-253ENST00000641706 KIF21BO75037 1637 aa11.12□□□□□ -0.63
CASC19-253ENST00000641706 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
CASC19-253ENST00000641706 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
CASC19-253ENST00000641706 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
CASC19-253ENST00000641706 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
CASC19-253ENST00000641706 GAPVD1Q14C86 1478 aa11.08□□□□□ -0.64
CASC19-253ENST00000641706 IGF1RP08069 1367 aa11.07□□□□□ -0.64
CASC19-253ENST00000641706 CUL7Q14999 1698 aa11.07□□□□□ -0.64
CASC19-253ENST00000641706 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
CASC19-253ENST00000641706 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
CASC19-253ENST00000641706 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
CASC19-253ENST00000641706 TDRD9Q8NDG6 1382 aaKnown RBP11.05□□□□□ -0.64
CASC19-253ENST00000641706 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
CASC19-253ENST00000641706 GRIN2BQ13224 1484 aa11.04□□□□□ -0.64
CASC19-253ENST00000641706 RAPGEF2Q9Y4G8 1499 aa11.03□□□□□ -0.64
CASC19-253ENST00000641706 AQRO60306 1485 aaKnown RBP eCLIP11.02□□□□□ -0.65
CASC19-253ENST00000641706 CARMIL1Q5VZK9 1371 aa11.02□□□□□ -0.65
CASC19-253ENST00000641706 ADAMTS12P58397 1594 aa11.01□□□□□ -0.65
CASC19-253ENST00000641706 LOC105371045A0A1W2PR82 267 aa11□□□□□ -0.65
CASC19-253ENST00000641706 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
CASC19-253ENST00000641706 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms