RNA–Protein interactions for RNA: ENST00000641604.1

CASC19-244, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,251 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-244ENST00000641604 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
CASC19-244ENST00000641604 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
CASC19-244ENST00000641604 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
CASC19-244ENST00000641604 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.69
CASC19-244ENST00000641604 FOXD1Q16676 465 aa24.19■■□□□ 1.46
CASC19-244ENST00000641604 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
CASC19-244ENST00000641604 MSH5O43196 834 aa22.72■■□□□ 1.23
CASC19-244ENST00000641604 PIAS4Q8N2W9 510 aaPredicted RBP22.57■■□□□ 1.2
CASC19-244ENST00000641604 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
CASC19-244ENST00000641604 ADRA2BP18089 450 aa22.42■■□□□ 1.18
CASC19-244ENST00000641604 POTEDQ86YR6 584 aa22.35■■□□□ 1.17
CASC19-244ENST00000641604 MAPK8IP2Q13387 824 aaPredicted RBP20.62■□□□□ 0.89
CASC19-244ENST00000641604 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
CASC19-244ENST00000641604 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
CASC19-244ENST00000641604 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
CASC19-244ENST00000641604 HOXD11P31277 338 aaPredicted RBP19.76■□□□□ 0.75
CASC19-244ENST00000641604 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
CASC19-244ENST00000641604 DCAF8L1A6NGE4 600 aa19.68■□□□□ 0.74
CASC19-244ENST00000641604 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
CASC19-244ENST00000641604 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
CASC19-244ENST00000641604 RNF39Q9H2S5 420 aa19.36■□□□□ 0.69
CASC19-244ENST00000641604 NCBP3Q53F19 620 aaKnown RBP19.27■□□□□ 0.68
CASC19-244ENST00000641604 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
CASC19-244ENST00000641604 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
CASC19-244ENST00000641604 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
CASC19-244ENST00000641604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
CASC19-244ENST00000641604 KCNA4P22459 653 aa18.47■□□□□ 0.55
CASC19-244ENST00000641604 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
CASC19-244ENST00000641604 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
CASC19-244ENST00000641604 CAPN15O75808 1086 aa18.14■□□□□ 0.49
CASC19-244ENST00000641604 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
CASC19-244ENST00000641604 DSG3P32926 999 aa18.07■□□□□ 0.48
CASC19-244ENST00000641604 APLP2Q06481 763 aa17.92■□□□□ 0.46
CASC19-244ENST00000641604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
CASC19-244ENST00000641604 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
CASC19-244ENST00000641604 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
CASC19-244ENST00000641604 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
CASC19-244ENST00000641604 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
CASC19-244ENST00000641604 ABCB7O75027 752 aa17.69■□□□□ 0.42
CASC19-244ENST00000641604 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
CASC19-244ENST00000641604 POTEHQ6S545 545 aa17.49■□□□□ 0.39
CASC19-244ENST00000641604 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
CASC19-244ENST00000641604 POLA2Q14181 598 aa17.33■□□□□ 0.36
CASC19-244ENST00000641604 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
CASC19-244ENST00000641604 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
CASC19-244ENST00000641604 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
CASC19-244ENST00000641604 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
CASC19-244ENST00000641604 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
CASC19-244ENST00000641604 ZBTB22O15209 634 aa16.96■□□□□ 0.31
CASC19-244ENST00000641604 CHRDL2Q6WN34 429 aa16.93■□□□□ 0.3
CASC19-244ENST00000641604 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
CASC19-244ENST00000641604 ATXN8OSP0DMR3 200 aa16.81■□□□□ 0.28
CASC19-244ENST00000641604 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
CASC19-244ENST00000641604 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
CASC19-244ENST00000641604 FBLN2P98095 1184 aa16.51■□□□□ 0.23
CASC19-244ENST00000641604 PITPNM1O00562 1244 aa16.49■□□□□ 0.23
CASC19-244ENST00000641604 PIP4P2Q8N4L2 257 aa16.49■□□□□ 0.23
CASC19-244ENST00000641604 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
CASC19-244ENST00000641604 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
CASC19-244ENST00000641604 SPDYE2Q495Y8 402 aa16.44■□□□□ 0.22
CASC19-244ENST00000641604 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
CASC19-244ENST00000641604 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
CASC19-244ENST00000641604 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
CASC19-244ENST00000641604 HAX1O00165 279 aa16.23■□□□□ 0.19
CASC19-244ENST00000641604 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
CASC19-244ENST00000641604 SSUH2Q9Y2M2 353 aa16.2■□□□□ 0.18
CASC19-244ENST00000641604 SPDYE1Q8NFV5 336 aaPredicted RBP16.19■□□□□ 0.18
CASC19-244ENST00000641604 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
CASC19-244ENST00000641604 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
CASC19-244ENST00000641604 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
CASC19-244ENST00000641604 EVX2Q03828 476 aa16■□□□□ 0.15
CASC19-244ENST00000641604 ABCC9O60706 1549 aa15.98■□□□□ 0.15
CASC19-244ENST00000641604 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
CASC19-244ENST00000641604 C19orf67A6NJJ6 358 aa15.87■□□□□ 0.13
CASC19-244ENST00000641604 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
CASC19-244ENST00000641604 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
CASC19-244ENST00000641604 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
CASC19-244ENST00000641604 GABBR2O75899 941 aa15.65■□□□□ 0.1
CASC19-244ENST00000641604 FARP1Q9Y4F1 1045 aaPredicted RBP15.62■□□□□ 0.09
CASC19-244ENST00000641604 CD44P16070 742 aaKnown RBP15.54■□□□□ 0.08
CASC19-244ENST00000641604 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
CASC19-244ENST00000641604 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
CASC19-244ENST00000641604 SPDYE4A6NLX3 237 aa15.52■□□□□ 0.08
CASC19-244ENST00000641604 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
CASC19-244ENST00000641604 CLCN6P51797 869 aa15.43■□□□□ 0.06
CASC19-244ENST00000641604 LHX8Q68G74 356 aa15.33■□□□□ 0.04
CASC19-244ENST00000641604 ZNF579Q8NAF0 562 aaKnown RBP15.32■□□□□ 0.04
CASC19-244ENST00000641604 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
CASC19-244ENST00000641604 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
CASC19-244ENST00000641604 DCBLD2Q96PD2 775 aa15.21■□□□□ 0.03
CASC19-244ENST00000641604 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
CASC19-244ENST00000641604 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
CASC19-244ENST00000641604 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
CASC19-244ENST00000641604 PROM2Q8N271 834 aa15.15■□□□□ 0.02
CASC19-244ENST00000641604 GALR2O43603 387 aaPredicted RBP15.11■□□□□ 0.01
CASC19-244ENST00000641604 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
CASC19-244ENST00000641604 PHF12Q96QT6 1004 aa15.06■□□□□ 0
CASC19-244ENST00000641604 NACADO15069 1562 aa14.88□□□□□ -0.03
CASC19-244ENST00000641604 MS4A3Q96HJ5 214 aa14.86□□□□□ -0.03
CASC19-244ENST00000641604 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms