RNA–Protein interactions for RNA: ENST00000641218.1

CASC19-218, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,522 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-218ENST00000641218 AEBP2Q6ZN18 517 aaPredicted RBP25.9■■□□□ 1.74
CASC19-218ENST00000641218 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
CASC19-218ENST00000641218 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
CASC19-218ENST00000641218 PHF23Q9BUL5 403 aaPredicted RBP21.83■■□□□ 1.09
CASC19-218ENST00000641218 FOXD1Q16676 465 aa20.48■□□□□ 0.87
CASC19-218ENST00000641218 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
CASC19-218ENST00000641218 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
CASC19-218ENST00000641218 ADRA2BP18089 450 aa19.3■□□□□ 0.68
CASC19-218ENST00000641218 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
CASC19-218ENST00000641218 MSH5O43196 834 aa19■□□□□ 0.63
CASC19-218ENST00000641218 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
CASC19-218ENST00000641218 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
CASC19-218ENST00000641218 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
CASC19-218ENST00000641218 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
CASC19-218ENST00000641218 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
CASC19-218ENST00000641218 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
CASC19-218ENST00000641218 ABCC9O60706 1549 aa17.5■□□□□ 0.39
CASC19-218ENST00000641218 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
CASC19-218ENST00000641218 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
CASC19-218ENST00000641218 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
CASC19-218ENST00000641218 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
CASC19-218ENST00000641218 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
CASC19-218ENST00000641218 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
CASC19-218ENST00000641218 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
CASC19-218ENST00000641218 KCNA4P22459 653 aa16.61■□□□□ 0.25
CASC19-218ENST00000641218 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
CASC19-218ENST00000641218 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
CASC19-218ENST00000641218 NACADO15069 1562 aa16.32■□□□□ 0.2
CASC19-218ENST00000641218 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
CASC19-218ENST00000641218 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
CASC19-218ENST00000641218 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
CASC19-218ENST00000641218 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
CASC19-218ENST00000641218 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
CASC19-218ENST00000641218 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
CASC19-218ENST00000641218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
CASC19-218ENST00000641218 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
CASC19-218ENST00000641218 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
CASC19-218ENST00000641218 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.15
CASC19-218ENST00000641218 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
CASC19-218ENST00000641218 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
CASC19-218ENST00000641218 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
CASC19-218ENST00000641218 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
CASC19-218ENST00000641218 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
CASC19-218ENST00000641218 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
CASC19-218ENST00000641218 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
CASC19-218ENST00000641218 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
CASC19-218ENST00000641218 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.07
CASC19-218ENST00000641218 CUX2O14529 1486 aa15.51■□□□□ 0.07
CASC19-218ENST00000641218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
CASC19-218ENST00000641218 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
CASC19-218ENST00000641218 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
CASC19-218ENST00000641218 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
CASC19-218ENST00000641218 CAPN15O75808 1086 aa15.39■□□□□ 0.05
CASC19-218ENST00000641218 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
CASC19-218ENST00000641218 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
CASC19-218ENST00000641218 DSG3P32926 999 aa15.35■□□□□ 0.05
CASC19-218ENST00000641218 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
CASC19-218ENST00000641218 APLP2Q06481 763 aa15.33■□□□□ 0.05
CASC19-218ENST00000641218 ZBTB22O15209 634 aa15.33■□□□□ 0.04
CASC19-218ENST00000641218 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
CASC19-218ENST00000641218 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
CASC19-218ENST00000641218 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
CASC19-218ENST00000641218 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
CASC19-218ENST00000641218 ABCB7O75027 752 aa15.09■□□□□ 0.01
CASC19-218ENST00000641218 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
CASC19-218ENST00000641218 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
CASC19-218ENST00000641218 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
CASC19-218ENST00000641218 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
CASC19-218ENST00000641218 POLA2Q14181 598 aa14.92□□□□□ -0.02
CASC19-218ENST00000641218 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
CASC19-218ENST00000641218 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
CASC19-218ENST00000641218 NESP48681 1621 aa14.88□□□□□ -0.03
CASC19-218ENST00000641218 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
CASC19-218ENST00000641218 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
CASC19-218ENST00000641218 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
CASC19-218ENST00000641218 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
CASC19-218ENST00000641218 PEG3Q9GZU2 1588 aa14.69□□□□□ -0.06
CASC19-218ENST00000641218 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
CASC19-218ENST00000641218 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
CASC19-218ENST00000641218 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
CASC19-218ENST00000641218 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
CASC19-218ENST00000641218 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
CASC19-218ENST00000641218 WDR62O43379 1518 aa14.63□□□□□ -0.07
CASC19-218ENST00000641218 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
CASC19-218ENST00000641218 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
CASC19-218ENST00000641218 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
CASC19-218ENST00000641218 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
CASC19-218ENST00000641218 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
CASC19-218ENST00000641218 RIMBP3CA6NJZ7 1639 aa14.45□□□□□ -0.1
CASC19-218ENST00000641218 RIMBP3BA6NNM3 1639 aa14.45□□□□□ -0.1
CASC19-218ENST00000641218 RIMBP3Q9UFD9 1639 aa14.45□□□□□ -0.1
CASC19-218ENST00000641218 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
CASC19-218ENST00000641218 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
CASC19-218ENST00000641218 ARHGEF11O15085 1522 aa14.38□□□□□ -0.11
CASC19-218ENST00000641218 FBLN2P98095 1184 aa14.36□□□□□ -0.11
CASC19-218ENST00000641218 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
CASC19-218ENST00000641218 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
CASC19-218ENST00000641218 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
CASC19-218ENST00000641218 CFTRP13569 1480 aa14.3□□□□□ -0.12
CASC19-218ENST00000641218 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms