RNA–Protein interactions for RNA: ENST00000641153.1

CASC19-212, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,287 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-212ENST00000641153 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CASC19-212ENST00000641153 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
CASC19-212ENST00000641153 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
CASC19-212ENST00000641153 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
CASC19-212ENST00000641153 FOXD1Q16676 465 aa16.36■□□□□ 0.21
CASC19-212ENST00000641153 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
CASC19-212ENST00000641153 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
CASC19-212ENST00000641153 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
CASC19-212ENST00000641153 ADRA2BP18089 450 aa15.42■□□□□ 0.06
CASC19-212ENST00000641153 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
CASC19-212ENST00000641153 MSH5O43196 834 aa15.2■□□□□ 0.02
CASC19-212ENST00000641153 ABCC9O60706 1549 aa15.1■□□□□ 0.01
CASC19-212ENST00000641153 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
CASC19-212ENST00000641153 POTEDQ86YR6 584 aa14.54□□□□□ -0.08
CASC19-212ENST00000641153 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
CASC19-212ENST00000641153 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
CASC19-212ENST00000641153 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
CASC19-212ENST00000641153 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
CASC19-212ENST00000641153 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
CASC19-212ENST00000641153 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
CASC19-212ENST00000641153 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
CASC19-212ENST00000641153 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
CASC19-212ENST00000641153 NACADO15069 1562 aa13.75□□□□□ -0.21
CASC19-212ENST00000641153 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
CASC19-212ENST00000641153 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
CASC19-212ENST00000641153 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
CASC19-212ENST00000641153 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
CASC19-212ENST00000641153 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
CASC19-212ENST00000641153 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
CASC19-212ENST00000641153 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
CASC19-212ENST00000641153 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
CASC19-212ENST00000641153 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
CASC19-212ENST00000641153 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
CASC19-212ENST00000641153 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
CASC19-212ENST00000641153 MYO15BQ96JP2 1530 aa13.31□□□□□ -0.28
CASC19-212ENST00000641153 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
CASC19-212ENST00000641153 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
CASC19-212ENST00000641153 KCNA4P22459 653 aa13.2□□□□□ -0.3
CASC19-212ENST00000641153 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
CASC19-212ENST00000641153 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
CASC19-212ENST00000641153 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
CASC19-212ENST00000641153 CUX2O14529 1486 aa13.04□□□□□ -0.32
CASC19-212ENST00000641153 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
CASC19-212ENST00000641153 RNF39Q9H2S5 420 aa13□□□□□ -0.33
CASC19-212ENST00000641153 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
CASC19-212ENST00000641153 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
CASC19-212ENST00000641153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
CASC19-212ENST00000641153 NESP48681 1621 aa12.86□□□□□ -0.35
CASC19-212ENST00000641153 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
CASC19-212ENST00000641153 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
CASC19-212ENST00000641153 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
CASC19-212ENST00000641153 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
CASC19-212ENST00000641153 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
CASC19-212ENST00000641153 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASC19-212ENST00000641153 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
CASC19-212ENST00000641153 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
CASC19-212ENST00000641153 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
CASC19-212ENST00000641153 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
CASC19-212ENST00000641153 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CASC19-212ENST00000641153 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
CASC19-212ENST00000641153 LAMC3Q9Y6N6 1575 aa12.49□□□□□ -0.41
CASC19-212ENST00000641153 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
CASC19-212ENST00000641153 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
CASC19-212ENST00000641153 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
CASC19-212ENST00000641153 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
CASC19-212ENST00000641153 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
CASC19-212ENST00000641153 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
CASC19-212ENST00000641153 WDR62O43379 1518 aa12.37□□□□□ -0.43
CASC19-212ENST00000641153 CAPN15O75808 1086 aa12.36□□□□□ -0.43
CASC19-212ENST00000641153 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
CASC19-212ENST00000641153 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
CASC19-212ENST00000641153 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
CASC19-212ENST00000641153 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
CASC19-212ENST00000641153 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
CASC19-212ENST00000641153 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
CASC19-212ENST00000641153 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
CASC19-212ENST00000641153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
CASC19-212ENST00000641153 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
CASC19-212ENST00000641153 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
CASC19-212ENST00000641153 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
CASC19-212ENST00000641153 DSG3P32926 999 aa12.25□□□□□ -0.45
CASC19-212ENST00000641153 APLP2Q06481 763 aa12.25□□□□□ -0.45
CASC19-212ENST00000641153 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
CASC19-212ENST00000641153 FANCD2Q9BXW9 1451 aa12.25□□□□□ -0.45
CASC19-212ENST00000641153 ARHGEF11O15085 1522 aa12.25□□□□□ -0.45
CASC19-212ENST00000641153 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
CASC19-212ENST00000641153 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
CASC19-212ENST00000641153 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
CASC19-212ENST00000641153 WIZO95785 1651 aa12.19□□□□□ -0.46
CASC19-212ENST00000641153 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
CASC19-212ENST00000641153 ZBTB22O15209 634 aa12.14□□□□□ -0.47
CASC19-212ENST00000641153 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
CASC19-212ENST00000641153 CFTRP13569 1480 aa12.11□□□□□ -0.47
CASC19-212ENST00000641153 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
CASC19-212ENST00000641153 ABCB7O75027 752 aa12.1□□□□□ -0.47
CASC19-212ENST00000641153 FBLN2P98095 1184 aa12.1□□□□□ -0.47
CASC19-212ENST00000641153 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.483e-6■■■■□ 24.7
CASC19-212ENST00000641153 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
CASC19-212ENST00000641153 CHD1O14646 1710 aa12.02□□□□□ -0.49
CASC19-212ENST00000641153 HRCP23327 699 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms