RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
CASC19-205ENST00000641013 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
CASC19-205ENST00000641013 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CASC19-205ENST00000641013 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
CASC19-205ENST00000641013 FOXD1Q16676 465 aa16.21■□□□□ 0.19
CASC19-205ENST00000641013 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
CASC19-205ENST00000641013 MSH5O43196 834 aa15.27■□□□□ 0.04
CASC19-205ENST00000641013 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
CASC19-205ENST00000641013 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
CASC19-205ENST00000641013 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
CASC19-205ENST00000641013 ADRA2BP18089 450 aa15.04■□□□□ -0
CASC19-205ENST00000641013 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
CASC19-205ENST00000641013 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
CASC19-205ENST00000641013 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
CASC19-205ENST00000641013 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
CASC19-205ENST00000641013 PELP1Q8IZL8 1130 aaKnown RBP13.65□□□□□ -0.22
CASC19-205ENST00000641013 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
CASC19-205ENST00000641013 MYT1Q01538 1121 aa13.4□□□□□ -0.26
CASC19-205ENST00000641013 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
CASC19-205ENST00000641013 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
CASC19-205ENST00000641013 HRCP23327 699 aa13.22□□□□□ -0.29
CASC19-205ENST00000641013 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
CASC19-205ENST00000641013 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
CASC19-205ENST00000641013 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
CASC19-205ENST00000641013 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
CASC19-205ENST00000641013 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
CASC19-205ENST00000641013 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
CASC19-205ENST00000641013 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
CASC19-205ENST00000641013 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.37
CASC19-205ENST00000641013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
CASC19-205ENST00000641013 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
CASC19-205ENST00000641013 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
CASC19-205ENST00000641013 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
CASC19-205ENST00000641013 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
CASC19-205ENST00000641013 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
CASC19-205ENST00000641013 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
CASC19-205ENST00000641013 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
CASC19-205ENST00000641013 KCNA4P22459 653 aa12.34□□□□□ -0.43
CASC19-205ENST00000641013 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
CASC19-205ENST00000641013 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
CASC19-205ENST00000641013 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
CASC19-205ENST00000641013 CAPN15O75808 1086 aa12.23□□□□□ -0.45
CASC19-205ENST00000641013 CENPBP07199 599 aaPredicted RBP12.22□□□□□ -0.45
CASC19-205ENST00000641013 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
CASC19-205ENST00000641013 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
CASC19-205ENST00000641013 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
CASC19-205ENST00000641013 DSG3P32926 999 aa12.11□□□□□ -0.47
CASC19-205ENST00000641013 APLP2Q06481 763 aa12.08□□□□□ -0.48
CASC19-205ENST00000641013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
CASC19-205ENST00000641013 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
CASC19-205ENST00000641013 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
CASC19-205ENST00000641013 GTF3C3Q9Y5Q9 886 aa12.03□□□□□ -0.48
CASC19-205ENST00000641013 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
CASC19-205ENST00000641013 CLSPNQ9HAW4 1339 aa11.99□□□□□ -0.49
CASC19-205ENST00000641013 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
CASC19-205ENST00000641013 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
CASC19-205ENST00000641013 SHROOM4Q9ULL8 1493 aa11.93□□□□□ -0.5
CASC19-205ENST00000641013 ABCB7O75027 752 aa11.9□□□□□ -0.5
CASC19-205ENST00000641013 ZCCHC6Q5VYS8 1495 aaKnown RBP11.88□□□□□ -0.51
CASC19-205ENST00000641013 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
CASC19-205ENST00000641013 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
CASC19-205ENST00000641013 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
CASC19-205ENST00000641013 ANP32EQ9BTT0 268 aa11.8□□□□□ -0.52
CASC19-205ENST00000641013 POTEHQ6S545 545 aa11.78□□□□□ -0.52
CASC19-205ENST00000641013 LOC105371045A0A1W2PR82 267 aa11.77□□□□□ -0.52
CASC19-205ENST00000641013 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
CASC19-205ENST00000641013 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
CASC19-205ENST00000641013 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
CASC19-205ENST00000641013 POLA2Q14181 598 aa11.66□□□□□ -0.54
CASC19-205ENST00000641013 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
CASC19-205ENST00000641013 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
CASC19-205ENST00000641013 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
CASC19-205ENST00000641013 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
CASC19-205ENST00000641013 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
CASC19-205ENST00000641013 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
CASC19-205ENST00000641013 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
CASC19-205ENST00000641013 TSHZ2Q9NRE2 1034 aa11.49□□□□□ -0.57
CASC19-205ENST00000641013 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
CASC19-205ENST00000641013 SUPT16HQ9Y5B9 1047 aaKnown RBP11.45□□□□□ -0.58
CASC19-205ENST00000641013 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
CASC19-205ENST00000641013 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
CASC19-205ENST00000641013 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
CASC19-205ENST00000641013 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
CASC19-205ENST00000641013 MIER1Q8N108 512 aa11.38□□□□□ -0.59
CASC19-205ENST00000641013 YTHDC1Q96MU7 727 aaKnown RBP11.35□□□□□ -0.59
CASC19-205ENST00000641013 ERICH6BQ5W0A0 696 aa11.32□□□□□ -0.6
CASC19-205ENST00000641013 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
CASC19-205ENST00000641013 ABCC9O60706 1549 aa11.32□□□□□ -0.6
CASC19-205ENST00000641013 ZBTB22O15209 634 aa11.29□□□□□ -0.6
CASC19-205ENST00000641013 RB1CC1Q8TDY2 1594 aa11.27□□□□□ -0.61
CASC19-205ENST00000641013 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
CASC19-205ENST00000641013 ATXN8OSP0DMR3 200 aa11.25□□□□□ -0.61
CASC19-205ENST00000641013 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
CASC19-205ENST00000641013 RBM19Q9Y4C8 960 aaKnown RBP11.21□□□□□ -0.61
CASC19-205ENST00000641013 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
CASC19-205ENST00000641013 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
CASC19-205ENST00000641013 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
CASC19-205ENST00000641013 NEFLP07196 543 aa11.13□□□□□ -0.63
CASC19-205ENST00000641013 FBLN2P98095 1184 aa11.12□□□□□ -0.63
CASC19-205ENST00000641013 EEA1Q15075 1411 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms