RNA–Protein interactions for RNA: ENST00000641547.1

CASC19-239, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 915 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-239ENST00000641547 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
CASC19-239ENST00000641547 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
CASC19-239ENST00000641547 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
CASC19-239ENST00000641547 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
CASC19-239ENST00000641547 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CASC19-239ENST00000641547 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
CASC19-239ENST00000641547 MSH5O43196 834 aa23.73■■□□□ 1.39
CASC19-239ENST00000641547 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
CASC19-239ENST00000641547 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
CASC19-239ENST00000641547 ADRA2BP18089 450 aa23.54■■□□□ 1.36
CASC19-239ENST00000641547 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
CASC19-239ENST00000641547 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
CASC19-239ENST00000641547 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CASC19-239ENST00000641547 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
CASC19-239ENST00000641547 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
CASC19-239ENST00000641547 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
CASC19-239ENST00000641547 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
CASC19-239ENST00000641547 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
CASC19-239ENST00000641547 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
CASC19-239ENST00000641547 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
CASC19-239ENST00000641547 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
CASC19-239ENST00000641547 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
CASC19-239ENST00000641547 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
CASC19-239ENST00000641547 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
CASC19-239ENST00000641547 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
CASC19-239ENST00000641547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
CASC19-239ENST00000641547 KCNA4P22459 653 aa19.59■□□□□ 0.73
CASC19-239ENST00000641547 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
CASC19-239ENST00000641547 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
CASC19-239ENST00000641547 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
CASC19-239ENST00000641547 CAPN15O75808 1086 aa18.95■□□□□ 0.62
CASC19-239ENST00000641547 DSG3P32926 999 aa18.95■□□□□ 0.62
CASC19-239ENST00000641547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
CASC19-239ENST00000641547 APLP2Q06481 763 aa18.77■□□□□ 0.6
CASC19-239ENST00000641547 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
CASC19-239ENST00000641547 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
CASC19-239ENST00000641547 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
CASC19-239ENST00000641547 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
CASC19-239ENST00000641547 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
CASC19-239ENST00000641547 ABCB7O75027 752 aa18.51■□□□□ 0.55
CASC19-239ENST00000641547 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
CASC19-239ENST00000641547 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
CASC19-239ENST00000641547 POTEHQ6S545 545 aa18.18■□□□□ 0.5
CASC19-239ENST00000641547 POLA2Q14181 598 aa18.17■□□□□ 0.5
CASC19-239ENST00000641547 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
CASC19-239ENST00000641547 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
CASC19-239ENST00000641547 ZBTB22O15209 634 aa18.05■□□□□ 0.48
CASC19-239ENST00000641547 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
CASC19-239ENST00000641547 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
CASC19-239ENST00000641547 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
CASC19-239ENST00000641547 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
CASC19-239ENST00000641547 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
CASC19-239ENST00000641547 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
CASC19-239ENST00000641547 FBLN2P98095 1184 aa17.33■□□□□ 0.36
CASC19-239ENST00000641547 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
CASC19-239ENST00000641547 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
CASC19-239ENST00000641547 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
CASC19-239ENST00000641547 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
CASC19-239ENST00000641547 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CASC19-239ENST00000641547 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
CASC19-239ENST00000641547 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
CASC19-239ENST00000641547 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
CASC19-239ENST00000641547 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
CASC19-239ENST00000641547 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
CASC19-239ENST00000641547 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
CASC19-239ENST00000641547 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
CASC19-239ENST00000641547 HAX1O00165 279 aa16.87■□□□□ 0.29
CASC19-239ENST00000641547 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
CASC19-239ENST00000641547 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
CASC19-239ENST00000641547 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
CASC19-239ENST00000641547 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
CASC19-239ENST00000641547 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
CASC19-239ENST00000641547 EVX2Q03828 476 aa16.74■□□□□ 0.27
CASC19-239ENST00000641547 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
CASC19-239ENST00000641547 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
CASC19-239ENST00000641547 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
CASC19-239ENST00000641547 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
CASC19-239ENST00000641547 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
CASC19-239ENST00000641547 GABBR2O75899 941 aa16.35■□□□□ 0.21
CASC19-239ENST00000641547 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
CASC19-239ENST00000641547 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
CASC19-239ENST00000641547 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
CASC19-239ENST00000641547 CLCN6P51797 869 aa16.15■□□□□ 0.18
CASC19-239ENST00000641547 PROM2Q8N271 834 aa16.14■□□□□ 0.17
CASC19-239ENST00000641547 ZNF579Q8NAF0 562 aaKnown RBP16.09■□□□□ 0.17
CASC19-239ENST00000641547 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
CASC19-239ENST00000641547 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CASC19-239ENST00000641547 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
CASC19-239ENST00000641547 LHX8Q68G74 356 aa15.94■□□□□ 0.14
CASC19-239ENST00000641547 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
CASC19-239ENST00000641547 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
CASC19-239ENST00000641547 GALR2O43603 387 aaPredicted RBP15.85■□□□□ 0.13
CASC19-239ENST00000641547 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
CASC19-239ENST00000641547 PHF12Q96QT6 1004 aa15.8■□□□□ 0.12
CASC19-239ENST00000641547 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
CASC19-239ENST00000641547 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
CASC19-239ENST00000641547 MIER1Q8N108 512 aa15.58■□□□□ 0.08
CASC19-239ENST00000641547 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
CASC19-239ENST00000641547 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
CASC19-239ENST00000641547 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms