RNA–Protein interactions for RNA: ENST00000641547.1

CASC19-239, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-239ENST00000641547 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
CASC19-239ENST00000641547 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
CASC19-239ENST00000641547 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
CASC19-239ENST00000641547 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
CASC19-239ENST00000641547 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CASC19-239ENST00000641547 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
CASC19-239ENST00000641547 MSH5O43196 834 aa23.73■■□□□ 1.39
CASC19-239ENST00000641547 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
CASC19-239ENST00000641547 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
CASC19-239ENST00000641547 ADRA2BP18089 450 aa23.54■■□□□ 1.36
CASC19-239ENST00000641547 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
CASC19-239ENST00000641547 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
CASC19-239ENST00000641547 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CASC19-239ENST00000641547 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
CASC19-239ENST00000641547 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
CASC19-239ENST00000641547 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
CASC19-239ENST00000641547 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
CASC19-239ENST00000641547 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
CASC19-239ENST00000641547 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
CASC19-239ENST00000641547 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
CASC19-239ENST00000641547 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
CASC19-239ENST00000641547 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
CASC19-239ENST00000641547 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
CASC19-239ENST00000641547 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
CASC19-239ENST00000641547 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
CASC19-239ENST00000641547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
CASC19-239ENST00000641547 KCNA4P22459 653 aa19.59■□□□□ 0.73
CASC19-239ENST00000641547 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
CASC19-239ENST00000641547 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
CASC19-239ENST00000641547 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
CASC19-239ENST00000641547 CAPN15O75808 1086 aa18.95■□□□□ 0.62
CASC19-239ENST00000641547 DSG3P32926 999 aa18.95■□□□□ 0.62
CASC19-239ENST00000641547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
CASC19-239ENST00000641547 APLP2Q06481 763 aa18.77■□□□□ 0.6
CASC19-239ENST00000641547 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
CASC19-239ENST00000641547 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
CASC19-239ENST00000641547 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
CASC19-239ENST00000641547 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
CASC19-239ENST00000641547 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
CASC19-239ENST00000641547 ABCB7O75027 752 aa18.51■□□□□ 0.55
CASC19-239ENST00000641547 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
CASC19-239ENST00000641547 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
CASC19-239ENST00000641547 POTEHQ6S545 545 aa18.18■□□□□ 0.5
CASC19-239ENST00000641547 POLA2Q14181 598 aa18.17■□□□□ 0.5
CASC19-239ENST00000641547 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
CASC19-239ENST00000641547 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
CASC19-239ENST00000641547 ZBTB22O15209 634 aa18.05■□□□□ 0.48
CASC19-239ENST00000641547 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
CASC19-239ENST00000641547 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
CASC19-239ENST00000641547 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
CASC19-239ENST00000641547 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
CASC19-239ENST00000641547 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
CASC19-239ENST00000641547 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
CASC19-239ENST00000641547 FBLN2P98095 1184 aa17.33■□□□□ 0.36
CASC19-239ENST00000641547 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
CASC19-239ENST00000641547 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
CASC19-239ENST00000641547 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
CASC19-239ENST00000641547 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
CASC19-239ENST00000641547 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CASC19-239ENST00000641547 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
CASC19-239ENST00000641547 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
CASC19-239ENST00000641547 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
CASC19-239ENST00000641547 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
CASC19-239ENST00000641547 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
CASC19-239ENST00000641547 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
CASC19-239ENST00000641547 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
CASC19-239ENST00000641547 HAX1O00165 279 aa16.87■□□□□ 0.29
CASC19-239ENST00000641547 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
CASC19-239ENST00000641547 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
CASC19-239ENST00000641547 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
CASC19-239ENST00000641547 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
CASC19-239ENST00000641547 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
CASC19-239ENST00000641547 EVX2Q03828 476 aa16.74■□□□□ 0.27
CASC19-239ENST00000641547 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
CASC19-239ENST00000641547 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
CASC19-239ENST00000641547 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
CASC19-239ENST00000641547 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
CASC19-239ENST00000641547 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
CASC19-239ENST00000641547 GABBR2O75899 941 aa16.35■□□□□ 0.21
CASC19-239ENST00000641547 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
CASC19-239ENST00000641547 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
CASC19-239ENST00000641547 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
CASC19-239ENST00000641547 CLCN6P51797 869 aa16.15■□□□□ 0.18
CASC19-239ENST00000641547 PROM2Q8N271 834 aa16.14■□□□□ 0.17
CASC19-239ENST00000641547 ZNF579Q8NAF0 562 aaKnown RBP16.09■□□□□ 0.17
CASC19-239ENST00000641547 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
CASC19-239ENST00000641547 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CASC19-239ENST00000641547 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
CASC19-239ENST00000641547 LHX8Q68G74 356 aa15.94■□□□□ 0.14
CASC19-239ENST00000641547 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
CASC19-239ENST00000641547 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
CASC19-239ENST00000641547 GALR2O43603 387 aaPredicted RBP15.85■□□□□ 0.13
CASC19-239ENST00000641547 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
CASC19-239ENST00000641547 PHF12Q96QT6 1004 aa15.8■□□□□ 0.12
CASC19-239ENST00000641547 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
CASC19-239ENST00000641547 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
CASC19-239ENST00000641547 MIER1Q8N108 512 aa15.58■□□□□ 0.08
CASC19-239ENST00000641547 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
CASC19-239ENST00000641547 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
CASC19-239ENST00000641547 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms