RNA–Protein interactions for RNA: ENST00000642018.1

CASC19-274, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 970 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-274ENST00000642018 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
CASC19-274ENST00000642018 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
CASC19-274ENST00000642018 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
CASC19-274ENST00000642018 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
CASC19-274ENST00000642018 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
CASC19-274ENST00000642018 FOXD1Q16676 465 aa17.37■□□□□ 0.37
CASC19-274ENST00000642018 ADRA2BP18089 450 aa16.97■□□□□ 0.31
CASC19-274ENST00000642018 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
CASC19-274ENST00000642018 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
CASC19-274ENST00000642018 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
CASC19-274ENST00000642018 MSH5O43196 834 aa16.34■□□□□ 0.21
CASC19-274ENST00000642018 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
CASC19-274ENST00000642018 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
CASC19-274ENST00000642018 KCNA4P22459 653 aa15.9■□□□□ 0.14
CASC19-274ENST00000642018 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
CASC19-274ENST00000642018 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
CASC19-274ENST00000642018 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
CASC19-274ENST00000642018 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
CASC19-274ENST00000642018 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
CASC19-274ENST00000642018 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
CASC19-274ENST00000642018 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
CASC19-274ENST00000642018 RNF216Q9NWF9 866 aaPredicted RBP15.1■□□□□ 0.01
CASC19-274ENST00000642018 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
CASC19-274ENST00000642018 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
CASC19-274ENST00000642018 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
CASC19-274ENST00000642018 ABCC9O60706 1549 aa14.82□□□□□ -0.04
CASC19-274ENST00000642018 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
CASC19-274ENST00000642018 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
CASC19-274ENST00000642018 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
CASC19-274ENST00000642018 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
CASC19-274ENST00000642018 ZBTB22O15209 634 aa14.52□□□□□ -0.09
CASC19-274ENST00000642018 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
CASC19-274ENST00000642018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
CASC19-274ENST00000642018 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
CASC19-274ENST00000642018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
CASC19-274ENST00000642018 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
CASC19-274ENST00000642018 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
CASC19-274ENST00000642018 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
CASC19-274ENST00000642018 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
CASC19-274ENST00000642018 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
CASC19-274ENST00000642018 APLP2Q06481 763 aa14.04□□□□□ -0.16
CASC19-274ENST00000642018 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
CASC19-274ENST00000642018 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
CASC19-274ENST00000642018 NACADO15069 1562 aa13.92□□□□□ -0.18
CASC19-274ENST00000642018 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
CASC19-274ENST00000642018 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
CASC19-274ENST00000642018 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
CASC19-274ENST00000642018 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
CASC19-274ENST00000642018 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
CASC19-274ENST00000642018 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
CASC19-274ENST00000642018 UNC13AQ9UPW8 1703 aa13.6□□□□□ -0.23
CASC19-274ENST00000642018 CAPN15O75808 1086 aa13.58□□□□□ -0.24
CASC19-274ENST00000642018 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
CASC19-274ENST00000642018 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
CASC19-274ENST00000642018 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.25
CASC19-274ENST00000642018 FKBP8Q14318 412 aa13.5□□□□□ -0.25
CASC19-274ENST00000642018 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
CASC19-274ENST00000642018 FBLN2P98095 1184 aa13.43□□□□□ -0.26
CASC19-274ENST00000642018 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
CASC19-274ENST00000642018 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
CASC19-274ENST00000642018 POLA2Q14181 598 aa13.37□□□□□ -0.27
CASC19-274ENST00000642018 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
CASC19-274ENST00000642018 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
CASC19-274ENST00000642018 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
CASC19-274ENST00000642018 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
CASC19-274ENST00000642018 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
CASC19-274ENST00000642018 ABCB7O75027 752 aa13.25□□□□□ -0.29
CASC19-274ENST00000642018 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
CASC19-274ENST00000642018 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
CASC19-274ENST00000642018 DSG3P32926 999 aa13.13□□□□□ -0.31
CASC19-274ENST00000642018 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
CASC19-274ENST00000642018 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
CASC19-274ENST00000642018 CUX2O14529 1486 aa12.97□□□□□ -0.33
CASC19-274ENST00000642018 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
CASC19-274ENST00000642018 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
CASC19-274ENST00000642018 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
CASC19-274ENST00000642018 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
CASC19-274ENST00000642018 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
CASC19-274ENST00000642018 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
CASC19-274ENST00000642018 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
CASC19-274ENST00000642018 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
CASC19-274ENST00000642018 POTEHQ6S545 545 aa12.85□□□□□ -0.35
CASC19-274ENST00000642018 PROM2Q8N271 834 aa12.85□□□□□ -0.35
CASC19-274ENST00000642018 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
CASC19-274ENST00000642018 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
CASC19-274ENST00000642018 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
CASC19-274ENST00000642018 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
CASC19-274ENST00000642018 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
CASC19-274ENST00000642018 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
CASC19-274ENST00000642018 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
CASC19-274ENST00000642018 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
CASC19-274ENST00000642018 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
CASC19-274ENST00000642018 NESP48681 1621 aa12.61□□□□□ -0.39
CASC19-274ENST00000642018 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
CASC19-274ENST00000642018 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
CASC19-274ENST00000642018 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
CASC19-274ENST00000642018 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
CASC19-274ENST00000642018 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
CASC19-274ENST00000642018 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
CASC19-274ENST00000642018 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms