RNA–Protein interactions for RNA: ENST00000642018.1

CASC19-274, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 970 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-274ENST00000642018 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
CASC19-274ENST00000642018 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
CASC19-274ENST00000642018 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
CASC19-274ENST00000642018 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
CASC19-274ENST00000642018 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
CASC19-274ENST00000642018 FOXD1Q16676 465 aa17.37■□□□□ 0.37
CASC19-274ENST00000642018 ADRA2BP18089 450 aa16.97■□□□□ 0.31
CASC19-274ENST00000642018 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
CASC19-274ENST00000642018 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
CASC19-274ENST00000642018 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
CASC19-274ENST00000642018 MSH5O43196 834 aa16.34■□□□□ 0.21
CASC19-274ENST00000642018 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
CASC19-274ENST00000642018 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
CASC19-274ENST00000642018 KCNA4P22459 653 aa15.9■□□□□ 0.14
CASC19-274ENST00000642018 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
CASC19-274ENST00000642018 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
CASC19-274ENST00000642018 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
CASC19-274ENST00000642018 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
CASC19-274ENST00000642018 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
CASC19-274ENST00000642018 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
CASC19-274ENST00000642018 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
CASC19-274ENST00000642018 RNF216Q9NWF9 866 aaPredicted RBP15.1■□□□□ 0.01
CASC19-274ENST00000642018 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
CASC19-274ENST00000642018 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
CASC19-274ENST00000642018 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
CASC19-274ENST00000642018 ABCC9O60706 1549 aa14.82□□□□□ -0.04
CASC19-274ENST00000642018 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
CASC19-274ENST00000642018 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
CASC19-274ENST00000642018 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
CASC19-274ENST00000642018 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
CASC19-274ENST00000642018 ZBTB22O15209 634 aa14.52□□□□□ -0.09
CASC19-274ENST00000642018 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
CASC19-274ENST00000642018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
CASC19-274ENST00000642018 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
CASC19-274ENST00000642018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
CASC19-274ENST00000642018 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
CASC19-274ENST00000642018 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
CASC19-274ENST00000642018 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
CASC19-274ENST00000642018 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
CASC19-274ENST00000642018 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
CASC19-274ENST00000642018 APLP2Q06481 763 aa14.04□□□□□ -0.16
CASC19-274ENST00000642018 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
CASC19-274ENST00000642018 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
CASC19-274ENST00000642018 NACADO15069 1562 aa13.92□□□□□ -0.18
CASC19-274ENST00000642018 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
CASC19-274ENST00000642018 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
CASC19-274ENST00000642018 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
CASC19-274ENST00000642018 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
CASC19-274ENST00000642018 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
CASC19-274ENST00000642018 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
CASC19-274ENST00000642018 UNC13AQ9UPW8 1703 aa13.6□□□□□ -0.23
CASC19-274ENST00000642018 CAPN15O75808 1086 aa13.58□□□□□ -0.24
CASC19-274ENST00000642018 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
CASC19-274ENST00000642018 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
CASC19-274ENST00000642018 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.25
CASC19-274ENST00000642018 FKBP8Q14318 412 aa13.5□□□□□ -0.25
CASC19-274ENST00000642018 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
CASC19-274ENST00000642018 FBLN2P98095 1184 aa13.43□□□□□ -0.26
CASC19-274ENST00000642018 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
CASC19-274ENST00000642018 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
CASC19-274ENST00000642018 POLA2Q14181 598 aa13.37□□□□□ -0.27
CASC19-274ENST00000642018 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
CASC19-274ENST00000642018 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
CASC19-274ENST00000642018 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
CASC19-274ENST00000642018 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
CASC19-274ENST00000642018 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
CASC19-274ENST00000642018 ABCB7O75027 752 aa13.25□□□□□ -0.29
CASC19-274ENST00000642018 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
CASC19-274ENST00000642018 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
CASC19-274ENST00000642018 DSG3P32926 999 aa13.13□□□□□ -0.31
CASC19-274ENST00000642018 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
CASC19-274ENST00000642018 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
CASC19-274ENST00000642018 CUX2O14529 1486 aa12.97□□□□□ -0.33
CASC19-274ENST00000642018 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
CASC19-274ENST00000642018 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
CASC19-274ENST00000642018 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
CASC19-274ENST00000642018 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
CASC19-274ENST00000642018 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
CASC19-274ENST00000642018 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
CASC19-274ENST00000642018 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
CASC19-274ENST00000642018 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
CASC19-274ENST00000642018 POTEHQ6S545 545 aa12.85□□□□□ -0.35
CASC19-274ENST00000642018 PROM2Q8N271 834 aa12.85□□□□□ -0.35
CASC19-274ENST00000642018 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
CASC19-274ENST00000642018 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
CASC19-274ENST00000642018 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
CASC19-274ENST00000642018 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
CASC19-274ENST00000642018 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
CASC19-274ENST00000642018 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
CASC19-274ENST00000642018 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
CASC19-274ENST00000642018 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
CASC19-274ENST00000642018 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
CASC19-274ENST00000642018 NESP48681 1621 aa12.61□□□□□ -0.39
CASC19-274ENST00000642018 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
CASC19-274ENST00000642018 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
CASC19-274ENST00000642018 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
CASC19-274ENST00000642018 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
CASC19-274ENST00000642018 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
CASC19-274ENST00000642018 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
CASC19-274ENST00000642018 BAZ1AQ9NRL2 1556 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms