RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 AEBP2Q6ZN18 517 aaPredicted RBP29.43■■■□□ 2.3
CASC19-248ENST00000641674 CHIC1Q5VXU3 224 aa27.63■■■□□ 2.01
CASC19-248ENST00000641674 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
CASC19-248ENST00000641674 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
CASC19-248ENST00000641674 FOXD1Q16676 465 aa23.44■■□□□ 1.34
CASC19-248ENST00000641674 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
CASC19-248ENST00000641674 MSH5O43196 834 aa21.91■■□□□ 1.1
CASC19-248ENST00000641674 POTEDQ86YR6 584 aa21.9■■□□□ 1.1
CASC19-248ENST00000641674 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
CASC19-248ENST00000641674 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
CASC19-248ENST00000641674 ADRA2BP18089 450 aa21.7■■□□□ 1.06
CASC19-248ENST00000641674 MAPK8IP2Q13387 824 aaPredicted RBP20.02■□□□□ 0.8
CASC19-248ENST00000641674 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.76
CASC19-248ENST00000641674 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
CASC19-248ENST00000641674 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
CASC19-248ENST00000641674 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
CASC19-248ENST00000641674 CACNB1Q02641 598 aaPredicted RBP19.02■□□□□ 0.64
CASC19-248ENST00000641674 HOXD11P31277 338 aaPredicted RBP18.99■□□□□ 0.63
CASC19-248ENST00000641674 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
CASC19-248ENST00000641674 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
CASC19-248ENST00000641674 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
CASC19-248ENST00000641674 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
CASC19-248ENST00000641674 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
CASC19-248ENST00000641674 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
CASC19-248ENST00000641674 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
CASC19-248ENST00000641674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
CASC19-248ENST00000641674 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
CASC19-248ENST00000641674 KCNA4P22459 653 aa17.66■□□□□ 0.42
CASC19-248ENST00000641674 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
CASC19-248ENST00000641674 CAPN15O75808 1086 aa17.53■□□□□ 0.4
CASC19-248ENST00000641674 DSG3P32926 999 aa17.48■□□□□ 0.39
CASC19-248ENST00000641674 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
CASC19-248ENST00000641674 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
CASC19-248ENST00000641674 ABCB7O75027 752 aa17.17■□□□□ 0.34
CASC19-248ENST00000641674 POTEHQ6S545 545 aa17.09■□□□□ 0.33
CASC19-248ENST00000641674 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
CASC19-248ENST00000641674 APLP2Q06481 763 aa17.06■□□□□ 0.32
CASC19-248ENST00000641674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
CASC19-248ENST00000641674 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
CASC19-248ENST00000641674 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
CASC19-248ENST00000641674 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.27
CASC19-248ENST00000641674 POLA2Q14181 598 aa16.68■□□□□ 0.26
CASC19-248ENST00000641674 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
CASC19-248ENST00000641674 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
CASC19-248ENST00000641674 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
CASC19-248ENST00000641674 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
CASC19-248ENST00000641674 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
CASC19-248ENST00000641674 ZBTB22O15209 634 aa16.27■□□□□ 0.2
CASC19-248ENST00000641674 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
CASC19-248ENST00000641674 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
CASC19-248ENST00000641674 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
CASC19-248ENST00000641674 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
CASC19-248ENST00000641674 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
CASC19-248ENST00000641674 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
CASC19-248ENST00000641674 ATXN8OSP0DMR3 200 aa15.93■□□□□ 0.14
CASC19-248ENST00000641674 SP7Q8TDD2 431 aaPredicted RBP15.89■□□□□ 0.13
CASC19-248ENST00000641674 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
CASC19-248ENST00000641674 FBLN2P98095 1184 aa15.76■□□□□ 0.11
CASC19-248ENST00000641674 HAX1O00165 279 aa15.75■□□□□ 0.11
CASC19-248ENST00000641674 SPDYE2BA6NHP3 402 aa15.74■□□□□ 0.11
CASC19-248ENST00000641674 SPDYE6P0CI01 402 aa15.74■□□□□ 0.11
CASC19-248ENST00000641674 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
CASC19-248ENST00000641674 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
CASC19-248ENST00000641674 EVX2Q03828 476 aa15.62■□□□□ 0.09
CASC19-248ENST00000641674 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
CASC19-248ENST00000641674 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
CASC19-248ENST00000641674 SSUH2Q9Y2M2 353 aa15.53■□□□□ 0.08
CASC19-248ENST00000641674 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.08
CASC19-248ENST00000641674 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
CASC19-248ENST00000641674 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
CASC19-248ENST00000641674 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
CASC19-248ENST00000641674 C19orf67A6NJJ6 358 aa15.33■□□□□ 0.04
CASC19-248ENST00000641674 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
CASC19-248ENST00000641674 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
CASC19-248ENST00000641674 GABBR2O75899 941 aa15.19■□□□□ 0.02
CASC19-248ENST00000641674 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
CASC19-248ENST00000641674 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
CASC19-248ENST00000641674 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
CASC19-248ENST00000641674 LHX8Q68G74 356 aa14.92□□□□□ -0.02
CASC19-248ENST00000641674 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
CASC19-248ENST00000641674 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
CASC19-248ENST00000641674 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
CASC19-248ENST00000641674 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
CASC19-248ENST00000641674 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.04
CASC19-248ENST00000641674 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
CASC19-248ENST00000641674 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
CASC19-248ENST00000641674 CLCN6P51797 869 aa14.69□□□□□ -0.06
CASC19-248ENST00000641674 GALR2O43603 387 aaPredicted RBP14.65□□□□□ -0.06
CASC19-248ENST00000641674 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
CASC19-248ENST00000641674 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
CASC19-248ENST00000641674 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.08
CASC19-248ENST00000641674 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
CASC19-248ENST00000641674 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
CASC19-248ENST00000641674 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
CASC19-248ENST00000641674 PROM2Q8N271 834 aa14.38□□□□□ -0.11
CASC19-248ENST00000641674 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
CASC19-248ENST00000641674 MS4A3Q96HJ5 214 aa14.36□□□□□ -0.11
CASC19-248ENST00000641674 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
CASC19-248ENST00000641674 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
CASC19-248ENST00000641674 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms