RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 AEBP2Q6ZN18 517 aaPredicted RBP34.2■■■■□ 3.07
CASC19-240ENST00000641578 CHIC1Q5VXU3 224 aa31.87■■■□□ 2.69
CASC19-240ENST00000641578 SENP3Q9H4L4 574 aaPredicted RBP29.2■■■□□ 2.26
CASC19-240ENST00000641578 PHF23Q9BUL5 403 aaPredicted RBP28.76■■■□□ 2.19
CASC19-240ENST00000641578 FOXD1Q16676 465 aa27.33■■□□□ 1.97
CASC19-240ENST00000641578 POTEDQ86YR6 584 aa26.23■■□□□ 1.79
CASC19-240ENST00000641578 MSH5O43196 834 aa25.76■■□□□ 1.71
CASC19-240ENST00000641578 PIAS4Q8N2W9 510 aaPredicted RBP25.36■■□□□ 1.65
CASC19-240ENST00000641578 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
CASC19-240ENST00000641578 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
CASC19-240ENST00000641578 ADRA2BP18089 450 aa24.97■■□□□ 1.59
CASC19-240ENST00000641578 MAPK8IP2Q13387 824 aaPredicted RBP23.14■■□□□ 1.29
CASC19-240ENST00000641578 DMRT2Q9Y5R5 561 aa23.08■■□□□ 1.29
CASC19-240ENST00000641578 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
CASC19-240ENST00000641578 CACNB1Q02641 598 aaPredicted RBP22.48■■□□□ 1.19
CASC19-240ENST00000641578 DCAF8L1A6NGE4 600 aa22.12■■□□□ 1.13
CASC19-240ENST00000641578 HOXD11P31277 338 aaPredicted RBP22■■□□□ 1.11
CASC19-240ENST00000641578 PPP4R3CPQ6ZMV5 832 aa21.97■■□□□ 1.11
CASC19-240ENST00000641578 RNF39Q9H2S5 420 aa21.97■■□□□ 1.11
CASC19-240ENST00000641578 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
CASC19-240ENST00000641578 RNF216Q9NWF9 866 aaPredicted RBP21.66■■□□□ 1.06
CASC19-240ENST00000641578 C1QBPQ07021 282 aaKnown RBP21.58■■□□□ 1.05
CASC19-240ENST00000641578 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
CASC19-240ENST00000641578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.94
CASC19-240ENST00000641578 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
CASC19-240ENST00000641578 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
CASC19-240ENST00000641578 U3KPZ7 1027 aaPredicted RBP20.45■□□□□ 0.86
CASC19-240ENST00000641578 POTEHQ6S545 545 aa20.42■□□□□ 0.86
CASC19-240ENST00000641578 DSG3P32926 999 aa20.36■□□□□ 0.85
CASC19-240ENST00000641578 SPINK5Q9NQ38 1064 aaPredicted RBP20.35■□□□□ 0.85
CASC19-240ENST00000641578 CAPN15O75808 1086 aa20.3■□□□□ 0.84
CASC19-240ENST00000641578 SLC4A2P04920 1241 aa19.91■□□□□ 0.78
CASC19-240ENST00000641578 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
CASC19-240ENST00000641578 ABCB7O75027 752 aa19.8■□□□□ 0.76
CASC19-240ENST00000641578 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
CASC19-240ENST00000641578 APLP2Q06481 763 aa19.73■□□□□ 0.75
CASC19-240ENST00000641578 KCNA4P22459 653 aa19.72■□□□□ 0.75
CASC19-240ENST00000641578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
CASC19-240ENST00000641578 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
CASC19-240ENST00000641578 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
CASC19-240ENST00000641578 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
CASC19-240ENST00000641578 CHRDL2Q6WN34 429 aa19.24■□□□□ 0.67
CASC19-240ENST00000641578 POLA2Q14181 598 aa19.18■□□□□ 0.66
CASC19-240ENST00000641578 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.64
CASC19-240ENST00000641578 SP7Q8TDD2 431 aaPredicted RBP18.86■□□□□ 0.61
CASC19-240ENST00000641578 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
CASC19-240ENST00000641578 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
CASC19-240ENST00000641578 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
CASC19-240ENST00000641578 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
CASC19-240ENST00000641578 PIP4P2Q8N4L2 257 aa18.67■□□□□ 0.58
CASC19-240ENST00000641578 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
CASC19-240ENST00000641578 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
CASC19-240ENST00000641578 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
CASC19-240ENST00000641578 HAX1O00165 279 aa18.47■□□□□ 0.55
CASC19-240ENST00000641578 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
CASC19-240ENST00000641578 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
CASC19-240ENST00000641578 EVX2Q03828 476 aa18.26■□□□□ 0.51
CASC19-240ENST00000641578 ZBTB22O15209 634 aa18.16■□□□□ 0.5
CASC19-240ENST00000641578 SPDYE2BA6NHP3 402 aa18.09■□□□□ 0.49
CASC19-240ENST00000641578 SPDYE6P0CI01 402 aa18.09■□□□□ 0.49
CASC19-240ENST00000641578 SPDYE2Q495Y8 402 aa18.09■□□□□ 0.49
CASC19-240ENST00000641578 ATXN8OSP0DMR3 200 aa18.04■□□□□ 0.48
CASC19-240ENST00000641578 PRKAR2AP13861 404 aaKnown RBP18■□□□□ 0.47
CASC19-240ENST00000641578 FBLN2P98095 1184 aa17.97■□□□□ 0.47
CASC19-240ENST00000641578 CLEC11AQ9Y240 323 aa17.92■□□□□ 0.46
CASC19-240ENST00000641578 SPDYE1Q8NFV5 336 aaPredicted RBP17.91■□□□□ 0.46
CASC19-240ENST00000641578 C19orf67A6NJJ6 358 aa17.89■□□□□ 0.45
CASC19-240ENST00000641578 MKRN4PQ13434 485 aaPredicted RBP17.86■□□□□ 0.45
CASC19-240ENST00000641578 SSUH2Q9Y2M2 353 aa17.82■□□□□ 0.44
CASC19-240ENST00000641578 GABBR2O75899 941 aa17.78■□□□□ 0.44
CASC19-240ENST00000641578 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
CASC19-240ENST00000641578 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
CASC19-240ENST00000641578 LHX8Q68G74 356 aa17.67■□□□□ 0.42
CASC19-240ENST00000641578 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
CASC19-240ENST00000641578 PRR29P0C7W0 189 aa17.54■□□□□ 0.4
CASC19-240ENST00000641578 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
CASC19-240ENST00000641578 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
CASC19-240ENST00000641578 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
CASC19-240ENST00000641578 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
CASC19-240ENST00000641578 CLCN6P51797 869 aa17.24■□□□□ 0.35
CASC19-240ENST00000641578 DCBLD2Q96PD2 775 aa17.13■□□□□ 0.33
CASC19-240ENST00000641578 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
CASC19-240ENST00000641578 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
CASC19-240ENST00000641578 PLSCR2Q9NRY7 297 aa17.01■□□□□ 0.31
CASC19-240ENST00000641578 CREBZFQ9NS37 354 aa17■□□□□ 0.31
CASC19-240ENST00000641578 GALR2O43603 387 aaPredicted RBP16.95■□□□□ 0.3
CASC19-240ENST00000641578 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
CASC19-240ENST00000641578 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
CASC19-240ENST00000641578 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
CASC19-240ENST00000641578 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
CASC19-240ENST00000641578 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
CASC19-240ENST00000641578 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
CASC19-240ENST00000641578 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
CASC19-240ENST00000641578 POTEMA6NI47 508 aa16.67■□□□□ 0.26
CASC19-240ENST00000641578 MNX1P50219 401 aaPredicted RBP16.66■□□□□ 0.26
CASC19-240ENST00000641578 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
CASC19-240ENST00000641578 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
CASC19-240ENST00000641578 POTEGQ6S5H5 508 aa16.6■□□□□ 0.25
CASC19-240ENST00000641578 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
CASC19-240ENST00000641578 MS4A3Q96HJ5 214 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms