RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-255ENST00000641733 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
CASC19-255ENST00000641733 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
CASC19-255ENST00000641733 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.02
CASC19-255ENST00000641733 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
CASC19-255ENST00000641733 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
CASC19-255ENST00000641733 FOXD1Q16676 465 aa19.68■□□□□ 0.74
CASC19-255ENST00000641733 ADRA2BP18089 450 aa18.88■□□□□ 0.61
CASC19-255ENST00000641733 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
CASC19-255ENST00000641733 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
CASC19-255ENST00000641733 MSH5O43196 834 aa18.27■□□□□ 0.51
CASC19-255ENST00000641733 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
CASC19-255ENST00000641733 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CASC19-255ENST00000641733 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
CASC19-255ENST00000641733 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
CASC19-255ENST00000641733 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
CASC19-255ENST00000641733 KCNA4P22459 653 aa16.97■□□□□ 0.31
CASC19-255ENST00000641733 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
CASC19-255ENST00000641733 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
CASC19-255ENST00000641733 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
CASC19-255ENST00000641733 HOXD11P31277 338 aaPredicted RBP16.6■□□□□ 0.25
CASC19-255ENST00000641733 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
CASC19-255ENST00000641733 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
CASC19-255ENST00000641733 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
CASC19-255ENST00000641733 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
CASC19-255ENST00000641733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
CASC19-255ENST00000641733 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
CASC19-255ENST00000641733 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
CASC19-255ENST00000641733 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
CASC19-255ENST00000641733 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
CASC19-255ENST00000641733 ZBTB22O15209 634 aa15.57■□□□□ 0.08
CASC19-255ENST00000641733 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
CASC19-255ENST00000641733 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
CASC19-255ENST00000641733 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
CASC19-255ENST00000641733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
CASC19-255ENST00000641733 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
CASC19-255ENST00000641733 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
CASC19-255ENST00000641733 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
CASC19-255ENST00000641733 APLP2Q06481 763 aa15.33■□□□□ 0.04
CASC19-255ENST00000641733 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
CASC19-255ENST00000641733 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
CASC19-255ENST00000641733 CAPN15O75808 1086 aa15.09■□□□□ 0.01
CASC19-255ENST00000641733 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
CASC19-255ENST00000641733 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
CASC19-255ENST00000641733 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
CASC19-255ENST00000641733 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
CASC19-255ENST00000641733 DSG3P32926 999 aa14.82□□□□□ -0.04
CASC19-255ENST00000641733 ABCB7O75027 752 aa14.75□□□□□ -0.05
CASC19-255ENST00000641733 POLA2Q14181 598 aa14.73□□□□□ -0.05
CASC19-255ENST00000641733 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
CASC19-255ENST00000641733 FBLN2P98095 1184 aa14.5□□□□□ -0.09
CASC19-255ENST00000641733 MKRN4PQ13434 485 aaPredicted RBP14.34□□□□□ -0.11
CASC19-255ENST00000641733 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
CASC19-255ENST00000641733 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
CASC19-255ENST00000641733 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
CASC19-255ENST00000641733 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
CASC19-255ENST00000641733 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
CASC19-255ENST00000641733 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
CASC19-255ENST00000641733 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
CASC19-255ENST00000641733 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
CASC19-255ENST00000641733 FKBP8Q14318 412 aa14.05□□□□□ -0.16
CASC19-255ENST00000641733 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
CASC19-255ENST00000641733 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
CASC19-255ENST00000641733 PABPN1Q86U42 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
CASC19-255ENST00000641733 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
CASC19-255ENST00000641733 PROM2Q8N271 834 aa13.82□□□□□ -0.2
CASC19-255ENST00000641733 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
CASC19-255ENST00000641733 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.21
CASC19-255ENST00000641733 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
CASC19-255ENST00000641733 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
CASC19-255ENST00000641733 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
CASC19-255ENST00000641733 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
CASC19-255ENST00000641733 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
CASC19-255ENST00000641733 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
CASC19-255ENST00000641733 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
CASC19-255ENST00000641733 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
CASC19-255ENST00000641733 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
CASC19-255ENST00000641733 VASPP50552 380 aaPredicted RBP13.4□□□□□ -0.26
CASC19-255ENST00000641733 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
CASC19-255ENST00000641733 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
CASC19-255ENST00000641733 MIER1Q8N108 512 aa13.36□□□□□ -0.27
CASC19-255ENST00000641733 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
CASC19-255ENST00000641733 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
CASC19-255ENST00000641733 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
CASC19-255ENST00000641733 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
CASC19-255ENST00000641733 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
CASC19-255ENST00000641733 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
CASC19-255ENST00000641733 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
CASC19-255ENST00000641733 POTEHQ6S545 545 aa13.17□□□□□ -0.3
CASC19-255ENST00000641733 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
CASC19-255ENST00000641733 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
CASC19-255ENST00000641733 SPOCK2Q92563 424 aa13.07□□□□□ -0.32
CASC19-255ENST00000641733 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CASC19-255ENST00000641733 NUBP1P53384 320 aa12.98□□□□□ -0.33
CASC19-255ENST00000641733 HAX1O00165 279 aa12.97□□□□□ -0.33
CASC19-255ENST00000641733 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
CASC19-255ENST00000641733 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
CASC19-255ENST00000641733 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
CASC19-255ENST00000641733 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
CASC19-255ENST00000641733 GSE1Q14687 1217 aa12.92□□□□□ -0.34
CASC19-255ENST00000641733 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms