RNA–Protein interactions for RNA: ENST00000641309.1

CASC19-221, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,382 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-221ENST00000641309 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
CASC19-221ENST00000641309 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
CASC19-221ENST00000641309 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
CASC19-221ENST00000641309 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
CASC19-221ENST00000641309 FOXD1Q16676 465 aa15.78■□□□□ 0.12
CASC19-221ENST00000641309 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
CASC19-221ENST00000641309 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
CASC19-221ENST00000641309 MSH5O43196 834 aa15.08■□□□□ 0
CASC19-221ENST00000641309 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
CASC19-221ENST00000641309 ADRA2BP18089 450 aa14.66□□□□□ -0.06
CASC19-221ENST00000641309 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
CASC19-221ENST00000641309 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
CASC19-221ENST00000641309 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
CASC19-221ENST00000641309 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
CASC19-221ENST00000641309 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
CASC19-221ENST00000641309 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
CASC19-221ENST00000641309 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
CASC19-221ENST00000641309 KCNA4P22459 653 aa13.14□□□□□ -0.31
CASC19-221ENST00000641309 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
CASC19-221ENST00000641309 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
CASC19-221ENST00000641309 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
CASC19-221ENST00000641309 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
CASC19-221ENST00000641309 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
CASC19-221ENST00000641309 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
CASC19-221ENST00000641309 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
CASC19-221ENST00000641309 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
CASC19-221ENST00000641309 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
CASC19-221ENST00000641309 NISCHQ9Y2I1 1504 aa12.44□□□□□ -0.42
CASC19-221ENST00000641309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
CASC19-221ENST00000641309 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
CASC19-221ENST00000641309 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
CASC19-221ENST00000641309 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
CASC19-221ENST00000641309 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
CASC19-221ENST00000641309 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
CASC19-221ENST00000641309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
CASC19-221ENST00000641309 ZBTB22O15209 634 aa12.02□□□□□ -0.49
CASC19-221ENST00000641309 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
CASC19-221ENST00000641309 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
CASC19-221ENST00000641309 APLP2Q06481 763 aa11.93□□□□□ -0.5
CASC19-221ENST00000641309 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
CASC19-221ENST00000641309 POTEHQ6S545 545 aa11.92□□□□□ -0.5
CASC19-221ENST00000641309 CAPN15O75808 1086 aa11.8□□□□□ -0.52
CASC19-221ENST00000641309 DSG3P32926 999 aa11.8□□□□□ -0.52
CASC19-221ENST00000641309 ATXN8OSP0DMR3 200 aa11.78□□□□□ -0.52
CASC19-221ENST00000641309 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
CASC19-221ENST00000641309 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
CASC19-221ENST00000641309 TRHP20396 242 aaPredicted RBP11.67□□□□□ -0.54
CASC19-221ENST00000641309 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
CASC19-221ENST00000641309 ABCC9O60706 1549 aa11.49□□□□□ -0.57
CASC19-221ENST00000641309 ABCB7O75027 752 aa11.46□□□□□ -0.57
CASC19-221ENST00000641309 POLA2Q14181 598 aa11.46□□□□□ -0.57
CASC19-221ENST00000641309 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
CASC19-221ENST00000641309 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
CASC19-221ENST00000641309 FBLN2P98095 1184 aa11.28□□□□□ -0.6
CASC19-221ENST00000641309 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
CASC19-221ENST00000641309 CCDC180Q9P1Z9 1646 aa11.16□□□□□ -0.62
CASC19-221ENST00000641309 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
CASC19-221ENST00000641309 AKT1S1Q96B36 256 aa11.04□□□□□ -0.64
CASC19-221ENST00000641309 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
CASC19-221ENST00000641309 SPDYE2BA6NHP3 402 aa11□□□□□ -0.65
CASC19-221ENST00000641309 SPDYE6P0CI01 402 aa11□□□□□ -0.65
CASC19-221ENST00000641309 SPDYE2Q495Y8 402 aa11□□□□□ -0.65
CASC19-221ENST00000641309 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
CASC19-221ENST00000641309 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
CASC19-221ENST00000641309 SPDYE4A6NLX3 237 aa10.93□□□□□ -0.66
CASC19-221ENST00000641309 FKBP8Q14318 412 aa10.9□□□□□ -0.67
CASC19-221ENST00000641309 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
CASC19-221ENST00000641309 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
CASC19-221ENST00000641309 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
CASC19-221ENST00000641309 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
CASC19-221ENST00000641309 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.68
CASC19-221ENST00000641309 RB1CC1Q8TDY2 1594 aa10.75□□□□□ -0.69
CASC19-221ENST00000641309 HAX1O00165 279 aa10.75□□□□□ -0.69
CASC19-221ENST00000641309 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
CASC19-221ENST00000641309 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
CASC19-221ENST00000641309 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
CASC19-221ENST00000641309 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
CASC19-221ENST00000641309 PROM2Q8N271 834 aa10.66□□□□□ -0.7
CASC19-221ENST00000641309 CLEC11AQ9Y240 323 aa10.65□□□□□ -0.71
CASC19-221ENST00000641309 FBXO3Q9UK99 471 aa10.61□□□□□ -0.71
CASC19-221ENST00000641309 NACADO15069 1562 aa10.6□□□□□ -0.71
CASC19-221ENST00000641309 UNC13AQ9UPW8 1703 aa10.6□□□□□ -0.71
CASC19-221ENST00000641309 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
CASC19-221ENST00000641309 EVX2Q03828 476 aa10.5□□□□□ -0.73
CASC19-221ENST00000641309 BICRAQ9NZM4 1560 aa10.46□□□□□ -0.73
CASC19-221ENST00000641309 PLEKHG5O94827 1062 aa10.46□□□□□ -0.74
CASC19-221ENST00000641309 PRKAR2AP13861 404 aaKnown RBP10.45□□□□□ -0.74
CASC19-221ENST00000641309 MIER1Q8N108 512 aa10.42□□□□□ -0.74
CASC19-221ENST00000641309 PLCD3Q8N3E9 789 aa10.4□□□□□ -0.74
CASC19-221ENST00000641309 C19orf67A6NJJ6 358 aa10.39□□□□□ -0.75
CASC19-221ENST00000641309 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
CASC19-221ENST00000641309 ZBTB47Q9UFB7 747 aaPredicted RBP10.34□□□□□ -0.75
CASC19-221ENST00000641309 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
CASC19-221ENST00000641309 SCRIBQ14160 1630 aa10.32□□□□□ -0.76
CASC19-221ENST00000641309 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
CASC19-221ENST00000641309 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
CASC19-221ENST00000641309 CECR2Q9BXF3 1484 aa10.31□□□□□ -0.76
CASC19-221ENST00000641309 CLCN6P51797 869 aa10.3□□□□□ -0.76
CASC19-221ENST00000641309 GABBR2O75899 941 aa10.29□□□□□ -0.76
CASC19-221ENST00000641309 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms