RNA–Protein interactions for RNA: ENST00000641298.1

CASC19-220, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 974 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-220ENST00000641298 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
CASC19-220ENST00000641298 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
CASC19-220ENST00000641298 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
CASC19-220ENST00000641298 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
CASC19-220ENST00000641298 FOXD1Q16676 465 aa25.35■■□□□ 1.65
CASC19-220ENST00000641298 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
CASC19-220ENST00000641298 MSH5O43196 834 aa23.73■■□□□ 1.39
CASC19-220ENST00000641298 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
CASC19-220ENST00000641298 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
CASC19-220ENST00000641298 POTEDQ86YR6 584 aa23.56■■□□□ 1.36
CASC19-220ENST00000641298 ADRA2BP18089 450 aa23.54■■□□□ 1.36
CASC19-220ENST00000641298 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
CASC19-220ENST00000641298 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CASC19-220ENST00000641298 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
CASC19-220ENST00000641298 PPP4R3CPQ6ZMV5 832 aa21.12■□□□□ 0.97
CASC19-220ENST00000641298 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
CASC19-220ENST00000641298 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
CASC19-220ENST00000641298 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
CASC19-220ENST00000641298 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
CASC19-220ENST00000641298 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
CASC19-220ENST00000641298 RNF39Q9H2S5 420 aa20.28■□□□□ 0.84
CASC19-220ENST00000641298 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
CASC19-220ENST00000641298 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
CASC19-220ENST00000641298 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
CASC19-220ENST00000641298 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
CASC19-220ENST00000641298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
CASC19-220ENST00000641298 KCNA4P22459 653 aa19.59■□□□□ 0.73
CASC19-220ENST00000641298 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
CASC19-220ENST00000641298 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
CASC19-220ENST00000641298 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
CASC19-220ENST00000641298 CAPN15O75808 1086 aa18.95■□□□□ 0.62
CASC19-220ENST00000641298 DSG3P32926 999 aa18.95■□□□□ 0.62
CASC19-220ENST00000641298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.77■□□□□ 0.6
CASC19-220ENST00000641298 APLP2Q06481 763 aa18.77■□□□□ 0.6
CASC19-220ENST00000641298 HNRNPUL2Q1KMD3 747 aaKnown RBP18.77■□□□□ 0.6
CASC19-220ENST00000641298 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
CASC19-220ENST00000641298 SAMD1Q6SPF0 538 aaPredicted RBP18.66■□□□□ 0.58
CASC19-220ENST00000641298 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
CASC19-220ENST00000641298 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
CASC19-220ENST00000641298 ABCB7O75027 752 aa18.51■□□□□ 0.55
CASC19-220ENST00000641298 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
CASC19-220ENST00000641298 POTEHQ6S545 545 aa18.37■□□□□ 0.53
CASC19-220ENST00000641298 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
CASC19-220ENST00000641298 POLA2Q14181 598 aa18.17■□□□□ 0.5
CASC19-220ENST00000641298 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
CASC19-220ENST00000641298 RBM42Q9BTD8 480 aaKnown RBP18.07■□□□□ 0.48
CASC19-220ENST00000641298 ZBTB22O15209 634 aa18.05■□□□□ 0.48
CASC19-220ENST00000641298 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
CASC19-220ENST00000641298 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
CASC19-220ENST00000641298 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
CASC19-220ENST00000641298 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
CASC19-220ENST00000641298 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
CASC19-220ENST00000641298 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
CASC19-220ENST00000641298 FBLN2P98095 1184 aa17.33■□□□□ 0.36
CASC19-220ENST00000641298 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
CASC19-220ENST00000641298 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
CASC19-220ENST00000641298 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
CASC19-220ENST00000641298 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
CASC19-220ENST00000641298 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CASC19-220ENST00000641298 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
CASC19-220ENST00000641298 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
CASC19-220ENST00000641298 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
CASC19-220ENST00000641298 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
CASC19-220ENST00000641298 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
CASC19-220ENST00000641298 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
CASC19-220ENST00000641298 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
CASC19-220ENST00000641298 HAX1O00165 279 aa16.87■□□□□ 0.29
CASC19-220ENST00000641298 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
CASC19-220ENST00000641298 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
CASC19-220ENST00000641298 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
CASC19-220ENST00000641298 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
CASC19-220ENST00000641298 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
CASC19-220ENST00000641298 EVX2Q03828 476 aa16.74■□□□□ 0.27
CASC19-220ENST00000641298 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
CASC19-220ENST00000641298 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
CASC19-220ENST00000641298 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
CASC19-220ENST00000641298 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
CASC19-220ENST00000641298 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
CASC19-220ENST00000641298 GABBR2O75899 941 aa16.35■□□□□ 0.21
CASC19-220ENST00000641298 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
CASC19-220ENST00000641298 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
CASC19-220ENST00000641298 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
CASC19-220ENST00000641298 CLCN6P51797 869 aa16.15■□□□□ 0.18
CASC19-220ENST00000641298 PROM2Q8N271 834 aa16.14■□□□□ 0.17
CASC19-220ENST00000641298 ZNF579Q8NAF0 562 aaKnown RBP16.09■□□□□ 0.17
CASC19-220ENST00000641298 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
CASC19-220ENST00000641298 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CASC19-220ENST00000641298 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
CASC19-220ENST00000641298 LHX8Q68G74 356 aa15.94■□□□□ 0.14
CASC19-220ENST00000641298 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
CASC19-220ENST00000641298 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
CASC19-220ENST00000641298 GALR2O43603 387 aaPredicted RBP15.85■□□□□ 0.13
CASC19-220ENST00000641298 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
CASC19-220ENST00000641298 PHF12Q96QT6 1004 aa15.8■□□□□ 0.12
CASC19-220ENST00000641298 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
CASC19-220ENST00000641298 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
CASC19-220ENST00000641298 MIER1Q8N108 512 aa15.58■□□□□ 0.08
CASC19-220ENST00000641298 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
CASC19-220ENST00000641298 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
CASC19-220ENST00000641298 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms