RNA–Protein interactions for RNA: ENST00000641934.1

CASC19-266, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-266ENST00000641934 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
CASC19-266ENST00000641934 CCDC180Q9P1Z9 1646 aa16.71■□□□□ 0.27
CASC19-266ENST00000641934 ABCC9O60706 1549 aa16.19■□□□□ 0.18
CASC19-266ENST00000641934 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
CASC19-266ENST00000641934 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
CASC19-266ENST00000641934 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
CASC19-266ENST00000641934 NACADO15069 1562 aa15.72■□□□□ 0.11
CASC19-266ENST00000641934 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
CASC19-266ENST00000641934 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
CASC19-266ENST00000641934 ZCCHC6Q5VYS8 1495 aaKnown RBP15.36■□□□□ 0.05
CASC19-266ENST00000641934 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
CASC19-266ENST00000641934 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
CASC19-266ENST00000641934 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
CASC19-266ENST00000641934 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
CASC19-266ENST00000641934 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
CASC19-266ENST00000641934 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
CASC19-266ENST00000641934 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
CASC19-266ENST00000641934 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
CASC19-266ENST00000641934 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
CASC19-266ENST00000641934 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
CASC19-266ENST00000641934 SMARCA2P51531 1590 aa14.46□□□□□ -0.09
CASC19-266ENST00000641934 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
CASC19-266ENST00000641934 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
CASC19-266ENST00000641934 SMARCA4P51532 1647 aa14.4□□□□□ -0.1
CASC19-266ENST00000641934 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
CASC19-266ENST00000641934 PEG3Q9GZU2 1588 aa14.36□□□□□ -0.11
CASC19-266ENST00000641934 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
CASC19-266ENST00000641934 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
CASC19-266ENST00000641934 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
CASC19-266ENST00000641934 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
CASC19-266ENST00000641934 CUX2O14529 1486 aa14.13□□□□□ -0.15
CASC19-266ENST00000641934 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
CASC19-266ENST00000641934 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
CASC19-266ENST00000641934 WIZO95785 1651 aa13.99□□□□□ -0.17
CASC19-266ENST00000641934 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
CASC19-266ENST00000641934 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.17
CASC19-266ENST00000641934 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
CASC19-266ENST00000641934 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
CASC19-266ENST00000641934 NESP48681 1621 aa13.91□□□□□ -0.18
CASC19-266ENST00000641934 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
CASC19-266ENST00000641934 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
CASC19-266ENST00000641934 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
CASC19-266ENST00000641934 CFTRP13569 1480 aa13.85□□□□□ -0.19
CASC19-266ENST00000641934 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
CASC19-266ENST00000641934 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
CASC19-266ENST00000641934 WDR62O43379 1518 aa13.8□□□□□ -0.2
CASC19-266ENST00000641934 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
CASC19-266ENST00000641934 FANCD2Q9BXW9 1451 aa13.77□□□□□ -0.21
CASC19-266ENST00000641934 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
CASC19-266ENST00000641934 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
CASC19-266ENST00000641934 CCDC88BA6NC98 1476 aa13.68□□□□□ -0.22
CASC19-266ENST00000641934 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
CASC19-266ENST00000641934 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
CASC19-266ENST00000641934 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
CASC19-266ENST00000641934 WDR97A6NE52 1622 aa13.54□□□□□ -0.24
CASC19-266ENST00000641934 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
CASC19-266ENST00000641934 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
CASC19-266ENST00000641934 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
CASC19-266ENST00000641934 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
CASC19-266ENST00000641934 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
CASC19-266ENST00000641934 SOGA1O94964 1423 aa13.34□□□□□ -0.27
CASC19-266ENST00000641934 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
CASC19-266ENST00000641934 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
CASC19-266ENST00000641934 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
CASC19-266ENST00000641934 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
CASC19-266ENST00000641934 CUX1P39880 1505 aa13.29□□□□□ -0.28
CASC19-266ENST00000641934 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
CASC19-266ENST00000641934 CHD1O14646 1710 aa13.27□□□□□ -0.28
CASC19-266ENST00000641934 GRIN2BQ13224 1484 aa13.27□□□□□ -0.29
CASC19-266ENST00000641934 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
CASC19-266ENST00000641934 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
CASC19-266ENST00000641934 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
CASC19-266ENST00000641934 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.293e-6■■■■□ 24.7
CASC19-266ENST00000641934 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
CASC19-266ENST00000641934 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
CASC19-266ENST00000641934 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
CASC19-266ENST00000641934 SYNJ2O15056 1496 aa13.21□□□□□ -0.3
CASC19-266ENST00000641934 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.3
CASC19-266ENST00000641934 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.3
CASC19-266ENST00000641934 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
CASC19-266ENST00000641934 RIMBP3CA6NJZ7 1639 aa13.18□□□□□ -0.3
CASC19-266ENST00000641934 RIMBP3BA6NNM3 1639 aa13.18□□□□□ -0.3
CASC19-266ENST00000641934 RIMBP3Q9UFD9 1639 aa13.18□□□□□ -0.3
CASC19-266ENST00000641934 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
CASC19-266ENST00000641934 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
CASC19-266ENST00000641934 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
CASC19-266ENST00000641934 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
CASC19-266ENST00000641934 FBLN2P98095 1184 aa13.14□□□□□ -0.31
CASC19-266ENST00000641934 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
CASC19-266ENST00000641934 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
CASC19-266ENST00000641934 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
CASC19-266ENST00000641934 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
CASC19-266ENST00000641934 GRIN2AQ12879 1464 aa13.06□□□□□ -0.32
CASC19-266ENST00000641934 CUL7Q14999 1698 aa13.04□□□□□ -0.32
CASC19-266ENST00000641934 NUP160Q12769 1436 aa13.02□□□□□ -0.33
CASC19-266ENST00000641934 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
CASC19-266ENST00000641934 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
CASC19-266ENST00000641934 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
CASC19-266ENST00000641934 CYB5RLQ6IPT4 315 aa12.98□□□□□ -0.33
CASC19-266ENST00000641934 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms