RNA–Protein interactions for RNA: ENST00000641786.1

CASC19-257, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-257ENST00000641786 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
CASC19-257ENST00000641786 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
CASC19-257ENST00000641786 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
CASC19-257ENST00000641786 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
CASC19-257ENST00000641786 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
CASC19-257ENST00000641786 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
CASC19-257ENST00000641786 FOXD1Q16676 465 aa15.31■□□□□ 0.04
CASC19-257ENST00000641786 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
CASC19-257ENST00000641786 ABCC9O60706 1549 aa14.75□□□□□ -0.05
CASC19-257ENST00000641786 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
CASC19-257ENST00000641786 PLPPR3Q6T4P5 718 aa14.72□□□□□ -0.05
CASC19-257ENST00000641786 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
CASC19-257ENST00000641786 NACADO15069 1562 aa14.54□□□□□ -0.08
CASC19-257ENST00000641786 RB1CC1Q8TDY2 1594 aa14.44□□□□□ -0.1
CASC19-257ENST00000641786 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
CASC19-257ENST00000641786 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
CASC19-257ENST00000641786 ADRA2BP18089 450 aa14.38□□□□□ -0.11
CASC19-257ENST00000641786 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
CASC19-257ENST00000641786 SCRIBQ14160 1630 aa14.27□□□□□ -0.12
CASC19-257ENST00000641786 MSH5O43196 834 aa14.25□□□□□ -0.13
CASC19-257ENST00000641786 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
CASC19-257ENST00000641786 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
CASC19-257ENST00000641786 BICRAQ9NZM4 1560 aa14.01□□□□□ -0.17
CASC19-257ENST00000641786 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
CASC19-257ENST00000641786 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
CASC19-257ENST00000641786 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
CASC19-257ENST00000641786 BAZ1AQ9NRL2 1556 aaPredicted RBP13.74□□□□□ -0.21
CASC19-257ENST00000641786 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
CASC19-257ENST00000641786 MROH2BQ7Z745 1585 aa13.69□□□□□ -0.22
CASC19-257ENST00000641786 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
CASC19-257ENST00000641786 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
CASC19-257ENST00000641786 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.23
CASC19-257ENST00000641786 WIZO95785 1651 aa13.58□□□□□ -0.24
CASC19-257ENST00000641786 SUPT5HO00267 1087 aaKnown RBP13.57□□□□□ -0.24
CASC19-257ENST00000641786 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
CASC19-257ENST00000641786 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
CASC19-257ENST00000641786 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
CASC19-257ENST00000641786 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
CASC19-257ENST00000641786 CC2D2AQ9P2K1 1620 aa13.41□□□□□ -0.26
CASC19-257ENST00000641786 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
CASC19-257ENST00000641786 NCAPD3P42695 1498 aa13.38□□□□□ -0.27
CASC19-257ENST00000641786 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
CASC19-257ENST00000641786 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
CASC19-257ENST00000641786 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
CASC19-257ENST00000641786 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
CASC19-257ENST00000641786 CFTRP13569 1480 aa13.05□□□□□ -0.32
CASC19-257ENST00000641786 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
CASC19-257ENST00000641786 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
CASC19-257ENST00000641786 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
CASC19-257ENST00000641786 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
CASC19-257ENST00000641786 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
CASC19-257ENST00000641786 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
CASC19-257ENST00000641786 NESP48681 1621 aa12.92□□□□□ -0.34
CASC19-257ENST00000641786 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
CASC19-257ENST00000641786 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
CASC19-257ENST00000641786 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
CASC19-257ENST00000641786 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
CASC19-257ENST00000641786 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
CASC19-257ENST00000641786 KIF21AQ7Z4S6 1674 aa12.85□□□□□ -0.35
CASC19-257ENST00000641786 CUX1P39880 1505 aa12.83□□□□□ -0.36
CASC19-257ENST00000641786 PDS5BQ9NTI5 1447 aa12.82□□□□□ -0.36
CASC19-257ENST00000641786 CEP164Q9UPV0 1460 aa12.82□□□□□ -0.36
CASC19-257ENST00000641786 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
CASC19-257ENST00000641786 DNMBPQ6XZF7 1577 aa12.78□□□□□ -0.36
CASC19-257ENST00000641786 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
CASC19-257ENST00000641786 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
CASC19-257ENST00000641786 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
CASC19-257ENST00000641786 THOC2Q8NI27 1593 aaKnown RBP12.71□□□□□ -0.37
CASC19-257ENST00000641786 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
CASC19-257ENST00000641786 WDR62O43379 1518 aa12.69□□□□□ -0.38
CASC19-257ENST00000641786 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
CASC19-257ENST00000641786 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
CASC19-257ENST00000641786 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
CASC19-257ENST00000641786 EEA1Q15075 1411 aa12.66□□□□□ -0.38
CASC19-257ENST00000641786 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
CASC19-257ENST00000641786 SOGA1O94964 1423 aa12.62□□□□□ -0.39
CASC19-257ENST00000641786 ABCA10Q8WWZ4 1543 aa12.6□□□□□ -0.39
CASC19-257ENST00000641786 RUSC2Q8N2Y8 1516 aa12.59□□□□□ -0.39
CASC19-257ENST00000641786 TARBP1Q13395 1621 aaKnown RBP12.59□□□□□ -0.39
CASC19-257ENST00000641786 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
CASC19-257ENST00000641786 ABCA5Q8WWZ7 1642 aa12.57□□□□□ -0.4
CASC19-257ENST00000641786 RAD54L2Q9Y4B4 1467 aa12.57□□□□□ -0.4
CASC19-257ENST00000641786 KIF27Q86VH2 1401 aa12.56□□□□□ -0.4
CASC19-257ENST00000641786 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
CASC19-257ENST00000641786 CUX2O14529 1486 aa12.56□□□□□ -0.4
CASC19-257ENST00000641786 KIF21BO75037 1637 aa12.55□□□□□ -0.4
CASC19-257ENST00000641786 IFT140Q96RY7 1462 aa12.53□□□□□ -0.4
CASC19-257ENST00000641786 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
CASC19-257ENST00000641786 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
CASC19-257ENST00000641786 PBRM1Q86U86 1689 aa12.49□□□□□ -0.41
CASC19-257ENST00000641786 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
CASC19-257ENST00000641786 CUL7Q14999 1698 aa12.48□□□□□ -0.41
CASC19-257ENST00000641786 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
CASC19-257ENST00000641786 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
CASC19-257ENST00000641786 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
CASC19-257ENST00000641786 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
CASC19-257ENST00000641786 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
CASC19-257ENST00000641786 GAPVD1Q14C86 1478 aa12.45□□□□□ -0.42
CASC19-257ENST00000641786 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
CASC19-257ENST00000641786 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms