RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
CASC19-230ENST00000641421 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
CASC19-230ENST00000641421 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
CASC19-230ENST00000641421 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
CASC19-230ENST00000641421 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
CASC19-230ENST00000641421 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
CASC19-230ENST00000641421 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
CASC19-230ENST00000641421 ABCC9O60706 1549 aa18.94■□□□□ 0.62
CASC19-230ENST00000641421 NACADO15069 1562 aa18.8■□□□□ 0.6
CASC19-230ENST00000641421 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
CASC19-230ENST00000641421 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
CASC19-230ENST00000641421 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
CASC19-230ENST00000641421 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
CASC19-230ENST00000641421 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
CASC19-230ENST00000641421 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
CASC19-230ENST00000641421 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
CASC19-230ENST00000641421 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
CASC19-230ENST00000641421 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
CASC19-230ENST00000641421 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
CASC19-230ENST00000641421 WIZO95785 1651 aa17.96■□□□□ 0.47
CASC19-230ENST00000641421 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
CASC19-230ENST00000641421 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
CASC19-230ENST00000641421 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
CASC19-230ENST00000641421 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
CASC19-230ENST00000641421 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
CASC19-230ENST00000641421 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
CASC19-230ENST00000641421 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
CASC19-230ENST00000641421 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.4
CASC19-230ENST00000641421 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
CASC19-230ENST00000641421 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
CASC19-230ENST00000641421 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
CASC19-230ENST00000641421 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
CASC19-230ENST00000641421 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
CASC19-230ENST00000641421 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
CASC19-230ENST00000641421 FAM9AQ8IZU1 332 aaPredicted RBP17.33■□□□□ 0.37
CASC19-230ENST00000641421 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
CASC19-230ENST00000641421 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
CASC19-230ENST00000641421 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
CASC19-230ENST00000641421 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
CASC19-230ENST00000641421 EEA1Q15075 1411 aa17.09■□□□□ 0.33
CASC19-230ENST00000641421 SOGA1O94964 1423 aa17.09■□□□□ 0.33
CASC19-230ENST00000641421 CFTRP13569 1480 aa17.05■□□□□ 0.32
CASC19-230ENST00000641421 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
CASC19-230ENST00000641421 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
CASC19-230ENST00000641421 TOP2BQ02880 1626 aa17■□□□□ 0.31
CASC19-230ENST00000641421 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
CASC19-230ENST00000641421 PCGF6Q9BYE7 350 aa16.96■□□□□ 0.3
CASC19-230ENST00000641421 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
CASC19-230ENST00000641421 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
CASC19-230ENST00000641421 CUX1P39880 1505 aa16.9■□□□□ 0.3
CASC19-230ENST00000641421 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
CASC19-230ENST00000641421 GOLGA3Q08378 1498 aa16.89■□□□□ 0.29
CASC19-230ENST00000641421 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
CASC19-230ENST00000641421 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
CASC19-230ENST00000641421 KIF21BO75037 1637 aa16.85■□□□□ 0.29
CASC19-230ENST00000641421 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
CASC19-230ENST00000641421 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
CASC19-230ENST00000641421 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.27
CASC19-230ENST00000641421 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
CASC19-230ENST00000641421 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
CASC19-230ENST00000641421 NESP48681 1621 aa16.71■□□□□ 0.27
CASC19-230ENST00000641421 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
CASC19-230ENST00000641421 HRCP23327 699 aa16.7■□□□□ 0.26
CASC19-230ENST00000641421 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
CASC19-230ENST00000641421 ERICH3Q5RHP9 1530 aa16.68■□□□□ 0.26
CASC19-230ENST00000641421 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
CASC19-230ENST00000641421 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
CASC19-230ENST00000641421 CUX2O14529 1486 aa16.64■□□□□ 0.25
CASC19-230ENST00000641421 CLIP1P30622 1438 aa16.64■□□□□ 0.25
CASC19-230ENST00000641421 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
CASC19-230ENST00000641421 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
CASC19-230ENST00000641421 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
CASC19-230ENST00000641421 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
CASC19-230ENST00000641421 IGF1RP08069 1367 aa16.57■□□□□ 0.24
CASC19-230ENST00000641421 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
CASC19-230ENST00000641421 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
CASC19-230ENST00000641421 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
CASC19-230ENST00000641421 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
CASC19-230ENST00000641421 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
CASC19-230ENST00000641421 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
CASC19-230ENST00000641421 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
CASC19-230ENST00000641421 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
CASC19-230ENST00000641421 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
CASC19-230ENST00000641421 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
CASC19-230ENST00000641421 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
CASC19-230ENST00000641421 APLP2Q06481 763 aa16.41■□□□□ 0.22
CASC19-230ENST00000641421 CUL7Q14999 1698 aa16.37■□□□□ 0.21
CASC19-230ENST00000641421 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
CASC19-230ENST00000641421 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
CASC19-230ENST00000641421 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
CASC19-230ENST00000641421 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
CASC19-230ENST00000641421 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
CASC19-230ENST00000641421 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.21
CASC19-230ENST00000641421 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
CASC19-230ENST00000641421 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
CASC19-230ENST00000641421 WDR62O43379 1518 aa16.24■□□□□ 0.19
CASC19-230ENST00000641421 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
CASC19-230ENST00000641421 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
CASC19-230ENST00000641421 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
CASC19-230ENST00000641421 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms