RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 AEBP2Q6ZN18 517 aaPredicted RBP34.19■■■■□ 3.06
CASC19-229ENST00000641418 CHIC1Q5VXU3 224 aa33.84■■■■□ 3.01
CASC19-229ENST00000641418 PHF23Q9BUL5 403 aaPredicted RBP29.7■■■□□ 2.35
CASC19-229ENST00000641418 SENP3Q9H4L4 574 aaPredicted RBP29.14■■■□□ 2.26
CASC19-229ENST00000641418 PLPPR3Q6T4P5 718 aa27.72■■■□□ 2.03
CASC19-229ENST00000641418 FOXD1Q16676 465 aa26.88■■□□□ 1.89
CASC19-229ENST00000641418 ADRA2BP18089 450 aa26.11■■□□□ 1.77
CASC19-229ENST00000641418 PPP6R1Q9UPN7 881 aa26.08■■□□□ 1.77
CASC19-229ENST00000641418 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
CASC19-229ENST00000641418 PIAS4Q8N2W9 510 aaPredicted RBP25.49■■□□□ 1.67
CASC19-229ENST00000641418 MSH5O43196 834 aa24.8■■□□□ 1.56
CASC19-229ENST00000641418 PPP4R3CPQ6ZMV5 832 aa24.4■■□□□ 1.5
CASC19-229ENST00000641418 KCNA4P22459 653 aa24.14■■□□□ 1.45
CASC19-229ENST00000641418 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
CASC19-229ENST00000641418 NCBP3Q53F19 620 aaKnown RBP23.99■■□□□ 1.43
CASC19-229ENST00000641418 CNKSR2Q8WXI2 1034 aa23.7■■□□□ 1.38
CASC19-229ENST00000641418 MAPK8IP2Q13387 824 aaPredicted RBP23.55■■□□□ 1.36
CASC19-229ENST00000641418 NPM3O75607 178 aaKnown RBP23.48■■□□□ 1.35
CASC19-229ENST00000641418 DMRT2Q9Y5R5 561 aa23.27■■□□□ 1.32
CASC19-229ENST00000641418 ABCC9O60706 1549 aa23.23■■□□□ 1.31
CASC19-229ENST00000641418 RNF216Q9NWF9 866 aaPredicted RBP23.14■■□□□ 1.3
CASC19-229ENST00000641418 CCDC180Q9P1Z9 1646 aa23.14■■□□□ 1.3
CASC19-229ENST00000641418 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
CASC19-229ENST00000641418 HOXD11P31277 338 aaPredicted RBP22.92■■□□□ 1.26
CASC19-229ENST00000641418 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
CASC19-229ENST00000641418 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
CASC19-229ENST00000641418 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
CASC19-229ENST00000641418 DCAF8L1A6NGE4 600 aa22.25■■□□□ 1.15
CASC19-229ENST00000641418 FOXD4L1Q9NU39 408 aa22.22■■□□□ 1.15
CASC19-229ENST00000641418 ZBTB22O15209 634 aa22.15■■□□□ 1.14
CASC19-229ENST00000641418 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
CASC19-229ENST00000641418 SLC4A2P04920 1241 aa22.03■■□□□ 1.12
CASC19-229ENST00000641418 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
CASC19-229ENST00000641418 NACADO15069 1562 aa21.98■■□□□ 1.11
CASC19-229ENST00000641418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.89■■□□□ 1.1
CASC19-229ENST00000641418 POTEDQ86YR6 584 aa21.86■■□□□ 1.09
CASC19-229ENST00000641418 MYCNP04198 464 aaPredicted RBP21.77■■□□□ 1.08
CASC19-229ENST00000641418 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
CASC19-229ENST00000641418 MYO15BQ96JP2 1530 aa21.72■■□□□ 1.07
CASC19-229ENST00000641418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
CASC19-229ENST00000641418 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
CASC19-229ENST00000641418 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
CASC19-229ENST00000641418 ATXN8OSP0DMR3 200 aa21.49■■□□□ 1.03
CASC19-229ENST00000641418 U3KPZ7 1027 aaPredicted RBP21.48■■□□□ 1.03
CASC19-229ENST00000641418 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
CASC19-229ENST00000641418 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
CASC19-229ENST00000641418 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
CASC19-229ENST00000641418 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
CASC19-229ENST00000641418 APLP2Q06481 763 aa21.27■■□□□ 1
CASC19-229ENST00000641418 RNF39Q9H2S5 420 aa21.21■□□□□ 0.99
CASC19-229ENST00000641418 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
CASC19-229ENST00000641418 SCRIBQ14160 1630 aa21.14■□□□□ 0.98
CASC19-229ENST00000641418 C1QBPQ07021 282 aaKnown RBP21.06■□□□□ 0.96
CASC19-229ENST00000641418 ATF5Q9Y2D1 282 aaPredicted RBP20.99■□□□□ 0.95
CASC19-229ENST00000641418 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
CASC19-229ENST00000641418 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
CASC19-229ENST00000641418 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
CASC19-229ENST00000641418 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
CASC19-229ENST00000641418 CAPN15O75808 1086 aa20.75■□□□□ 0.91
CASC19-229ENST00000641418 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
CASC19-229ENST00000641418 TRHP20396 242 aaPredicted RBP20.72■□□□□ 0.91
CASC19-229ENST00000641418 POLA2Q14181 598 aa20.46■□□□□ 0.87
CASC19-229ENST00000641418 CACNB1Q02641 598 aaPredicted RBP20.45■□□□□ 0.86
CASC19-229ENST00000641418 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
CASC19-229ENST00000641418 FBLN2P98095 1184 aa20.31■□□□□ 0.84
CASC19-229ENST00000641418 ABCB7O75027 752 aa20.3■□□□□ 0.84
CASC19-229ENST00000641418 DSG3P32926 999 aa20.29■□□□□ 0.84
CASC19-229ENST00000641418 ZBTB12Q9Y330 459 aaPredicted RBP20.29■□□□□ 0.84
CASC19-229ENST00000641418 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
CASC19-229ENST00000641418 FKBP8Q14318 412 aa20.25■□□□□ 0.83
CASC19-229ENST00000641418 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
CASC19-229ENST00000641418 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
CASC19-229ENST00000641418 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
CASC19-229ENST00000641418 MKRN4PQ13434 485 aaPredicted RBP20.12■□□□□ 0.81
CASC19-229ENST00000641418 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
CASC19-229ENST00000641418 ERCC6Q03468 1493 aa20.07■□□□□ 0.8
CASC19-229ENST00000641418 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
CASC19-229ENST00000641418 DNAJC5Q9H3Z4 198 aa20.02■□□□□ 0.8
CASC19-229ENST00000641418 CUX2O14529 1486 aa20.01■□□□□ 0.79
CASC19-229ENST00000641418 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
CASC19-229ENST00000641418 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
CASC19-229ENST00000641418 NESP48681 1621 aa19.96■□□□□ 0.79
CASC19-229ENST00000641418 SPDYE4A6NLX3 237 aa19.95■□□□□ 0.78
CASC19-229ENST00000641418 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
CASC19-229ENST00000641418 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
CASC19-229ENST00000641418 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
CASC19-229ENST00000641418 SPDYE2BA6NHP3 402 aa19.7■□□□□ 0.74
CASC19-229ENST00000641418 SPDYE6P0CI01 402 aa19.7■□□□□ 0.74
CASC19-229ENST00000641418 SPDYE2Q495Y8 402 aa19.7■□□□□ 0.74
CASC19-229ENST00000641418 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
CASC19-229ENST00000641418 WIZO95785 1651 aa19.69■□□□□ 0.74
CASC19-229ENST00000641418 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
CASC19-229ENST00000641418 ZNF692Q9BU19 519 aaPredicted RBP19.66■□□□□ 0.74
CASC19-229ENST00000641418 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
CASC19-229ENST00000641418 PROM2Q8N271 834 aa19.63■□□□□ 0.73
CASC19-229ENST00000641418 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
CASC19-229ENST00000641418 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
CASC19-229ENST00000641418 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
CASC19-229ENST00000641418 SSUH2Q9Y2M2 353 aa19.51■□□□□ 0.71
CASC19-229ENST00000641418 CFTRP13569 1480 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms