RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 NISCHQ9Y2I1 1504 aa26.57■■□□□ 1.84
CASC19-272ENST00000641991 CCDC180Q9P1Z9 1646 aa23.22■■□□□ 1.31
CASC19-272ENST00000641991 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
CASC19-272ENST00000641991 ABCC9O60706 1549 aa22.01■■□□□ 1.11
CASC19-272ENST00000641991 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
CASC19-272ENST00000641991 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
CASC19-272ENST00000641991 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
CASC19-272ENST00000641991 NACADO15069 1562 aa21.66■■□□□ 1.06
CASC19-272ENST00000641991 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
CASC19-272ENST00000641991 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
CASC19-272ENST00000641991 SCRIBQ14160 1630 aa21.3■■□□□ 1
CASC19-272ENST00000641991 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
CASC19-272ENST00000641991 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
CASC19-272ENST00000641991 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
CASC19-272ENST00000641991 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.89
CASC19-272ENST00000641991 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
CASC19-272ENST00000641991 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
CASC19-272ENST00000641991 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.87
CASC19-272ENST00000641991 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.87
CASC19-272ENST00000641991 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
CASC19-272ENST00000641991 WIZO95785 1651 aa20.29■□□□□ 0.84
CASC19-272ENST00000641991 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
CASC19-272ENST00000641991 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
CASC19-272ENST00000641991 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
CASC19-272ENST00000641991 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.82
CASC19-272ENST00000641991 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
CASC19-272ENST00000641991 NCAPD3P42695 1498 aa20■□□□□ 0.79
CASC19-272ENST00000641991 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
CASC19-272ENST00000641991 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
CASC19-272ENST00000641991 CC2D2AQ9P2K1 1620 aa19.92■□□□□ 0.78
CASC19-272ENST00000641991 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
CASC19-272ENST00000641991 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
CASC19-272ENST00000641991 CFTRP13569 1480 aa19.52■□□□□ 0.71
CASC19-272ENST00000641991 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
CASC19-272ENST00000641991 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
CASC19-272ENST00000641991 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
CASC19-272ENST00000641991 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
CASC19-272ENST00000641991 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
CASC19-272ENST00000641991 PRDM2Q13029 1718 aa19.33■□□□□ 0.69
CASC19-272ENST00000641991 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
CASC19-272ENST00000641991 NESP48681 1621 aa19.3■□□□□ 0.68
CASC19-272ENST00000641991 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
CASC19-272ENST00000641991 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
CASC19-272ENST00000641991 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
CASC19-272ENST00000641991 CUX1P39880 1505 aa19.2■□□□□ 0.66
CASC19-272ENST00000641991 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
CASC19-272ENST00000641991 PDS5BQ9NTI5 1447 aa19.15■□□□□ 0.66
CASC19-272ENST00000641991 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
CASC19-272ENST00000641991 SOGA1O94964 1423 aa19.06■□□□□ 0.64
CASC19-272ENST00000641991 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
CASC19-272ENST00000641991 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
CASC19-272ENST00000641991 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
CASC19-272ENST00000641991 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
CASC19-272ENST00000641991 EEA1Q15075 1411 aa19.02■□□□□ 0.64
CASC19-272ENST00000641991 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
CASC19-272ENST00000641991 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
CASC19-272ENST00000641991 RUSC2Q8N2Y8 1516 aa18.99■□□□□ 0.63
CASC19-272ENST00000641991 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
CASC19-272ENST00000641991 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
CASC19-272ENST00000641991 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
CASC19-272ENST00000641991 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
CASC19-272ENST00000641991 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
CASC19-272ENST00000641991 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
CASC19-272ENST00000641991 WDR62O43379 1518 aa18.85■□□□□ 0.61
CASC19-272ENST00000641991 CUX2O14529 1486 aa18.84■□□□□ 0.61
CASC19-272ENST00000641991 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
CASC19-272ENST00000641991 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
CASC19-272ENST00000641991 THOC2Q8NI27 1593 aaKnown RBP18.82■□□□□ 0.6
CASC19-272ENST00000641991 KIF21BO75037 1637 aa18.79■□□□□ 0.6
CASC19-272ENST00000641991 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
CASC19-272ENST00000641991 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
CASC19-272ENST00000641991 GOLGA3Q08378 1498 aa18.75■□□□□ 0.59
CASC19-272ENST00000641991 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
CASC19-272ENST00000641991 IGF1RP08069 1367 aa18.71■□□□□ 0.59
CASC19-272ENST00000641991 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
CASC19-272ENST00000641991 ABCA5Q8WWZ7 1642 aa18.7■□□□□ 0.58
CASC19-272ENST00000641991 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
CASC19-272ENST00000641991 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
CASC19-272ENST00000641991 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
CASC19-272ENST00000641991 TNIKQ9UKE5 1360 aa18.67■□□□□ 0.58
CASC19-272ENST00000641991 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
CASC19-272ENST00000641991 GAPVD1Q14C86 1478 aa18.64■□□□□ 0.57
CASC19-272ENST00000641991 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
CASC19-272ENST00000641991 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
CASC19-272ENST00000641991 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
CASC19-272ENST00000641991 CUL7Q14999 1698 aa18.57■□□□□ 0.56
CASC19-272ENST00000641991 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
CASC19-272ENST00000641991 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.563e-6■■■■□ 24.7
CASC19-272ENST00000641991 GRIN2BQ13224 1484 aa18.52■□□□□ 0.56
CASC19-272ENST00000641991 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
CASC19-272ENST00000641991 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
CASC19-272ENST00000641991 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
CASC19-272ENST00000641991 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
CASC19-272ENST00000641991 CLIP1P30622 1438 aa18.44■□□□□ 0.54
CASC19-272ENST00000641991 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
CASC19-272ENST00000641991 MAGI1Q96QZ7 1491 aaPredicted RBP18.39■□□□□ 0.53
CASC19-272ENST00000641991 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
CASC19-272ENST00000641991 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
CASC19-272ENST00000641991 GRIN2AQ12879 1464 aa18.3■□□□□ 0.52
CASC19-272ENST00000641991 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms