RNA–Protein interactions for RNA: ENST00000641029.1

CASC19-207, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,047 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-207ENST00000641029 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
CASC19-207ENST00000641029 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
CASC19-207ENST00000641029 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
CASC19-207ENST00000641029 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
CASC19-207ENST00000641029 FOXD1Q16676 465 aa23.55■■□□□ 1.36
CASC19-207ENST00000641029 MSH5O43196 834 aa22.1■■□□□ 1.13
CASC19-207ENST00000641029 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
CASC19-207ENST00000641029 POTEDQ86YR6 584 aa22.03■■□□□ 1.12
CASC19-207ENST00000641029 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
CASC19-207ENST00000641029 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
CASC19-207ENST00000641029 ADRA2BP18089 450 aa21.74■■□□□ 1.07
CASC19-207ENST00000641029 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
CASC19-207ENST00000641029 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
CASC19-207ENST00000641029 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
CASC19-207ENST00000641029 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
CASC19-207ENST00000641029 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
CASC19-207ENST00000641029 CACNB1Q02641 598 aaPredicted RBP19.12■□□□□ 0.65
CASC19-207ENST00000641029 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
CASC19-207ENST00000641029 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
CASC19-207ENST00000641029 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
CASC19-207ENST00000641029 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
CASC19-207ENST00000641029 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
CASC19-207ENST00000641029 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
CASC19-207ENST00000641029 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
CASC19-207ENST00000641029 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
CASC19-207ENST00000641029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
CASC19-207ENST00000641029 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
CASC19-207ENST00000641029 KCNA4P22459 653 aa17.66■□□□□ 0.42
CASC19-207ENST00000641029 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
CASC19-207ENST00000641029 CAPN15O75808 1086 aa17.58■□□□□ 0.4
CASC19-207ENST00000641029 DSG3P32926 999 aa17.58■□□□□ 0.4
CASC19-207ENST00000641029 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
CASC19-207ENST00000641029 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
CASC19-207ENST00000641029 APLP2Q06481 763 aa17.23■□□□□ 0.35
CASC19-207ENST00000641029 POTEHQ6S545 545 aa17.21■□□□□ 0.35
CASC19-207ENST00000641029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
CASC19-207ENST00000641029 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
CASC19-207ENST00000641029 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
CASC19-207ENST00000641029 ABCB7O75027 752 aa17.14■□□□□ 0.33
CASC19-207ENST00000641029 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
CASC19-207ENST00000641029 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
CASC19-207ENST00000641029 POLA2Q14181 598 aa16.75■□□□□ 0.27
CASC19-207ENST00000641029 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
CASC19-207ENST00000641029 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
CASC19-207ENST00000641029 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
CASC19-207ENST00000641029 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
CASC19-207ENST00000641029 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
CASC19-207ENST00000641029 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
CASC19-207ENST00000641029 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
CASC19-207ENST00000641029 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
CASC19-207ENST00000641029 ZBTB22O15209 634 aa16.24■□□□□ 0.19
CASC19-207ENST00000641029 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
CASC19-207ENST00000641029 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
CASC19-207ENST00000641029 ATXN8OSP0DMR3 200 aa16.08■□□□□ 0.16
CASC19-207ENST00000641029 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
CASC19-207ENST00000641029 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
CASC19-207ENST00000641029 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
CASC19-207ENST00000641029 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
CASC19-207ENST00000641029 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
CASC19-207ENST00000641029 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
CASC19-207ENST00000641029 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
CASC19-207ENST00000641029 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CASC19-207ENST00000641029 HAX1O00165 279 aa15.83■□□□□ 0.12
CASC19-207ENST00000641029 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
CASC19-207ENST00000641029 EVX2Q03828 476 aa15.66■□□□□ 0.1
CASC19-207ENST00000641029 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
CASC19-207ENST00000641029 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
CASC19-207ENST00000641029 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
CASC19-207ENST00000641029 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
CASC19-207ENST00000641029 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
CASC19-207ENST00000641029 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
CASC19-207ENST00000641029 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
CASC19-207ENST00000641029 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
CASC19-207ENST00000641029 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
CASC19-207ENST00000641029 GABBR2O75899 941 aa15.27■□□□□ 0.04
CASC19-207ENST00000641029 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
CASC19-207ENST00000641029 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
CASC19-207ENST00000641029 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
CASC19-207ENST00000641029 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
CASC19-207ENST00000641029 LHX8Q68G74 356 aa15.02■□□□□ -0
CASC19-207ENST00000641029 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
CASC19-207ENST00000641029 CLCN6P51797 869 aa14.94□□□□□ -0.02
CASC19-207ENST00000641029 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
CASC19-207ENST00000641029 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
CASC19-207ENST00000641029 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
CASC19-207ENST00000641029 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.04
CASC19-207ENST00000641029 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
CASC19-207ENST00000641029 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
CASC19-207ENST00000641029 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
CASC19-207ENST00000641029 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
CASC19-207ENST00000641029 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
CASC19-207ENST00000641029 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
CASC19-207ENST00000641029 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
CASC19-207ENST00000641029 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
CASC19-207ENST00000641029 PROM2Q8N271 834 aa14.48□□□□□ -0.09
CASC19-207ENST00000641029 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
CASC19-207ENST00000641029 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
CASC19-207ENST00000641029 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
CASC19-207ENST00000641029 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
CASC19-207ENST00000641029 ASTLQ6HA08 431 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms